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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000013.1:1859329..1860454- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_79490-T1 ID=ATCC64974_79490-T1|Name=ATCC64974_79490-T1|organism=Aspergillus niger N402|type=mRNA|length=1126bp|location=Sequence derived from alignment at OGUI01000013.1:1859329..1860454- (Aspergillus niger N402)
ATGGATCGCTCCAACAAGCCTGCCGCCATCGGCGTCGGTGCCTCTCTTCC
CCAACCCACCATCTCCCTCCGCGACAACACCGTTGAAGCTACCCTCCCCA
CCGGCGAGTCCGTCACTGTCCACCTCTACGGAGCCACCGTCACCTCCTGG
AAGCTCGCCAATGGCAAGGAACAGCTCTTCGTGAGCGAGAAGGCTCATCT
AGATGGCTCCAAACCTATCCGGGGTGGTATTCCCGTCGTATTCCCGGTAT
GTCCCCTTCAAGCCAATGACTACTGAACCGCCAGCTTGCTTTCTACACCT
CGCTCCAAGCATCCCACTGAAAGGCAAACAAACTAACTCCTATCTCCATC
AAATCAGGTCTTCGGTCCTCCTCCCTCCAATCACGCCACCTCTGCACTCC
CTCAACACGGCTTTGCCCGGAACTCGAACTGGGAATTCCTCGGCAAATCC
TCGTCCGAAGCGTTCGGCCGCGACCGGAAAGAAGGCGAAGACGCTGTGAA
GTTGGACTTCGGATTGTCGCATCCTATGCTGAGCGAGGAATTCCAGAAGG
CCTGGCCGTATCAGTTTGGATTGGTGTATAGCGTAACTTTGACAAAGGGG
AGCCTGGAGACTTCTCTGCAGGTGCAGAACCAGGGCGAGCAGAATTTCGA
TTTCCAGGTGTTGATGCACACGTATTTGAGTGTTGAGGTATGTCACAACC
CAACTTCCGGGCTGTGGTTAGGCTAATGAGGCATGGCAGGACATCTCCAA
CATCCGCGTTAAGAACCTCCAGCAAAAGGAATACTTGGACAAGACACAGG
GCGGTGCAGCTATCACGGAGACTTCGGAGGCAGTGGAGATCAACAAGGAA
ACGGACCGTGTGTACAAGGCATTGGATCCGAAGGTGCCGATTATCGTGTC
CACGGTGTCGGATGATCAGCCTCTGTTCTCGATCACAAGGGAGGCCTTGA
CGGATGTGGTGGTGTGGAACCCCTGGATCGAGAAGGCCAAGGGTATGGCG
GACTTTGGTCCCGATGAGGCATACAAGAACATGCTTTGTGTCGAGGCCGG
TTCTGTTGCTGGATGGCAGACCCTGGAGGCAGGCGAATCTTGGGAAGGTG
GACAGACTATCCGGCCCCGGCTGTAG back to topCoding sequence (CDS) from alignment at OGUI01000013.1:1859329..1860454- >ATCC64974_79490-T1 ID=ATCC64974_79490-T1|Name=ATCC64974_79490-T1|organism=Aspergillus niger N402|type=CDS|length=2889bp|location=Sequence derived from alignment at OGUI01000013.1:1859329..1860454- (Aspergillus niger N402)
GACATCTCCAACATCCGCGTTAAGAACCTCCAGCAAAAGGAATACTTGGA
CAAGACACAGGGCGGTGCAGCTATCACGGAGACTTCGGAGGCAGTGGAGA
TCAACAAGGAAACGGACCGTGTGTACAAGGCATTGGATCCGAAGGTGCCG
ATTATCGTGTCCACGGTGTCGGATGATCAGCCTCTGTTCTCGATCACAAG
GGAGGCCTTGACGGATGTGGTGGTGTGGAACCCCTGGATCGAGAAGGCCA
AGGGTATGGCGGACTTTGGTCCCGATGAGGCATACAAGAACATGCTTTGT
GTCGAGGCCGGTTCTGTTGCTGGATGGCAGACCCTGGAGGCAGGCGAATC
TTGGGAAGGTGGACAGACTATCCGGCCCCGGCTGTAGGTCTTCGGTCCTC
CTCCCTCCAATCACGCCACCTCTGCACTCCCTCAACACGGCTTTGCCCGG
AACTCGAACTGGGAATTCCTCGGCAAATCCTCGTCCGAAGCGTTCGGCCG
CGACCGGAAAGAAGGCGAAGACGCTGTGAAGTTGGACTTCGGATTGTCGC
ATCCTATGCTGAGCGAGGAATTCCAGAAGGCCTGGCCGTATCAGTTTGGA
TTGGTGTATAGCGTAACTTTGACAAAGGGGAGCCTGGAGACTTCTCTGCA
GGTGCAGAACCAGGGCGAGCAGAATTTCGATTTCCAGGTGTTGATGCACA
CGTATTTGAGTGTTGAGATGGATCGCTCCAACAAGCCTGCCGCCATCGGC
GTCGGTGCCTCTCTTCCCCAACCCACCATCTCCCTCCGCGACAACACCGT
