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ATCC64974_80160-T1, ATCC64974_80160-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_80160-T1
Unique NameATCC64974_80160-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:2085126..2086816+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_80160-T1 ID=ATCC64974_80160-T1|Name=ATCC64974_80160-T1|organism=Aspergillus niger N402|type=mRNA|length=1691bp|location=Sequence derived from alignment at OGUI01000013.1:2085126..2086816+ (Aspergillus niger N402)
ATGTCCACCTACACCATCGTCAGCGGCGACTCATTATGGAAAATCTCCCA
AGACCACGGCGTCACCCTCGACGCCCTCCGAGCAGCCAACCCGCAGATCA
CCAACCCAGATCTTATCTATCCGGGGCAAGAGCTGAATATTCCGGGGCCT
GATCAGCCTCCTCCGGAAAGTCGCAGCATCCCGGGTGATGTCCCAGGCCA
AGCTCCTCCTCCTTCTTCTGCTCCTCCTGTTCACCTTGCCGTCTGTCCCC
CAGGGCCGCCGGTTGTTCCAGGCGCTGCTGGAGCACCGCCCGCCATTCCC
CCGCGTCCTCCGATGGCCCGTCCGCCGCCTCCGTGGATCAATGCCGGGAG
ACCGGGGTATAAGACTGTTGGGTACTTTACTAACTGGGTATGTTATAGCT
TTAACTATTTGTATAAATCATTTGACTAATAAACGTGACAGGGAGTCTAC
GGCCGCAATTACCAACCTCAAGATATTCCTGCGGAGTATATCACTCACAT
TCTCTGTACGTTCTATCCCAATTCTATCATAGCGCTAGTCTAACATCAAT
AGATTCCTTCGCCAACATCCGCCCCACCGGCGAAGTGTACGTTTCACTCT
TCCCCTCCAAACCAATCCACCAAGCTAACATTTAGAAATGTAGCTTCCTC
ACCGACACCTACTCCGACCTCGAAAAGCACTACCCAACCGATAGCTGGTC
CGAGCCCGGTACCAACGCCTACGGATGCATCAAGCAACTCTACCTCCTAA
AACAACAACACCGCCACCTGAAAACCCTCCTTTCCATCGGCGGCTGGACC
TACAGTCCCAACTTCGCCGCGCCAGCATCCACGCCCCGCGGTCGCGAAAC
CTTCGCCCGCAGCGCCGTGCACCTCCTCGCGGACCTGGGCTTCGACGGCA
TCGACATCGACTGGGAGTATCCAGCCGATTCATCGCAAGCGATGGACTTT
GTGCACCTTTTGCGGGATGTGAGGCGCGTGCTGGACGAGTACTCCGCCAC
CCATCTTGGCGGAAAGAGACTGTTATTGACGATCGCGGCGCCGTGCGGGC
CGGACAATATCCAGAAACTGCGGATAGGCGATATGGATCCGTATCTTGAT
TTCTGGAATCTGATGTGTTATGATTTCAGCGGGAGCTGGGATAAGTGTTC
CGGCCATATGGCGAATGTGTTCCATTCGGGGAGGGGGGAGATTACGCCGT
TCTGTGCAGATGGGGCGGTGACGATGTATTTGAGGGGTGGGGTGAGGGAT
GCGAGGAAGCTTATATTTGGGTTGCCGTTGTATGGAAGGGCTTTTGAGGG
