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ATCC64974_79710-T1, ATCC64974_79710-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_79710-T1
Unique NameATCC64974_79710-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:1926735..1928709-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_79710-T1 ID=ATCC64974_79710-T1|Name=ATCC64974_79710-T1|organism=Aspergillus niger N402|type=mRNA|length=1975bp|location=Sequence derived from alignment at OGUI01000013.1:1926735..1928709- (Aspergillus niger N402)
ATGGACGGAACATACACCATGGCACCTACTTCGGTGCAAGGTCAACCATC
ATTTGCATACTACGCTGATTCGCAGCAAAGACAACATTTCACCAGCCACC
CCTCAGATATGCAGTCATACTATGGCCAAGTGCAGGCCTTCCAGCAACAA
CCACAGCACTGCATGCCGGAGCAGCAGACACTCTACACTGCCCCTCTCAT
GAACATGCACCAGATGGCTACCACCAATGCCTTCCGTGGTGCCATGAACA
TGACTCCCATTGCCTCTCCTCAGCCGTCACACCTCAAGCCCACAATTGTT
GTGCAGCAGGGCTCTCCCGCCCTGATGCCTCTGGACACGAGGTTCGTCGG
TAACGACTACTACGCATTCCCCTCCACCCCACCACTCTCCACAGCTGGAA
GCTCTATCAGCAGCCCGCCTTCTACCAGCGGCACCCTTCACACCCCGATC
AATGACAGCTTCTTCGCTTTCGAGAAGGTGGAAGGTGTCAAGGAGGGATG
CGAGGGAGACGTCCATGCAGAGATTCTGGCCAATGCTGACTGGGCCCGGT
CTGACTCGCCGCCTCTTACACCTGGTAAGTCATTATCTAACCCGATGTCC
CTTTTTTACATGGTTGCAAGATAGGCTGCAGGGAGTGGGTGCAGCCAACG
GAAAAGGCACGGGGCCGGGCATCTAGGGTTGTACAGGGAGACTAACTCGA
CTTGTTCTAGTGTTCATCCATCCGCCTTCCCTCACCGCCAGCCAAACATC
CGAGCTTCTGTCAGCGCACAGCTCTTGCCCATCCCTTTCCCCATCGCCAT
CTCCCGTGGTCCCCACATTCGTTGCCCAGCCTCAAGGTCTGCCGACCGAG
CAGTCCAGCTCCGACTTCTGTGACCCCCGTCAGCTGACGGTTGAGTCCTC
CATCAATGCCACCCCTGCTGAGCTGCCGCCTCTGCCCACGCTCTCCTGCG
ATGACGAGGAGCCTCGGGTGGTTCTGGGCAGCGAGGCCGTGACCCTTCCT
GTCCATGAGACCCTCTCTCCCGCCTTCACCTGCTCCTCTTCGGAGGACCC
TCTCAGCAGCCTGCCGACCTTTGACAGCTTCTCGGACCTGGACTCGGAAG
ACGAATTCGTCAACCGCCTGGTCGACTTCCCCCCTAGTGGCAATGCCTAC
TACTTGGGTGAGAAGAGGCAGCGCGTGGGAACGACATACCCCCTTGAGGA
AGAGGAATTCTTCAGTGAGCAGAGCTTCGACGAGTCTGACGAGCAAGATC
TCTCTCAGTCCAGTCTCCCTTACCTGGGAAGCCACGACTTCACTGGCGTC
CAGACGAACATCAATGAAGCTTCGGAAGAGATGGGCAACAAGAAGAGGAA
CAACCGCAAGTCGCTGAAGCGGGCTAGTACCTCGGACAGCGAAACGGATT
CGATTAGCAAGAAGTCGCAGCCTTCGATCAACAGCCGTGCCACCAGCACT
GAGACAAACGCCTCGACACCCCAGACTGTCCAGGCCCGCCACAACTCCGA
TGCGCATTCGTCGTGCGCTTCTGAGGCTCCTGCTGCCCCCGTCTCGGTCA
ACCGACGCGGTCGTAAGCAGTCCCTGACGGATGACCCCTCCAAGACCTTC
GTGTGCACCCTCTGCTCCCGTCGCTTCCGTCGCCAAGAGCACCTCAAGCG
TCACTACCGCTCTCTCCACACTCAGGACAAGCCTTTCGAGTGCAATGAGT
GCGGTAAGAAGTTCTCGCGGAGCGATAACCTTGCGCAGCACGCTCGCACT
CATGCGGGTGGCTCTGTCGTGATGGGCGTCATCGACACCGGCAATGCGAC
CCCGCCAACCCCCTATGAAGAACGAGACCCCAGTACGCTGGGAAATGTTC
