You are here

Home

ATCC64974_80-T1, ATCC64974_80-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_80-T1
Unique NameATCC64974_80-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:74092..74915-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_80-T1 ID=ATCC64974_80-T1|Name=ATCC64974_80-T1|organism=Aspergillus niger N402|type=mRNA|length=824bp|location=Sequence derived from alignment at OGUI01000001.1:74092..74915- (Aspergillus niger N402)
ATGGCGACTGATCACAAATCAATTCTTGTCCCCCCGAAGCGGGCCAATAC
GGACTACCCGGTAGGGTCGATGTTCTTTATTCGACTTGGACTTACGGATC
TTGCGGCTAACTTGAGCTTTTGTAGCTAATTGACTCCGACCCGTATGGAC
TAGCTTGACGTTACCATATTGCAATTGACTCACTTTTCAAACCAGGCACC
TGAGACGAGTTTTCGGATATGCACGACCCTCTGACTACGCAGTGGGCGGC
GGAATGGCCGCTGCGTCTCCTCTTGCGTTCTGGATTATGGAAAGAGTGAG
CCCATCCCATGTGGGCAGGGGAGGGTTCGCTCCTGTGATGCGCCTAGCAA
CAGCCATTGGCCTTATTGGAGGTCTTCACGTGGTCTATCAGAGATCCTGC
AGTCAGTGCAACCATGGTTTTGGTCTACATCTTTTTTAACACTAACGCTC
TTGTACAGACCGCTTCTATGGCTTCACAGAGAATTCGAGGGAAGCTGATA
TGGATATGAAGGAGATGGTGGACAAAGTCAAGAAAGGGGAGTCCCTATAT
GGCACATCCAAAGTCTCCTCATACCTGCAAGGAGTTGCTGCTCGAAACTC
TAGATACTCTGAGCTATTTATCCATGTTCTTCCATGGTTCAACCTAGTCA
ACCATGACCAGGTAAGTGCAATGGAGGAGCGACCGCCTTTCATACGTAAT
CATCAGCGCTGAATACCAAATTGGTTACTAACTGCAATACAAGCATGGCG
TCGACACGGCCAAATACTATCAGCAAGCCGAGCGGGAGCTGGAAGCCGAG
CGGTTGAAGCAAGCGAGCTCCTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000001.1:74092..74915-

