You are here

Home

ATCC64974_80100-T1, ATCC64974_80100-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_80100-T1
Unique NameATCC64974_80100-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:2058340..2059223+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_80100-T1 ID=ATCC64974_80100-T1|Name=ATCC64974_80100-T1|organism=Aspergillus niger N402|type=mRNA|length=884bp|location=Sequence derived from alignment at OGUI01000013.1:2058340..2059223+ (Aspergillus niger N402)
ATGCACCTCCTAACCACCCTCCTCCTATCCACCACCACCACCATCACCAC
CCTTCTAGCAACCGCCTACTCCATCCCCCCCAACCTATCCGCCCTCTACA
ACAAACACAAGGTCTGCCCTAATACCCCCCCTTCCCTACTCCCTCCCCTA
ACCCCCCAATCCACTAAATCAAAACAACAAAACAGTCCAAACCGTGCCTC
CACCCCCTCGCCACCGGCTTCCACGACGGCCAAAACCCCACCGACAGCAC
ATTCACCTACTGCAGCGACCTAAGCAACAAATCCATCTTCCTGCACAGCC
CCACGCTCGGCGGCCGCTACGACAACATGGACATAGACTGCGACGGGGCG
AACTCTCACGGCGGGAACTGCGGCTACGACGAGTCCATCCAAGACCAAAC
GAGCTTCAAGGATCTTGTTGTATCTCAGTACGGGATCCCCGATCTGGACG
CCAATATACATCCGTATGTGGTCTTCGGGAATACGGATTATGATCCCCAG
AGGGATGGCATGTGGCCGTTGAGTGTTATGGTGGTGGTTTGTGGGAATCA
GCTTGTGAGTGGTCCCCTCCGGAGGAGTGGTTTATTGTGTAAGGGGTAGG
GGGGTTGCTGATGATAAGGGATCATCTAGTTTTATGGAATCTGGGGTGAT
ACGGCTGGGGGGAGTTGGACGGGAGAGGCGTCGATTGCGTTGGCTAAGTT
GTGTTTTCCTGATGATGGGATGAGTGGGGATAATGGGCATGTTGGGGATG
ATGTCCTGTATATTGGGTTTGTTGGGAGGGAGGCGGTTCCTGGGGGGAGG
GCGAATTGGAAGGCTGGGAGTACGTGGGAGTTTGAGGAAAGTATTCGCGG
ATTGGGGGAGAGGTTGGTTGCGACGCTTACTTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000013.1:2058340..2059223+