TCTACGAGGCCGCCAACGCCGCCGCTACCAAGTCCACAACCAGTGAGTCG
GATGAGAGTTCCTCTGACTCGCCGGTTGCCGACCGACGGGCGCCCAAGAA
GCGCAAGCGCGACAGCGATGCCTAG
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Coding sequence (CDS) from alignment at OGUI01000013.1:1926735..1928709-

>ATCC64974_79710-T1 ID=ATCC64974_79710-T1|Name=ATCC64974_79710-T1|organism=Aspergillus niger N402|type=CDS|length=3678bp|location=Sequence derived from alignment at OGUI01000013.1:1926735..1928709- (Aspergillus niger N402)
TGTTCATCCATCCGCCTTCCCTCACCGCCAGCCAAACATCCGAGCTTCTG
TCAGCGCACAGCTCTTGCCCATCCCTTTCCCCATCGCCATCTCCCGTGGT
CCCCACATTCGTTGCCCAGCCTCAAGGTCTGCCGACCGAGCAGTCCAGCT
CCGACTTCTGTGACCCCCGTCAGCTGACGGTTGAGTCCTCCATCAATGCC
ACCCCTGCTGAGCTGCCGCCTCTGCCCACGCTCTCCTGCGATGACGAGGA
GCCTCGGGTGGTTCTGGGCAGCGAGGCCGTGACCCTTCCTGTCCATGAGA
CCCTCTCTCCCGCCTTCACCTGCTCCTCTTCGGAGGACCCTCTCAGCAGC
CTGCCGACCTTTGACAGCTTCTCGGACCTGGACTCGGAAGACGAATTCGT
CAACCGCCTGGTCGACTTCCCCCCTAGTGGCAATGCCTACTACTTGGGTG
AGAAGAGGCAGCGCGTGGGAACGACATACCCCCTTGAGGAAGAGGAATTC
TTCAGTGAGCAGAGCTTCGACGAGTCTGACGAGCAAGATCTCTCTCAGTC
CAGTCTCCCTTACCTGGGAAGCCACGACTTCACTGGCGTCCAGACGAACA
TCAATGAAGCTTCGGAAGAGATGGGCAACAAGAAGAGGAACAACCGCAAG
TCGCTGAAGCGGGCTAGTACCTCGGACAGCGAAACGGATTCGATTAGCAA
GAAGTCGCAGCCTTCGATCAACAGCCGTGCCACCAGCACTGAGACAAACG
CCTCGACACCCCAGACTGTCCAGGCCCGCCACAACTCCGATGCGCATTCG
TCGTGCGCTTCTGAGGCTCCTGCTGCCCCCGTCTCGGTCAACCGACGCGG
TCGTAAGCAGTCCCTGACGGATGACCCCTCCAAGACCTTCGTGTGCACCC
TCTGCTCCCGTCGCTTCCGTCGCCAAGAGCACCTCAAGCGTCACTACCGC
TCTCTCCACACTCAGGACAAGCCTTTCGAGTGCAATGAGTGCGGTAAGAA
GTTCTCGCGGAGCGATAACCTTGCGCAGCACGCTCGCACTCATGCGGGTG
GCTCTGTCGTGATGGGCGTCATCGACACCGGCAATGCGACCCCGCCAACC
CCCTATGAAGAACGAGACCCCAGTACGCTGGGAAATGTTCTCTACGAGGC
CGCCAACGCCGCCGCTACCAAGTCCACAACCAGTGAGTCGGATGAGAGTT
CCTCTGACTCGCCGGTTGCCGACCGACGGGCGCCCAAGAAGCGCAAGCGC
GACAGCGATGCCTAGATGGACGGAACATACACCATGGCACCTACTTCGGT
GCAAGGTCAACCATCATTTGCATACTACGCTGATTCGCAGCAAAGACAAC
ATTTCACCAGCCACCCCTCAGATATGCAGTCATACTATGGCCAAGTGCAG
GCCTTCCAGCAACAACCACAGCACTGCATGCCGGAGCAGCAGACACTCTA
CACTGCCCCTCTCATGAACATGCACCAGATGGCTACCACCAATGCCTTCC
GTGGTGCCATGAACATGACTCCCATTGCCTCTCCTCAGCCGTCACACCTC
AAGCCCACAATTGTTGTGCAGCAGGGCTCTCCCGCCCTGATGCCTCTGGA
CACGAGGTTCGTCGGTAACGACTACTACGCATTCCCCTCCACCCCACCAC
TCTCCACAGCTGGAAGCTCTATCAGCAGCCCGCCTTCTACCAGCGGCACC
CTTCACACCCCGATCAATGACAGCTTCTTCGCTTTCGAGAAGGTGGAAGG
TGTCAAGGAGGGATGCGAGGGAGACGTCCATGCAGAGATTCTGGCCAATG
CTGACTGGGCCCGGTCTGACTCGCCGCCTCTTACACCTGTGTTCATCCAT
CCGCCTTCCCTCACCGCCAGCCAAACATCCGAGCTTCTGTCAGCGCACAG
