You are here

Home

ATCC64974_78890-T1, ATCC64974_78890-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_78890-T1
Unique NameATCC64974_78890-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:1670815..1672486-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_78890-T1 ID=ATCC64974_78890-T1|Name=ATCC64974_78890-T1|organism=Aspergillus niger N402|type=mRNA|length=1672bp|location=Sequence derived from alignment at OGUI01000013.1:1670815..1672486- (Aspergillus niger N402)
ATGACCCACCTGAGCGCCGACTACATTGTCATCGGCGGCGGCACTGCCGG
TCTGGTGGTGGCCAACCGCCTGTCGGAAGACCCCGACGTCCAAGTGCTTG
TACTGGAGGCGGGACCGGACCGCAGCTCGGACGAGCGTGTTCAGGACCCG
GCGGCGTGGCCCACCCTGAGCGGATCCGAGATGGACTGGCAGTTCAAGAC
TGTACCGCAGGTGTGTGCGATCTCATGTCTATCGATTTCAATTCTGTCAG
TTATGGCAGCTAACTGCTGCGAGCCAGCCCGCCTTGAATAACCGCGACCA
AGACTACGCTGCGGGCCGGCTGCTGGGCGGTACCTCCGCCATCAACGGGC
TGGCGTTTGTGCCCCCCGCCCCGGCGGGCATCGACGCCTGGGAGGCGCTG
GGGAACCCCGGCTGGTCCTGGCAGTCGTTGGCCCCGTACTTTCACCGTAG
CTTTCACATCTGCCCCCAGTCTACTCCTGGCAATGGTCCTGGTGCTGCGG
CATCAGCCGCAGCTGGGCCCATTGAAGTCACTTATCCCGCACTGGCTGAA
CCGAGGAATCACACCATCATCGACGCCTGGAACAAGAGCTTTGCAGATAA
GGGCTACGCCTTCAGTGATACTCTGATCCCAACTCCCACCATCGGCACCC
GCCCCTACACAGCTACCATCACCACCACAGGCGTTCGGAGCGACAGCACT
CAGTATGCAGCATCGCGCCCCAACCTGCGCATCCTCGCCGACACCACGGT
CGAACGCATCCTCTTCGACACGACAACCACCACCATCACCGCCACGGGGG
TCCTCCTCCACAACGATCCCTCTCCCATCACCGCCACCAAAGAGGTGATC
CTCGCCGCGGGTGCCTTCAACACGCCTAAACTCCTCGAACTCTCCGGCAT
CGGCTCCGCATCCCGGCTCTCCACGCATGACATTCCCTGCATCATTGACA
ACCCTTCCGTTGGCGAAAATCTTCAGAACCACCTCATGGCCCTCCTTCCC
GTTCCCATCCAAGCCTCTTCGGATTCTGCCTCCCCAACCCCAGGCATTCA
AGCCATCTCTTTCGTCCGCTCGGGTGCTGAGGCCGACCTTCTCGCCCGTC
ACCCTCCCCTCCAGACCCCCCTCAACACCCTCCTCGCCAACCCCTCCGAA
CCCACAGCCTGCTTCTTCCTCAGCACGCTGCCCAACTCTATGGCCATTCT
CGGCTTGATCCCCTCCTACCCCCTCTCCCGCGGCTCCGTCCACCTCTCTT
CCTCCCAGCCCACTGACAAGCCCATTATCGACCCAGACTATCTGTCGCAC
CCCCTGGATCTCCCACTCATGGCAGAGCACTTCAAGACCCTTCACTCCCT
CCCAACCAGCCTTCCATTGAAGGAGCTCCTTGGCTCCGCGCCGGGCCCCA
GCCCTGAGACTCAGGATCCGGGTGTGGTGGAGGAGACGTTGAGGGCATCG
GTCGTGGCGGCGCATCATTTTTGCGGGACGGCCATCATGGCCCCGCGGGA
GAAGGGGGGTGTGGTTGATAGCAATCTGCGGGTTTATGGGACCGGTAACT
TGAGAATCGTCGATGCCAGTGTATTCCCTATCGTGACGGCAGCGAATCCC
ATGTCGACGGTGTATGCTGTTGCGGAGCGAGCGGCGGAGCTTATCCGGGG
AAGGGCAGGACATTCCGTGTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000013.1:1670815..1672486-

>ATCC64974_78890-T1 ID=ATCC64974_78890-T1|Name=ATCC64974_78890-T1|organism=Aspergillus niger N402|type=CDS|length=3210bp|location=Sequence derived from alignment at OGUI01000013.1:1670815..1672486- (Aspergillus niger N402)
CCCGCCTTGAATAACCGCGACCAAGACTACGCTGCGGGCCGGCTGCTGGG
CGGTACCTCCGCCATCAACGGGCTGGCGTTTGTGCCCCCCGCCCCGGCGG
GCATCGACGCCTGGGAGGCGCTGGGGAACCCCGGCTGGTCCTGGCAGTCG
TTGGCCCCGTACTTTCACCGTAGCTTTCACATCTGCCCCCAGTCTACTCC
TGGCAATGGTCCTGGTGCTGCGGCATCAGCCGCAGCTGGGCCCATTGAAG
TCACTTATCCCGCACTGGCTGAACCGAGGAATCACACCATCATCGACGCC
TGGAACAAGAGCTTTGCAGATAAGGGCTACGCCTTCAGTGATACTCTGAT
CCCAACTCCCACCATCGGCACCCGCCCCTACACAGCTACCATCACCACCA
CAGGCGTTCGGAGCGACAGCACTCAGTATGCAGCATCGCGCCCCAACCTG
CGCATCCTCGCCGACACCACGGTCGAACGCATCCTCTTCGACACGACAAC
CACCACCATCACCGCCACGGGGGTCCTCCTCCACAACGATCCCTCTCCCA
TCACCGCCACCAAAGAGGTGATCCTCGCCGCGGGTGCCTTCAACACGCCT
AAACTCCTCGAACTCTCCGGCATCGGCTCCGCATCCCGGCTCTCCACGCA
TGACATTCCCTGCATCATTGACAACCCTTCCGTTGGCGAAAATCTTCAGA
ACCACCTCATGGCCCTCCTTCCCGTTCCCATCCAAGCCTCTTCGGATTCT
GCCTCCCCAACCCCAGGCATTCAAGCCATCTCTTTCGTCCGCTCGGGTGC
TGAGGCCGACCTTCTCGCCCGTCACCCTCCCCTCCAGACCCCCCTCAACA
CCCTCCTCGCCAACCCCTCCGAACCCACAGCCTGCTTCTTCCTCAGCACG
CTGCCCAACTCTATGGCCATTCTCGGCTTGATCCCCTCCTACCCCCTCTC
CCGCGGCTCCGTCCACCTCTCTTCCTCCCAGCCCACTGACAAGCCCATTA
TCGACCCAGACTATCTGTCGCACCCCCTGGATCTCCCACTCATGGCAGAG
CACTTCAAGACCCTTCACTCCCTCCCAACCAGCCTTCCATTGAAGGAGCT
CCTTGGCTCCGCGCCGGGCCCCAGCCCTGAGACTCAGGATCCGGGTGTGG
TGGAGGAGACGTTGAGGGCATCGGTCGTGGCGGCGCATCATTTTTGCGGG
ACGGCCATCATGGCCCCGCGGGAGAAGGGGGGTGTGGTTGATAGCAATCT
GCGGGTTTATGGGACCGGTAACTTGAGAATCGTCGATGCCAGTGTATTCC
CTATCGTGACGGCAGCGAATCCCATGTCGACGGTGTATGCTGTTGCGGAG
CGAGCGGCGGAGCTTATCCGGGGAAGGGCAGGACATTCCGTGTGAATGAC
CCACCTGAGCGCCGACTACATTGTCATCGGCGGCGGCACTGCCGGTCTGG
TGGTGGCCAACCGCCTGTCGGAAGACCCCGACGTCCAAGTGCTTGTACTG
GAGGCGGGACCGGACCGCAGCTCGGACGAGCGTGTTCAGGACCCGGCGGC
GTGGCCCACCCTGAGCGGATCCGAGATGGACTGGCAGTTCAAGACTGTAC
CGCAGCCCGCCTTGAATAACCGCGACCAAGACTACGCTGCGGGCCGGCTG
CTGGGCGGTACCTCCGCCATCAACGGGCTGGCGTTTGTGCCCCCCGCCCC
GGCGGGCATCGACGCCTGGGAGGCGCTGGGGAACCCCGGCTGGTCCTGGC
AGTCGTTGGCCCCGTACTTTCACCGTAGCTTTCACATCTGCCCCCAGTCT
ACTCCTGGCAATGGTCCTGGTGCTGCGGCATCAGCCGCAGCTGGGCCCAT
TGAAGTCACTTATCCCGCACTGGCTGAACCGAGGAATCACACCATCATCG
