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ATCC64974_79520-T1, ATCC64974_79520-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_79520-T1
Unique NameATCC64974_79520-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:1867892..1870061-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_79520-T1 ID=ATCC64974_79520-T1|Name=ATCC64974_79520-T1|organism=Aspergillus niger N402|type=mRNA|length=2170bp|location=Sequence derived from alignment at OGUI01000013.1:1867892..1870061- (Aspergillus niger N402)
ATGGGTACCTTCAAGAAGGAAGCCTCTCGTAAAGAGCGGCAGGGGAAGAC
TGGAGATGGCATGGGGAACGTCCGGGTAAAGGGTGAAAACTTTTACAGGT
TAGTACACCCGTTGCGACAGATGGTCCTGGATATGTGTGCTGACTTGTTC
AAGAGATGCGAAGAAGTTGAGGACCTTGAATATGCTCAAGGATGGTAAAC
CCCAACGTAACGCTGAAGGAAAGATCACCAAGGCTGCTTCGTACCAGTCT
CGAGACGCCCCCGTCGCTAGGATTGAACCCAACCGTAAATGGTTTGGAAA
CACCAGAGTGATCTCGCAAGAGGCTCTGTCCTCTTTCCGTGAGGCGGTCG
CTGAGCGTGCTTCTGATCCGTATTCAGTCTTGCTCAAGACCAACAAACTT
CCCATGAGCCTGATCAGAGATGACAAGGGTGTAAATGGATTGAAGCAGCA
CCAGGCCAAGATGGCCATCGAGACGAATCCCTTCAGTGACACCTTCGGGC
CCAAGGCTCAGAGGAAACGTGTCAAGTTGGGTGTTTCGTCGCTTGCGGAT
CTGGCTGGCGAGTCCGCCAAGATGCACGACGCCTATGTTGAGAAGTCGGA
CCATGCTACTCATGAAGATGGTACTATGGTGGTGAACGGTGATGACGTCG
CAGTAGAGGAGGACTCTAGTGTCGCGCCCATCGCAAAGGAGGCTGTCTTC
CTTAAGGGACAGAGTAAGCGTATTTGGAACGAACTTTACAAGGTCATTGA
TTCCTCCGATGTTGTCATCCATCTCCTTGATGCTCGTGATCCGGAAGGTA
CACGGTGCAGGAGTATCGAAAAATACATCCGGGAGGAGGCTCCTCACAAG
CACTTGATTTTCGTCTTGAACAAGTGTGATCTTGTGCCTACAGGCGTGGC
GGTAAGTCTCTATTCGCTTTCTTTTCTCCTTGCAACCACCCCCTATTCCT
TTGATATACAACACGGCTTTTCGCCGATGCCATCGCTAAGTCAAGGCTAC
TCCTGCGACTTCATGTCGTGTTATTCACTATGGGAGACTGTCTGTTACAG
CTTTGGCAGATTGACGCTGGTCCGCGCCGACCTTCTTTCTGAAGCTAGGC
TGATTGGTTTTCGTTTTGAAAGCCAATCGTTAAGGACCGAGCTGTGTTCT
GTTTTTGAGTTGAGTCCTGCTTCCGCTCTTGAAGTGGCATCATAGCAGGT
CTCTTAGTAACATTTCACACATCCTGTCATCATACTTCTGTTTCTTTCTT
TTTTTAATTTTTTTTTCTCTTATTCTTTGACTATGCTATACTTTGATAGC
AACGCTGGTGTTCAGCTGCTAACGTGACACCAGGCTGCTTGGGTTCGCCA
CCTTTCTAAGGATTATCCTACCTTGGCTTTCCATGCTTCTATCAACAATT
CCTTCGGGAAAGGCTCGTTGATCCAGCTACTGAGACAATTTTCTTCTTTG
CACTCGGACCGGAAGCAGATTTCCGTGGGATTCATTGGATACCCCAACAC
TGGAAAGTCTTCCGTCATCAACACCTTGCGCAAGAAGAAGGTGTGCACTG
TGGCTCCTATCCCGGGTGAAACCAAGGTGTGGCAGTACGTTACCTTGATG
AAGAGGATCTACCTCATTGATTGCCCTGGTGTGGTTCCTCCGAACCCGAA
CGACTCTCCAGAGGATATTCTTCTCCGTGGTGTCGTCCGTGTGGAGAACG