GACGGATGGGCCTGGGAGCGGGTTCCAGGGTGTTGGGGAGGGGAGTTGGG
AGAATGGGGTGTGGGATTATAAGGCTTTGCCGTTGCAGGGGAGTCAGGAG
GTGGTGGATGGGCGGTTGATGGCCAGTTGGTGTTTTGATCCGGCGAAGAG
GAAGATGGTTAGTTATGATACGCCGGAGGTGGCCGGGATGAAGACGGAGT
ATATTGCCGGGAGGAGGTTGGGAGGAGCTATGTGGTGGGAGTTGAGTGGG
GATCATCATGTTTCGCATGAGAGGAGCTTGGTTAAGGGGACTGCGGAGAG
GTTGGGTAGGTTGGGTGGGTTGGACGGTACGGAGAATACGTTGTATTATC
CGCTGAGTCGCTTTGAGAATTTGAGGAGGGGGTGTGTTTGA
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Coding sequence (CDS) from alignment at OGUI01000013.1:2085126..2086816+

>ATCC64974_80160-T1 ID=ATCC64974_80160-T1|Name=ATCC64974_80160-T1|organism=Aspergillus niger N402|type=CDS|length=6132bp|location=Sequence derived from alignment at OGUI01000013.1:2085126..2086816+ (Aspergillus niger N402)
ATGTCCACCTACACCATCGTCAGCGGCGACTCATTATGGAAAATCTCCCA
AGACCACGGCGTCACCCTCGACGCCCTCCGAGCAGCCAACCCGCAGATCA
CCAACCCAGATCTTATCTATCCGGGGCAAGAGCTGAATATTCCGGGGCCT
GATCAGCCTCCTCCGGAAAGTCGCAGCATCCCGGGTGATGTCCCAGGCCA
AGCTCCTCCTCCTTCTTCTGCTCCTCCTGTTCACCTTGCCGTCTGTCCCC
CAGGGCCGCCGGTTGTTCCAGGCGCTGCTGGAGCACCGCCCGCCATTCCC
CCGCGTCCTCCGATGGCCCGTCCGCCGCCTCCGTGGATCAATGCCGGGAG
ACCGGGGTATAAGACTGTTGGGTACTTTACTAACTGGGGAGTCTACGGCC
GCAATTACCAACCTCAAGATATTCCTGCGGAGTATATCACTCACATTCTC
TATTCCTTCGCCAACATCCGCCCCACCGGCGAAGTCTTCCTCACCGACAC
CTACTCCGACCTCGAAAAGCACTACCCAACCGATAGCTGGTCCGAGCCCG
GTACCAACGCCTACGGATGCATCAAGCAACTCTACCTCCTAAAACAACAA
CACCGCCACCTGAAAACCCTCCTTTCCATCGGCGGCTGGACCTACAGTCC
CAACTTCGCCGCGCCAGCATCCACGCCCCGCGGTCGCGAAACCTTCGCCC
GCAGCGCCGTGCACCTCCTCGCGGACCTGGGCTTCGACGGCATCGACATC
GACTGGGAGTATCCAGCCGATTCATCGCAAGCGATGGACTTTGTGCACCT
TTTGCGGGATGTGAGGCGCGTGCTGGACGAGTACTCCGCCACCCATCTTG
GCGGAAAGAGACTGTTATTGACGATCGCGGCGCCGTGCGGGCCGGACAAT
ATCCAGAAACTGCGGATAGGCGATATGGATCCGTATCTTGATTTCTGGAA
TCTGATGTGTTATGATTTCAGCGGGAGCTGGGATAAGTGTTCCGGCCATA
TGGCGAATGTGTTCCATTCGGGGAGGGGGGAGATTACGCCGTTCTGTGCA
GATGGGGCGGTGACGATGTATTTGAGGGGTGGGGTGAGGGATGCGAGGAA