TGAAGCTACCCTCCCCACCGGCGAGTCCGTCACTGTCCACCTCTACGGAG
CCACCGTCACCTCCTGGAAGCTCGCCAATGGCAAGGAACAGCTCTTCGTG
AGCGAGAAGGCTCATCTAGATGGCTCCAAACCTATCCGGGGTGGTATTCC
CGTCGTATTCCCGGACATCTCCAACATCCGCGTTAAGAACCTCCAGCAAA
AGGAATACTTGGACAAGACACAGGGCGGTGCAGCTATCACGGAGACTTCG
GAGGCAGTGGAGATCAACAAGGAAACGGACCGTGTGTACAAGGCATTGGA
TCCGAAGGTGCCGATTATCGTGTCCACGGTGTCGGATGATCAGCCTCTGT
TCTCGATCACAAGGGAGGCCTTGACGGATGTGGTGGTGTGGAACCCCTGG
ATCGAGAAGGCCAAGGGTATGGCGGACTTTGGTCCCGATGAGGCATACAA
GAACATGCTTTGTGTCGAGGCCGGTTCTGTTGCTGGATGGCAGACCCTGG
AGGCAGGCGAATCTTGGGAAGGTGGACAGACTATCCGGCCCCGGCTGTAG
GTCTTCGGTCCTCCTCCCTCCAATCACGCCACCTCTGCACTCCCTCAACA
CGGCTTTGCCCGGAACTCGAACTGGGAATTCCTCGGCAAATCCTCGTCCG
AAGCGTTCGGCCGCGACCGGAAAGAAGGCGAAGACGCTGTGAAGTTGGAC
TTCGGATTGTCGCATCCTATGCTGAGCGAGGAATTCCAGAAGGCCTGGCC
GTATCAGTTTGGATTGGTGTATAGCGTAACTTTGACAAAGGGGAGCCTGG
AGACTTCTCTGCAGGTGCAGAACCAGGGCGAGCAGAATTTCGATTTCCAG
GTGTTGATGCACACGTATTTGAGTGTTGAGATGGATCGCTCCAACAAGCC
TGCCGCCATCGGCGTCGGTGCCTCTCTTCCCCAACCCACCATCTCCCTCC
GCGACAACACCGTTGAAGCTACCCTCCCCACCGGCGAGTCCGTCACTGTC
CACCTCTACGGAGCCACCGTCACCTCCTGGAAGCTCGCCAATGGCAAGGA
ACAGCTCTTCGTGAGCGAGAAGGCTCATCTAGATGGCTCCAAACCTATCC
GGGGTGGTATTCCCGTCGTATTCCCGGACATCTCCAACATCCGCGTTAAG
AACCTCCAGCAAAAGGAATACTTGGACAAGACACAGGGCGGTGCAGCTAT
CACGGAGACTTCGGAGGCAGTGGAGATCAACAAGGAAACGGACCGTGTGT
ACAAGGCATTGGATCCGAAGGTGCCGATTATCGTGTCCACGGTGTCGGAT
GATCAGCCTCTGTTCTCGATCACAAGGGAGGCCTTGACGGATGTGGTGGT
GTGGAACCCCTGGATCGAGAAGGCCAAGGGTATGGCGGACTTTGGTCCCG
ATGAGGCATACAAGAACATGCTTTGTGTCGAGGCCGGTTCTGTTGCTGGA
TGGCAGACCCTGGAGGCAGGCGAATCTTGGGAAGGTGGACAGACTATCCG
GCCCCGGCTGTAGGTCTTCGGTCCTCCTCCCTCCAATCACGCCACCTCTG
CACTCCCTCAACACGGCTTTGCCCGGAACTCGAACTGGGAATTCCTCGGC
AAATCCTCGTCCGAAGCGTTCGGCCGCGACCGGAAAGAAGGCGAAGACGC
TGTGAAGTTGGACTTCGGATTGTCGCATCCTATGCTGAGCGAGGAATTCC
AGAAGGCCTGGCCGTATCAGTTTGGATTGGTGTATAGCGTAACTTTGACA
AAGGGGAGCCTGGAGACTTCTCTGCAGGTGCAGAACCAGGGCGAGCAGAA
TTTCGATTTCCAGGTGTTGATGCACACGTATTTGAGTGTTGAGATGGATC
GCTCCAACAAGCCTGCCGCCATCGGCGTCGGTGCCTCTCTTCCCCAACCC
ACCATCTCCCTCCGCGACAACACCGTTGAAGCTACCCTCCCCACCGGCGA
GTCCGTCACTGTCCACCTCTACGGAGCCACCGTCACCTCCTGGAAGCTCG
CCAATGGCAAGGAACAGCTCTTCGTGAGCGAGAAGGCTCATCTAGATGGC
TCCAAACCTATCCGGGGTGGTATTCCCGTCGTATTCCCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0016853 | isomerase activity |
| GO:0030246 | carbohydrate binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_79490-T1 | ATCC64974_79490-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011013 |
| DBxref | InterPro:IPR008183 |
| DBxref | InterPro:IPR025532 |
| DBxref | InterPro:IPR014718 |
| DBxref | PFAM:PF01263 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000013.1 | supercontig | OGUI01000013.1:1859329..1860454 - |
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