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ATCC64974_78750-T1, ATCC64974_78750-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_78750-T1
Unique NameATCC64974_78750-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:1637695..1638717+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_78750-T1 ID=ATCC64974_78750-T1|Name=ATCC64974_78750-T1|organism=Aspergillus niger N402|type=mRNA|length=1023bp|location=Sequence derived from alignment at OGUI01000013.1:1637695..1638717+ (Aspergillus niger N402)
ATGCCCACCCTCCAAACCAGCACCCTCGCCTTCCTCGGCGGCGGCAACAT
GGCCTCAGCCATCATCTCCGGCCTGCTGCGCCAATCCGTGCCCGCAACCA
ACATCCACGTCTCCGAGCCGTGGGAAGTCAACCGGAACAAGATCGCCGCA
CTGGGCGTAAACACCACGACATCCAACACCGAGGCCGCCTCCGCCGCCGA
CGTCGTCATTCTGGCCGTGAAGCCGCAAGTTGCGAAGACCGTGTGCGAGG
AACTCCGTCAGGAATGGACGGCCACGGCGCGGGAGAAGTTCCCGATTGTG
GTGAGCATTGCGGCGGGAATCACGTTGGAGAGTTTGCAGAAATGGTTGAG
TGTTGAGGGTGGGAAGGTGGCGCCGGTGGTGAGGGTGATGCCGAATACGC
CGGCGTTGGTGACGGAGGGAGCTAGTGGTGCGTTTGCCGGGGTGGAGGTT
AGTAAGGAGGATAAGGGGTTGGTTGAGGCGTTGTTGGGTAGTGTGAGTCG
GGTTACGGAGTGGGTGGATAAGGAGGAGTTGTTGGATGTTGTTACGGGGC
TGTCTGGTATGTCTTTCTCTTTCACTTTCTCTTTCACTTTCTCTTTCACT
TTCTCTTTCACTTTCTCTTTCACTTTCTCTTTCACTTTCTCTTTCACTTT
CTCTTTCTATGTTTCTGTCTATTGTCTACTTGGAAGGGGGATGGTGAGGC
TAATGTTTGGTGTGATAGGATCCGGTCCGGCGTATTTCTTCGCTATGGTT
GAGCATCTTGTTGCTAGTGCGACTGCTCTCGGTTTGACGAAGGAGCAGGC
TACGAGGCTGGCGGCGCAGACTTGTCTCGGTGCTGGAAAGATGCTCGTTG
AGTCGGATGATGAGCCCGCACAGCTGAGGAAGAACGTTACTAGTCCGAAT
GGCACGACGTATGCCGCGTTGCAGACTTTTGAGAAGCTGAACTTTGCGGA
TATCGTGGATCAGGCGGTTAAGGCGGCGACGGATAGAGCTGCGGAGTTGG
GTGAGAGCTTGGGAAAGCAGTAA
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Coding sequence (CDS) from alignment at OGUI01000013.1:1637695..1638717+

>ATCC64974_78750-T1 ID=ATCC64974_78750-T1|Name=ATCC64974_78750-T1|organism=Aspergillus niger N402|type=CDS|length=1722bp|location=Sequence derived from alignment at OGUI01000013.1:1637695..1638717+ (Aspergillus niger N402)
ATGCCCACCCTCCAAACCAGCACCCTCGCCTTCCTCGGCGGCGGCAACAT
GGCCTCAGCCATCATCTCCGGCCTGCTGCGCCAATCCGTGCCCGCAACCA
ACATCCACGTCTCCGAGCCGTGGGAAGTCAACCGGAACAAGATCGCCGCA
CTGGGCGTAAACACCACGACATCCAACACCGAGGCCGCCTCCGCCGCCGA
CGTCGTCATTCTGGCCGTGAAGCCGCAAGTTGCGAAGACCGTGTGCGAGG
AACTCCGTCAGGAATGGACGGCCACGGCGCGGGAGAAGTTCCCGATTGTG
GTGAGCATTGCGGCGGGAATCACGTTGGAGAGTTTGCAGAAATGGTTGAG