>ATCC64974_80-T1 ID=ATCC64974_80-T1|Name=ATCC64974_80-T1|organism=Aspergillus niger N402|type=CDS|length=2835bp|location=Sequence derived from alignment at OGUI01000001.1:74092..74915- (Aspergillus niger N402)
CATGGCGTCGACACGGCCAAATACTATCAGCAAGCCGAGCGGGAGCTGGA
AGCCGAGCGGTTGAAGCAAGCGAGCTCCTGAACCGCTTCTATGGCTTCAC
AGAGAATTCGAGGGAAGCTGATATGGATATGAAGGAGATGGTGGACAAAG
TCAAGAAAGGGGAGTCCCTATATGGCACATCCAAAGTCTCCTCATACCTG
CAAGGAGTTGCTGCTCGAAACTCTAGATACTCTGAGCTATTTATCCATGT
TCTTCCATGGTTCAACCTAGTCAACCATGACCAGGCACCTGAGACGAGTT
TTCGGATATGCACGACCCTCTGACTACGCAGTGGGCGGCGGAATGGCCGC
TGCGTCTCCTCTTGCGTTCTGGATTATGGAAAGAGTGAGCCCATCCCATG
TGGGCAGGGGAGGGTTCGCTCCTGTGATGCGCCTAGCAACAGCCATTGGC
CTTATTGGAGGTCTTCACGTGGTCTATCAGAGATCCTGCACTAATTGACT
CCGACCCATGGCGACTGATCACAAATCAATTCTTGTCCCCCCGAAGCGGG
CCAATACGGACTACCCGCATGGCGTCGACACGGCCAAATACTATCAGCAA
GCCGAGCGGGAGCTGGAAGCCGAGCGGTTGAAGCAAGCGAGCTCCTGAAC
CGCTTCTATGGCTTCACAGAGAATTCGAGGGAAGCTGATATGGATATGAA
GGAGATGGTGGACAAAGTCAAGAAAGGGGAGTCCCTATATGGCACATCCA
AAGTCTCCTCATACCTGCAAGGAGTTGCTGCTCGAAACTCTAGATACTCT
GAGCTATTTATCCATGTTCTTCCATGGTTCAACCTAGTCAACCATGACCA
GGCACCTGAGACGAGTTTTCGGATATGCACGACCCTCTGACTACGCAGTG
GGCGGCGGAATGGCCGCTGCGTCTCCTCTTGCGTTCTGGATTATGGAAAG
AGTGAGCCCATCCCATGTGGGCAGGGGAGGGTTCGCTCCTGTGATGCGCC
TAGCAACAGCCATTGGCCTTATTGGAGGTCTTCACGTGGTCTATCAGAGA
TCCTGCACTAATTGACTCCGACCCATGGCGACTGATCACAAATCAATTCT
TGTCCCCCCGAAGCGGGCCAATACGGACTACCCGCATGGCGTCGACACGG
CCAAATACTATCAGCAAGCCGAGCGGGAGCTGGAAGCCGAGCGGTTGAAG
CAAGCGAGCTCCTGAACCGCTTCTATGGCTTCACAGAGAATTCGAGGGAA
GCTGATATGGATATGAAGGAGATGGTGGACAAAGTCAAGAAAGGGGAGTC
CCTATATGGCACATCCAAAGTCTCCTCATACCTGCAAGGAGTTGCTGCTC
GAAACTCTAGATACTCTGAGCTATTTATCCATGTTCTTCCATGGTTCAAC
CTAGTCAACCATGACCAGGCACCTGAGACGAGTTTTCGGATATGCACGAC
CCTCTGACTACGCAGTGGGCGGCGGAATGGCCGCTGCGTCTCCTCTTGCG
TTCTGGATTATGGAAAGAGTGAGCCCATCCCATGTGGGCAGGGGAGGGTT
CGCTCCTGTGATGCGCCTAGCAACAGCCATTGGCCTTATTGGAGGTCTTC
ACGTGGTCTATCAGAGATCCTGCACTAATTGACTCCGACCCATGGCGACT
GATCACAAATCAATTCTTGTCCCCCCGAAGCGGGCCAATACGGACTACCC
GCATGGCGTCGACACGGCCAAATACTATCAGCAAGCCGAGCGGGAGCTGG
AAGCCGAGCGGTTGAAGCAAGCGAGCTCCTGAACCGCTTCTATGGCTTCA
CAGAGAATTCGAGGGAAGCTGATATGGATATGAAGGAGATGGTGGACAAA
GTCAAGAAAGGGGAGTCCCTATATGGCACATCCAAAGTCTCCTCATACCT
GCAAGGAGTTGCTGCTCGAAACTCTAGATACTCTGAGCTATTTATCCATG
TTCTTCCATGGTTCAACCTAGTCAACCATGACCAGGCACCTGAGACGAGT
TTTCGGATATGCACGACCCTCTGACTACGCAGTGGGCGGCGGAATGGCCG
CTGCGTCTCCTCTTGCGTTCTGGATTATGGAAAGAGTGAGCCCATCCCAT
GTGGGCAGGGGAGGGTTCGCTCCTGTGATGCGCCTAGCAACAGCCATTGG
CCTTATTGGAGGTCTTCACGTGGTCTATCAGAGATCCTGCACTAATTGAC
TCCGACCCATGGCGACTGATCACAAATCAATTCTTGTCCCCCCGAAGCGG
GCCAATACGGACTACCCGCATGGCGTCGACACGGCCAAATACTATCAGCA
AGCCGAGCGGGAGCTGGAAGCCGAGCGGTTGAAGCAAGCGAGCTCCTGAA
CCGCTTCTATGGCTTCACAGAGAATTCGAGGGAAGCTGATATGGATATGA
AGGAGATGGTGGACAAAGTCAAGAAAGGGGAGTCCCTATATGGCACATCC
AAAGTCTCCTCATACCTGCAAGGAGTTGCTGCTCGAAACTCTAGATACTC
TGAGCTATTTATCCATGTTCTTCCATGGTTCAACCTAGTCAACCATGACC
AGGCACCTGAGACGAGTTTTCGGATATGCACGACCCTCTGACTACGCAGT
GGGCGGCGGAATGGCCGCTGCGTCTCCTCTTGCGTTCTGGATTATGGAAA
GAGTGAGCCCATCCCATGTGGGCAGGGGAGGGTTCGCTCCTGTGATGCGC
CTAGCAACAGCCATTGGCCTTATTGGAGGTCTTCACGTGGTCTATCAGAG
ATCCTGCACTAATTGACTCCGACCCATGGCGACTGATCACAAATCAATTC
TTGTCCCCCCGAAGCGGGCCAATACGGACTACCCG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_80ATCC64974_80Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_80-T1ATCC64974_80-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_80-T1.cdsATCC64974_80-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_80-T1.exon5ATCC64974_80-T1.exon5Aspergillus niger N402exon
ATCC64974_80-T1.exon4ATCC64974_80-T1.exon4Aspergillus niger N402exon
ATCC64974_80-T1.exon3ATCC64974_80-T1.exon3Aspergillus niger N402exon
ATCC64974_80-T1.exon2ATCC64974_80-T1.exon2Aspergillus niger N402exon
ATCC64974_80-T1.exon1ATCC64974_80-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR024549
DBxrefInterPro:IPR019721
DBxrefPFAM:PF12853
DBxrefPFAM:PF10785
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:74092..74915 -
Powered by Drupal