TAGAGAACCCTGAGCAGTACATCCCAGCTATTCTCAAGCGTGTTCAGCCT
AAGCATTTGGAGCGTACCTACGGTATCAAGAGCACTGAAGACCCCGTCGA
GTTCCTCAGTCTCCTTGCCCGCAAGGGCGGTCGACTCCTCCGTGGTGGAG
AGCCTGATCTTGACGGTGTTGCCAAGATGGTCATTAACGACTTCCTTCGT
GGAAAGATCCCTTGGTTCACTGCCCCCCCTCACAACAGTGGCGAGGAGGG
CGAGAAGATTGAAGGTCGTGAAGGTCGCCTCGGCGAAATGAGCCGCAAGC
GGAAGCTTGATGAGACCGCTCCTGAGGCTGCTGATACCACAGAAGCGGCT
GAGAAGCAAGAGTCTGGCTCGGGAGATGAGTTCGAGGGCTTTGACGAGGA
AGATGATGATGACGACTCGATCGCCAATCTTGAGGTCAGCGACGAGGAGA
GCGGAGCGGAGGAAGATTAA
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Coding sequence (CDS) from alignment at OGUI01000013.1:1867892..1870061-

>ATCC64974_79520-T1 ID=ATCC64974_79520-T1|Name=ATCC64974_79520-T1|organism=Aspergillus niger N402|type=CDS|length=5049bp|location=Sequence derived from alignment at OGUI01000013.1:1867892..1870061- (Aspergillus niger N402)
GCTGCTTGGGTTCGCCACCTTTCTAAGGATTATCCTACCTTGGCTTTCCA
TGCTTCTATCAACAATTCCTTCGGGAAAGGCTCGTTGATCCAGCTACTGA
GACAATTTTCTTCTTTGCACTCGGACCGGAAGCAGATTTCCGTGGGATTC
ATTGGATACCCCAACACTGGAAAGTCTTCCGTCATCAACACCTTGCGCAA
GAAGAAGGTGTGCACTGTGGCTCCTATCCCGGGTGAAACCAAGGTGTGGC
AGTACGTTACCTTGATGAAGAGGATCTACCTCATTGATTGCCCTGGTGTG
GTTCCTCCGAACCCGAACGACTCTCCAGAGGATATTCTTCTCCGTGGTGT
CGTCCGTGTGGAGAACGTAGAGAACCCTGAGCAGTACATCCCAGCTATTC
TCAAGCGTGTTCAGCCTAAGCATTTGGAGCGTACCTACGGTATCAAGAGC
ACTGAAGACCCCGTCGAGTTCCTCAGTCTCCTTGCCCGCAAGGGCGGTCG
ACTCCTCCGTGGTGGAGAGCCTGATCTTGACGGTGTTGCCAAGATGGTCA
TTAACGACTTCCTTCGTGGAAAGATCCCTTGGTTCACTGCCCCCCCTCAC
AACAGTGGCGAGGAGGGCGAGAAGATTGAAGGTCGTGAAGGTCGCCTCGG
CGAAATGAGCCGCAAGCGGAAGCTTGATGAGACCGCTCCTGAGGCTGCTG
ATACCACAGAAGCGGCTGAGAAGCAAGAGTCTGGCTCGGGAGATGAGTTC
GAGGGCTTTGACGAGGAAGATGATGATGACGACTCGATCGCCAATCTTGA
GGTCAGCGACGAGGAGAGCGGAGCGGAGGAAGATTAAAGATGCGAAGAAG
TTGAGGACCTTGAATATGCTCAAGGATGGTAAACCCCAACGTAACGCTGA
AGGAAAGATCACCAAGGCTGCTTCGTACCAGTCTCGAGACGCCCCCGTCG
CTAGGATTGAACCCAACCGTAAATGGTTTGGAAACACCAGAGTGATCTCG
CAAGAGGCTCTGTCCTCTTTCCGTGAGGCGGTCGCTGAGCGTGCTTCTGA
TCCGTATTCAGTCTTGCTCAAGACCAACAAACTTCCCATGAGCCTGATCA
GAGATGACAAGGGTGTAAATGGATTGAAGCAGCACCAGGCCAAGATGGCC
ATCGAGACGAATCCCTTCAGTGACACCTTCGGGCCCAAGGCTCAGAGGAA
ACGTGTCAAGTTGGGTGTTTCGTCGCTTGCGGATCTGGCTGGCGAGTCCG
CCAAGATGCACGACGCCTATGTTGAGAAGTCGGACCATGCTACTCATGAA
GATGGTACTATGGTGGTGAACGGTGATGACGTCGCAGTAGAGGAGGACTC
TAGTGTCGCGCCCATCGCAAAGGAGGCTGTCTTCCTTAAGGGACAGAGTA