ACGCCTGGAACAAGAGCTTTGCAGATAAGGGCTACGCCTTCAGTGATACT
CTGATCCCAACTCCCACCATCGGCACCCGCCCCTACACAGCTACCATCAC
CACCACAGGCGTTCGGAGCGACAGCACTCAGTATGCAGCATCGCGCCCCA
ACCTGCGCATCCTCGCCGACACCACGGTCGAACGCATCCTCTTCGACACG
ACAACCACCACCATCACCGCCACGGGGGTCCTCCTCCACAACGATCCCTC
TCCCATCACCGCCACCAAAGAGGTGATCCTCGCCGCGGGTGCCTTCAACA
CGCCTAAACTCCTCGAACTCTCCGGCATCGGCTCCGCATCCCGGCTCTCC
ACGCATGACATTCCCTGCATCATTGACAACCCTTCCGTTGGCGAAAATCT
TCAGAACCACCTCATGGCCCTCCTTCCCGTTCCCATCCAAGCCTCTTCGG
ATTCTGCCTCCCCAACCCCAGGCATTCAAGCCATCTCTTTCGTCCGCTCG
GGTGCTGAGGCCGACCTTCTCGCCCGTCACCCTCCCCTCCAGACCCCCCT
CAACACCCTCCTCGCCAACCCCTCCGAACCCACAGCCTGCTTCTTCCTCA
GCACGCTGCCCAACTCTATGGCCATTCTCGGCTTGATCCCCTCCTACCCC
CTCTCCCGCGGCTCCGTCCACCTCTCTTCCTCCCAGCCCACTGACAAGCC
CATTATCGACCCAGACTATCTGTCGCACCCCCTGGATCTCCCACTCATGG
CAGAGCACTTCAAGACCCTTCACTCCCTCCCAACCAGCCTTCCATTGAAG
GAGCTCCTTGGCTCCGCGCCGGGCCCCAGCCCTGAGACTCAGGATCCGGG
TGTGGTGGAGGAGACGTTGAGGGCATCGGTCGTGGCGGCGCATCATTTTT
GCGGGACGGCCATCATGGCCCCGCGGGAGAAGGGGGGTGTGGTTGATAGC
AATCTGCGGGTTTATGGGACCGGTAACTTGAGAATCGTCGATGCCAGTGT
ATTCCCTATCGTGACGGCAGCGAATCCCATGTCGACGGTGTATGCTGTTG
CGGAGCGAGCGGCGGAGCTTATCCGGGGAAGGGCAGGACATTCCGTGTGA
ATGACCCACCTGAGCGCCGACTACATTGTCATCGGCGGCGGCACTGCCGG
TCTGGTGGTGGCCAACCGCCTGTCGGAAGACCCCGACGTCCAAGTGCTTG
TACTGGAGGCGGGACCGGACCGCAGCTCGGACGAGCGTGTTCAGGACCCG
GCGGCGTGGCCCACCCTGAGCGGATCCGAGATGGACTGGCAGTTCAAGAC
TGTACCGCAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0050660flavin adenine dinucleotide binding
GO:0016614oxidoreductase activity, acting on CH-OH group of donors
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_78890ATCC64974_78890Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_78890-T1ATCC64974_78890-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_78890-T1.cdsATCC64974_78890-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_78890-T1.exon2ATCC64974_78890-T1.exon2Aspergillus niger N402exon
ATCC64974_78890-T1.exon1ATCC64974_78890-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
NoteCAZy:AA3_3
NoteCAZy:AA3
NoteCAZy:AA3_2
DBxrefInterPro:IPR000172
DBxrefInterPro:IPR012132
DBxrefInterPro:IPR007867
DBxrefInterPro:IPR036188
DBxrefPFAM:PF00732
DBxrefPFAM:PF05199
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:1670815..1672486 -
Powered by Drupal