GCTTATATTTGGGTTGCCGTTGTATGGAAGGGCTTTTGAGGGGACGGATG
GGCCTGGGAGCGGGTTCCAGGGTGTTGGGGAGGGGAGTTGGGAGAATGGG
GTGTGGGATTATAAGGCTTTGCCGTTGCAGGGGAGTCAGGAGGTGGTGGA
TGGGCGGTTGATGGCCAGTTGGTGTTTTGATCCGGCGAAGAGGAAGATGG
TTAGTTATGATACGCCGGAGGTGGCCGGGATGAAGACGGAGTATATTGCC
GGGAGGAGGTTGGGAGGAGCTATGTGGTGGGAGTTGAGTGGGGATCATCA
TGTTTCGCATGAGAGGAGCTTGGTTAAGGGGACTGCGGAGAGGTTGGGTA
GGTTGGGTGGGTTGGACGGTACGGAGAATACGTTGTATTATCCGCTGAGT
CGCTTTGAGAATTTGAGGAGGGGGTGTGTTTGAATGTCCACCTACACCAT
CGTCAGCGGCGACTCATTATGGAAAATCTCCCAAGACCACGGCGTCACCC
TCGACGCCCTCCGAGCAGCCAACCCGCAGATCACCAACCCAGATCTTATC
TATCCGGGGCAAGAGCTGAATATTCCGGGGCCTGATCAGCCTCCTCCGGA
AAGTCGCAGCATCCCGGGTGATGTCCCAGGCCAAGCTCCTCCTCCTTCTT
CTGCTCCTCCTGTTCACCTTGCCGTCTGTCCCCCAGGGCCGCCGGTTGTT
CCAGGCGCTGCTGGAGCACCGCCCGCCATTCCCCCGCGTCCTCCGATGGC
CCGTCCGCCGCCTCCGTGGATCAATGCCGGGAGACCGGGGTATAAGACTG
TTGGGTACTTTACTAACTGGGGAGTCTACGGCCGCAATTACCAACCTCAA
GATATTCCTGCGGAGTATATCACTCACATTCTCTATTCCTTCGCCAACAT
CCGCCCCACCGGCGAAGTCTTCCTCACCGACACCTACTCCGACCTCGAAA
AGCACTACCCAACCGATAGCTGGTCCGAGCCCGGTACCAACGCCTACGGA
TGCATCAAGCAACTCTACCTCCTAAAACAACAACACCGCCACCTGAAAAC
CCTCCTTTCCATCGGCGGCTGGACCTACAGTCCCAACTTCGCCGCGCCAG
CATCCACGCCCCGCGGTCGCGAAACCTTCGCCCGCAGCGCCGTGCACCTC
CTCGCGGACCTGGGCTTCGACGGCATCGACATCGACTGGGAGTATCCAGC
CGATTCATCGCAAGCGATGGACTTTGTGCACCTTTTGCGGGATGTGAGGC
GCGTGCTGGACGAGTACTCCGCCACCCATCTTGGCGGAAAGAGACTGTTA
TTGACGATCGCGGCGCCGTGCGGGCCGGACAATATCCAGAAACTGCGGAT
AGGCGATATGGATCCGTATCTTGATTTCTGGAATCTGATGTGTTATGATT
TCAGCGGGAGCTGGGATAAGTGTTCCGGCCATATGGCGAATGTGTTCCAT
TCGGGGAGGGGGGAGATTACGCCGTTCTGTGCAGATGGGGCGGTGACGAT
GTATTTGAGGGGTGGGGTGAGGGATGCGAGGAAGCTTATATTTGGGTTGC
CGTTGTATGGAAGGGCTTTTGAGGGGACGGATGGGCCTGGGAGCGGGTTC
CAGGGTGTTGGGGAGGGGAGTTGGGAGAATGGGGTGTGGGATTATAAGGC
TTTGCCGTTGCAGGGGAGTCAGGAGGTGGTGGATGGGCGGTTGATGGCCA
GTTGGTGTTTTGATCCGGCGAAGAGGAAGATGGTTAGTTATGATACGCCG
GAGGTGGCCGGGATGAAGACGGAGTATATTGCCGGGAGGAGGTTGGGAGG