TGTTGAGGGTGGGAAGGTGGCGCCGGTGGTGAGGGTGATGCCGAATACGC
CGGCGTTGGTGACGGAGGGAGCTAGTGGTGCGTTTGCCGGGGTGGAGGTT
AGTAAGGAGGATAAGGGGTTGGTTGAGGCGTTGTTGGGTAGTGTGAGTCG
GGTTACGGAGTGGGTGGATAAGGAGGAGTTGTTGGATGTTGTTACGGGGC
TGTCTGGATCCGGTCCGGCGTATTTCTTCGCTATGGTTGAGCATCTTGTT
GCTAGTGCGACTGCTCTCGGTTTGACGAAGGAGCAGGCTACGAGGCTGGC
GGCGCAGACTTGTCTCGGTGCTGGAAAGATGCTCGTTGAGTCGGATGATG
AGCCCGCACAGCTGAGGAAGAACGTTACTAGTCCGAATGGCACGACGTAT
GCCGCGTTGCAGACTTTTGAGAAGCTGAACTTTGCGGATATCGTGGATCA
GGCGGTTAAGGCGGCGACGGATAGAGCTGCGGAGTTGGGTGAGAGCTTGG
GAAAGCAGTAAATGCCCACCCTCCAAACCAGCACCCTCGCCTTCCTCGGC
GGCGGCAACATGGCCTCAGCCATCATCTCCGGCCTGCTGCGCCAATCCGT
GCCCGCAACCAACATCCACGTCTCCGAGCCGTGGGAAGTCAACCGGAACA
AGATCGCCGCACTGGGCGTAAACACCACGACATCCAACACCGAGGCCGCC
TCCGCCGCCGACGTCGTCATTCTGGCCGTGAAGCCGCAAGTTGCGAAGAC
CGTGTGCGAGGAACTCCGTCAGGAATGGACGGCCACGGCGCGGGAGAAGT
TCCCGATTGTGGTGAGCATTGCGGCGGGAATCACGTTGGAGAGTTTGCAG
AAATGGTTGAGTGTTGAGGGTGGGAAGGTGGCGCCGGTGGTGAGGGTGAT
GCCGAATACGCCGGCGTTGGTGACGGAGGGAGCTAGTGGTGCGTTTGCCG
GGGTGGAGGTTAGTAAGGAGGATAAGGGGTTGGTTGAGGCGTTGTTGGGT
AGTGTGAGTCGGGTTACGGAGTGGGTGGATAAGGAGGAGTTGTTGGATGT
TGTTACGGGGCTGTCTGGATCCGGTCCGGCGTATTTCTTCGCTATGGTTG
AGCATCTTGTTGCTAGTGCGACTGCTCTCGGTTTGACGAAGGAGCAGGCT
ACGAGGCTGGCGGCGCAGACTTGTCTCGGTGCTGGAAAGATGCTCGTTGA
GTCGGATGATGAGCCCGCACAGCTGAGGAAGAACGTTACTAGTCCGAATG
GCACGACGTATGCCGCGTTGCAGACTTTTGAGAAGCTGAACTTTGCGGAT
ATCGTGGATCAGGCGGTTAAGGCGGCGACGGATAGAGCTGCGGAGTTGGG
TGAGAGCTTGGGAAAGCAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006561proline biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004735pyrroline-5-carboxylate reductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_78750ATCC64974_78750Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_78750-T1.exon1ATCC64974_78750-T1.exon1Aspergillus niger N402exon
ATCC64974_78750-T1.exon2ATCC64974_78750-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_78750-T1.cdsATCC64974_78750-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_78750-T1ATCC64974_78750-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008927
DBxrefInterPro:IPR029036
DBxrefInterPro:IPR028939
DBxrefInterPro:IPR000304
DBxrefPFAM:PF14748
DBxrefPFAM:PF03807
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:1637695..1638717 +
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