AGCGTATTTGGAACGAACTTTACAAGGTCATTGATTCCTCCGATGTTGTC
ATCCATCTCCTTGATGCTCGTGATCCGGAAGGTACACGGTGCAGGAGTAT
CGAAAAATACATCCGGGAGGAGGCTCCTCACAAGCACTTGATTTTCGTCT
TGAACAAGTGTGATCTTGTGCCTACAGGCGTGGCGATGGGTACCTTCAAG
AAGGAAGCCTCTCGTAAAGAGCGGCAGGGGAAGACTGGAGATGGCATGGG
GAACGTCCGGGTAAAGGGTGAAAACTTTTACAGGCTGCTTGGGTTCGCCA
CCTTTCTAAGGATTATCCTACCTTGGCTTTCCATGCTTCTATCAACAATT
CCTTCGGGAAAGGCTCGTTGATCCAGCTACTGAGACAATTTTCTTCTTTG
CACTCGGACCGGAAGCAGATTTCCGTGGGATTCATTGGATACCCCAACAC
TGGAAAGTCTTCCGTCATCAACACCTTGCGCAAGAAGAAGGTGTGCACTG
TGGCTCCTATCCCGGGTGAAACCAAGGTGTGGCAGTACGTTACCTTGATG
AAGAGGATCTACCTCATTGATTGCCCTGGTGTGGTTCCTCCGAACCCGAA
CGACTCTCCAGAGGATATTCTTCTCCGTGGTGTCGTCCGTGTGGAGAACG
TAGAGAACCCTGAGCAGTACATCCCAGCTATTCTCAAGCGTGTTCAGCCT
AAGCATTTGGAGCGTACCTACGGTATCAAGAGCACTGAAGACCCCGTCGA
GTTCCTCAGTCTCCTTGCCCGCAAGGGCGGTCGACTCCTCCGTGGTGGAG
AGCCTGATCTTGACGGTGTTGCCAAGATGGTCATTAACGACTTCCTTCGT
GGAAAGATCCCTTGGTTCACTGCCCCCCCTCACAACAGTGGCGAGGAGGG
CGAGAAGATTGAAGGTCGTGAAGGTCGCCTCGGCGAAATGAGCCGCAAGC
GGAAGCTTGATGAGACCGCTCCTGAGGCTGCTGATACCACAGAAGCGGCT
GAGAAGCAAGAGTCTGGCTCGGGAGATGAGTTCGAGGGCTTTGACGAGGA
AGATGATGATGACGACTCGATCGCCAATCTTGAGGTCAGCGACGAGGAGA
GCGGAGCGGAGGAAGATTAAAGATGCGAAGAAGTTGAGGACCTTGAATAT
GCTCAAGGATGGTAAACCCCAACGTAACGCTGAAGGAAAGATCACCAAGG
CTGCTTCGTACCAGTCTCGAGACGCCCCCGTCGCTAGGATTGAACCCAAC
CGTAAATGGTTTGGAAACACCAGAGTGATCTCGCAAGAGGCTCTGTCCTC
TTTCCGTGAGGCGGTCGCTGAGCGTGCTTCTGATCCGTATTCAGTCTTGC
TCAAGACCAACAAACTTCCCATGAGCCTGATCAGAGATGACAAGGGTGTA
AATGGATTGAAGCAGCACCAGGCCAAGATGGCCATCGAGACGAATCCCTT
CAGTGACACCTTCGGGCCCAAGGCTCAGAGGAAACGTGTCAAGTTGGGTG
TTTCGTCGCTTGCGGATCTGGCTGGCGAGTCCGCCAAGATGCACGACGCC
TATGTTGAGAAGTCGGACCATGCTACTCATGAAGATGGTACTATGGTGGT
GAACGGTGATGACGTCGCAGTAGAGGAGGACTCTAGTGTCGCGCCCATCG
CAAAGGAGGCTGTCTTCCTTAAGGGACAGAGTAAGCGTATTTGGAACGAA
CTTTACAAGGTCATTGATTCCTCCGATGTTGTCATCCATCTCCTTGATGC
TCGTGATCCGGAAGGTACACGGTGCAGGAGTATCGAAAAATACATCCGGG
AGGAGGCTCCTCACAAGCACTTGATTTTCGTCTTGAACAAGTGTGATCTT
GTGCCTACAGGCGTGGCGATGGGTACCTTCAAGAAGGAAGCCTCTCGTAA
AGAGCGGCAGGGGAAGACTGGAGATGGCATGGGGAACGTCCGGGTAAAGG
GTGAAAACTTTTACAGGCTGCTTGGGTTCGCCACCTTTCTAAGGATTATC
CTACCTTGGCTTTCCATGCTTCTATCAACAATTCCTTCGGGAAAGGCTCG
TTGATCCAGCTACTGAGACAATTTTCTTCTTTGCACTCGGACCGGAAGCA
GATTTCCGTGGGATTCATTGGATACCCCAACACTGGAAAGTCTTCCGTCA
TCAACACCTTGCGCAAGAAGAAGGTGTGCACTGTGGCTCCTATCCCGGGT
GAAACCAAGGTGTGGCAGTACGTTACCTTGATGAAGAGGATCTACCTCAT