>ATCC64974_80100-T1 ID=ATCC64974_80100-T1|Name=ATCC64974_80100-T1|organism=Aspergillus niger N402|type=CDS|length=2205bp|location=Sequence derived from alignment at OGUI01000013.1:2058340..2059223+ (Aspergillus niger N402)
ATGCACCTCCTAACCACCCTCCTCCTATCCACCACCACCACCATCACCAC
CCTTCTAGCAACCGCCTACTCCATCCCCCCCAACCTATCCGCCCTCTACA
ACAAACACAAGTCCAAACCGTGCCTCCACCCCCTCGCCACCGGCTTCCAC
GACGGCCAAAACCCCACCGACAGCACATTCACCTACTGCAGCGACCTAAG
CAACAAATCCATCTTCCTGCACAGCCCCACGCTCGGCGGCCGCTACGACA
ACATGGACATAGACTGCGACGGGGCGAACTCTCACGGCGGGAACTGCGGC
TACGACGAGTCCATCCAAGACCAAACGAGCTTCAAGGATCTTGTTGTATC
TCAGTACGGGATCCCCGATCTGGACGCCAATATACATCCGTATGTGGTCT
TCGGGAATACGGATTATGATCCCCAGAGGGATGGCATGTGGCCGTTGAGT
GTTATGGTGGTGGTTTGTGGGAATCAGCTTTTTTATGGAATCTGGGGTGA
TACGGCTGGGGGGAGTTGGACGGGAGAGGCGTCGATTGCGTTGGCTAAGT
TGTGTTTTCCTGATGATGGGATGAGTGGGGATAATGGGCATGTTGGGGAT
GATGTCCTGTATATTGGGTTTGTTGGGAGGGAGGCGGTTCCTGGGGGGAG
GGCGAATTGGAAGGCTGGGAGTACGTGGGAGTTTGAGGAAAGTATTCGCG
GATTGGGGGAGAGGTTGGTTGCGACGCTTACTTAGATGCACCTCCTAACC
ACCCTCCTCCTATCCACCACCACCACCATCACCACCCTTCTAGCAACCGC
CTACTCCATCCCCCCCAACCTATCCGCCCTCTACAACAAACACAAGTCCA
AACCGTGCCTCCACCCCCTCGCCACCGGCTTCCACGACGGCCAAAACCCC
ACCGACAGCACATTCACCTACTGCAGCGACCTAAGCAACAAATCCATCTT
CCTGCACAGCCCCACGCTCGGCGGCCGCTACGACAACATGGACATAGACT
GCGACGGGGCGAACTCTCACGGCGGGAACTGCGGCTACGACGAGTCCATC
CAAGACCAAACGAGCTTCAAGGATCTTGTTGTATCTCAGTACGGGATCCC
CGATCTGGACGCCAATATACATCCGTATGTGGTCTTCGGGAATACGGATT
ATGATCCCCAGAGGGATGGCATGTGGCCGTTGAGTGTTATGGTGGTGGTT
TGTGGGAATCAGCTTTTTTATGGAATCTGGGGTGATACGGCTGGGGGGAG
TTGGACGGGAGAGGCGTCGATTGCGTTGGCTAAGTTGTGTTTTCCTGATG
ATGGGATGAGTGGGGATAATGGGCATGTTGGGGATGATGTCCTGTATATT
GGGTTTGTTGGGAGGGAGGCGGTTCCTGGGGGGAGGGCGAATTGGAAGGC
TGGGAGTACGTGGGAGTTTGAGGAAAGTATTCGCGGATTGGGGGAGAGGT
TGGTTGCGACGCTTACTTAGATGCACCTCCTAACCACCCTCCTCCTATCC
ACCACCACCACCATCACCACCCTTCTAGCAACCGCCTACTCCATCCCCCC
CAACCTATCCGCCCTCTACAACAAACACAAGTCCAAACCGTGCCTCCACC
CCCTCGCCACCGGCTTCCACGACGGCCAAAACCCCACCGACAGCACATTC
ACCTACTGCAGCGACCTAAGCAACAAATCCATCTTCCTGCACAGCCCCAC
GCTCGGCGGCCGCTACGACAACATGGACATAGACTGCGACGGGGCGAACT
CTCACGGCGGGAACTGCGGCTACGACGAGTCCATCCAAGACCAAACGAGC
TTCAAGGATCTTGTTGTATCTCAGTACGGGATCCCCGATCTGGACGCCAA
TATACATCCGTATGTGGTCTTCGGGAATACGGATTATGATCCCCAGAGGG
ATGGCATGTGGCCGTTGAGTGTTATGGTGGTGGTTTGTGGGAATCAGCTT
TTTTATGGAATCTGGGGTGATACGGCTGGGGGGAGTTGGACGGGAGAGGC
GTCGATTGCGTTGGCTAAGTTGTGTTTTCCTGATGATGGGATGAGTGGGG
ATAATGGGCATGTTGGGGATGATGTCCTGTATATTGGGTTTGTTGGGAGG
GAGGCGGTTCCTGGGGGGAGGGCGAATTGGAAGGCTGGGAGTACGTGGGA
GTTTGAGGAAAGTATTCGCGGATTGGGGGAGAGGTTGGTTGCGACGCTTA
CTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016977chitosanase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_80100ATCC64974_80100Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_80100-T1.exon1ATCC64974_80100-T1.exon1Aspergillus niger N402exon
ATCC64974_80100-T1.exon2ATCC64974_80100-T1.exon2Aspergillus niger N402exon
ATCC64974_80100-T1.exon3ATCC64974_80100-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_80100-T1.cdsATCC64974_80100-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_80100-T1ATCC64974_80100-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-24)
NoteCAZy:GH75
DBxrefInterPro:IPR009939
DBxrefPFAM:PF07335
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:2058340..2059223 +
Powered by Drupal