CTCTTGCCCATCCCTTTCCCCATCGCCATCTCCCGTGGTCCCCACATTCG
TTGCCCAGCCTCAAGGTCTGCCGACCGAGCAGTCCAGCTCCGACTTCTGT
GACCCCCGTCAGCTGACGGTTGAGTCCTCCATCAATGCCACCCCTGCTGA
GCTGCCGCCTCTGCCCACGCTCTCCTGCGATGACGAGGAGCCTCGGGTGG
TTCTGGGCAGCGAGGCCGTGACCCTTCCTGTCCATGAGACCCTCTCTCCC
GCCTTCACCTGCTCCTCTTCGGAGGACCCTCTCAGCAGCCTGCCGACCTT
TGACAGCTTCTCGGACCTGGACTCGGAAGACGAATTCGTCAACCGCCTGG
TCGACTTCCCCCCTAGTGGCAATGCCTACTACTTGGGTGAGAAGAGGCAG
CGCGTGGGAACGACATACCCCCTTGAGGAAGAGGAATTCTTCAGTGAGCA
GAGCTTCGACGAGTCTGACGAGCAAGATCTCTCTCAGTCCAGTCTCCCTT
ACCTGGGAAGCCACGACTTCACTGGCGTCCAGACGAACATCAATGAAGCT
TCGGAAGAGATGGGCAACAAGAAGAGGAACAACCGCAAGTCGCTGAAGCG
GGCTAGTACCTCGGACAGCGAAACGGATTCGATTAGCAAGAAGTCGCAGC
CTTCGATCAACAGCCGTGCCACCAGCACTGAGACAAACGCCTCGACACCC
CAGACTGTCCAGGCCCGCCACAACTCCGATGCGCATTCGTCGTGCGCTTC
TGAGGCTCCTGCTGCCCCCGTCTCGGTCAACCGACGCGGTCGTAAGCAGT
CCCTGACGGATGACCCCTCCAAGACCTTCGTGTGCACCCTCTGCTCCCGT
CGCTTCCGTCGCCAAGAGCACCTCAAGCGTCACTACCGCTCTCTCCACAC
TCAGGACAAGCCTTTCGAGTGCAATGAGTGCGGTAAGAAGTTCTCGCGGA
GCGATAACCTTGCGCAGCACGCTCGCACTCATGCGGGTGGCTCTGTCGTG
ATGGGCGTCATCGACACCGGCAATGCGACCCCGCCAACCCCCTATGAAGA
ACGAGACCCCAGTACGCTGGGAAATGTTCTCTACGAGGCCGCCAACGCCG
CCGCTACCAAGTCCACAACCAGTGAGTCGGATGAGAGTTCCTCTGACTCG
CCGGTTGCCGACCGACGGGCGCCCAAGAAGCGCAAGCGCGACAGCGATGC
CTAGATGGACGGAACATACACCATGGCACCTACTTCGGTGCAAGGTCAAC
CATCATTTGCATACTACGCTGATTCGCAGCAAAGACAACATTTCACCAGC
CACCCCTCAGATATGCAGTCATACTATGGCCAAGTGCAGGCCTTCCAGCA
ACAACCACAGCACTGCATGCCGGAGCAGCAGACACTCTACACTGCCCCTC
TCATGAACATGCACCAGATGGCTACCACCAATGCCTTCCGTGGTGCCATG
AACATGACTCCCATTGCCTCTCCTCAGCCGTCACACCTCAAGCCCACAAT
TGTTGTGCAGCAGGGCTCTCCCGCCCTGATGCCTCTGGACACGAGGTTCG
TCGGTAACGACTACTACGCATTCCCCTCCACCCCACCACTCTCCACAGCT
GGAAGCTCTATCAGCAGCCCGCCTTCTACCAGCGGCACCCTTCACACCCC
GATCAATGACAGCTTCTTCGCTTTCGAGAAGGTGGAAGGTGTCAAGGAGG
GATGCGAGGGAGACGTCCATGCAGAGATTCTGGCCAATGCTGACTGGGCC
CGGTCTGACTCGCCGCCTCTTACACCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_79710ATCC64974_79710Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_79710-T1ATCC64974_79710-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_79710-T1.cdsATCC64974_79710-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_79710-T1.exon2ATCC64974_79710-T1.exon2Aspergillus niger N402exon
ATCC64974_79710-T1.exon1ATCC64974_79710-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
DBxrefPFAM:PF12874
DBxrefPFAM:PF00096
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:1926735..1928709 -
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