TGATTGCCCTGGTGTGGTTCCTCCGAACCCGAACGACTCTCCAGAGGATA
TTCTTCTCCGTGGTGTCGTCCGTGTGGAGAACGTAGAGAACCCTGAGCAG
TACATCCCAGCTATTCTCAAGCGTGTTCAGCCTAAGCATTTGGAGCGTAC
CTACGGTATCAAGAGCACTGAAGACCCCGTCGAGTTCCTCAGTCTCCTTG
CCCGCAAGGGCGGTCGACTCCTCCGTGGTGGAGAGCCTGATCTTGACGGT
GTTGCCAAGATGGTCATTAACGACTTCCTTCGTGGAAAGATCCCTTGGTT
CACTGCCCCCCCTCACAACAGTGGCGAGGAGGGCGAGAAGATTGAAGGTC
GTGAAGGTCGCCTCGGCGAAATGAGCCGCAAGCGGAAGCTTGATGAGACC
GCTCCTGAGGCTGCTGATACCACAGAAGCGGCTGAGAAGCAAGAGTCTGG
CTCGGGAGATGAGTTCGAGGGCTTTGACGAGGAAGATGATGATGACGACT
CGATCGCCAATCTTGAGGTCAGCGACGAGGAGAGCGGAGCGGAGGAAGAT
TAAAGATGCGAAGAAGTTGAGGACCTTGAATATGCTCAAGGATGGTAAAC
CCCAACGTAACGCTGAAGGAAAGATCACCAAGGCTGCTTCGTACCAGTCT
CGAGACGCCCCCGTCGCTAGGATTGAACCCAACCGTAAATGGTTTGGAAA
CACCAGAGTGATCTCGCAAGAGGCTCTGTCCTCTTTCCGTGAGGCGGTCG
CTGAGCGTGCTTCTGATCCGTATTCAGTCTTGCTCAAGACCAACAAACTT
CCCATGAGCCTGATCAGAGATGACAAGGGTGTAAATGGATTGAAGCAGCA
CCAGGCCAAGATGGCCATCGAGACGAATCCCTTCAGTGACACCTTCGGGC
CCAAGGCTCAGAGGAAACGTGTCAAGTTGGGTGTTTCGTCGCTTGCGGAT
CTGGCTGGCGAGTCCGCCAAGATGCACGACGCCTATGTTGAGAAGTCGGA
CCATGCTACTCATGAAGATGGTACTATGGTGGTGAACGGTGATGACGTCG
CAGTAGAGGAGGACTCTAGTGTCGCGCCCATCGCAAAGGAGGCTGTCTTC
CTTAAGGGACAGAGTAAGCGTATTTGGAACGAACTTTACAAGGTCATTGA
TTCCTCCGATGTTGTCATCCATCTCCTTGATGCTCGTGATCCGGAAGGTA
CACGGTGCAGGAGTATCGAAAAATACATCCGGGAGGAGGCTCCTCACAAG
CACTTGATTTTCGTCTTGAACAAGTGTGATCTTGTGCCTACAGGCGTGGC
GATGGGTACCTTCAAGAAGGAAGCCTCTCGTAAAGAGCGGCAGGGGAAGA
CTGGAGATGGCATGGGGAACGTCCGGGTAAAGGGTGAAAACTTTTACAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NOG2ATCC64974_79520Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_79520-T1ATCC64974_79520-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_79520-T1.cdsATCC64974_79520-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_79520-T1.exon3ATCC64974_79520-T1.exon3Aspergillus niger N402exon
ATCC64974_79520-T1.exon2ATCC64974_79520-T1.exon2Aspergillus niger N402exon
ATCC64974_79520-T1.exon1ATCC64974_79520-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR030378
DBxrefInterPro:IPR023179
DBxrefInterPro:IPR012971
DBxrefInterPro:IPR006073
DBxrefPFAM:PF08153
ProductGTPase required for pre-60S ribosomal subunit nuclear export and maturation
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:1867892..1870061 -
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