AGCTATGTGGTGGGAGTTGAGTGGGGATCATCATGTTTCGCATGAGAGGA
GCTTGGTTAAGGGGACTGCGGAGAGGTTGGGTAGGTTGGGTGGGTTGGAC
GGTACGGAGAATACGTTGTATTATCCGCTGAGTCGCTTTGAGAATTTGAG
GAGGGGGTGTGTTTGAATGTCCACCTACACCATCGTCAGCGGCGACTCAT
TATGGAAAATCTCCCAAGACCACGGCGTCACCCTCGACGCCCTCCGAGCA
GCCAACCCGCAGATCACCAACCCAGATCTTATCTATCCGGGGCAAGAGCT
GAATATTCCGGGGCCTGATCAGCCTCCTCCGGAAAGTCGCAGCATCCCGG
GTGATGTCCCAGGCCAAGCTCCTCCTCCTTCTTCTGCTCCTCCTGTTCAC
CTTGCCGTCTGTCCCCCAGGGCCGCCGGTTGTTCCAGGCGCTGCTGGAGC
ACCGCCCGCCATTCCCCCGCGTCCTCCGATGGCCCGTCCGCCGCCTCCGT
GGATCAATGCCGGGAGACCGGGGTATAAGACTGTTGGGTACTTTACTAAC
TGGGGAGTCTACGGCCGCAATTACCAACCTCAAGATATTCCTGCGGAGTA
TATCACTCACATTCTCTATTCCTTCGCCAACATCCGCCCCACCGGCGAAG
TCTTCCTCACCGACACCTACTCCGACCTCGAAAAGCACTACCCAACCGAT
AGCTGGTCCGAGCCCGGTACCAACGCCTACGGATGCATCAAGCAACTCTA
CCTCCTAAAACAACAACACCGCCACCTGAAAACCCTCCTTTCCATCGGCG
GCTGGACCTACAGTCCCAACTTCGCCGCGCCAGCATCCACGCCCCGCGGT
CGCGAAACCTTCGCCCGCAGCGCCGTGCACCTCCTCGCGGACCTGGGCTT
CGACGGCATCGACATCGACTGGGAGTATCCAGCCGATTCATCGCAAGCGA
TGGACTTTGTGCACCTTTTGCGGGATGTGAGGCGCGTGCTGGACGAGTAC
TCCGCCACCCATCTTGGCGGAAAGAGACTGTTATTGACGATCGCGGCGCC
GTGCGGGCCGGACAATATCCAGAAACTGCGGATAGGCGATATGGATCCGT
ATCTTGATTTCTGGAATCTGATGTGTTATGATTTCAGCGGGAGCTGGGAT
AAGTGTTCCGGCCATATGGCGAATGTGTTCCATTCGGGGAGGGGGGAGAT
TACGCCGTTCTGTGCAGATGGGGCGGTGACGATGTATTTGAGGGGTGGGG
TGAGGGATGCGAGGAAGCTTATATTTGGGTTGCCGTTGTATGGAAGGGCT
TTTGAGGGGACGGATGGGCCTGGGAGCGGGTTCCAGGGTGTTGGGGAGGG
GAGTTGGGAGAATGGGGTGTGGGATTATAAGGCTTTGCCGTTGCAGGGGA
GTCAGGAGGTGGTGGATGGGCGGTTGATGGCCAGTTGGTGTTTTGATCCG
GCGAAGAGGAAGATGGTTAGTTATGATACGCCGGAGGTGGCCGGGATGAA
GACGGAGTATATTGCCGGGAGGAGGTTGGGAGGAGCTATGTGGTGGGAGT
TGAGTGGGGATCATCATGTTTCGCATGAGAGGAGCTTGGTTAAGGGGACT
GCGGAGAGGTTGGGTAGGTTGGGTGGGTTGGACGGTACGGAGAATACGTT
GTATTATCCGCTGAGTCGCTTTGAGAATTTGAGGAGGGGGTGTGTTTGAA
TGTCCACCTACACCATCGTCAGCGGCGACTCATTATGGAAAATCTCCCAA
GACCACGGCGTCACCCTCGACGCCCTCCGAGCAGCCAACCCGCAGATCAC
CAACCCAGATCTTATCTATCCGGGGCAAGAGCTGAATATTCCGGGGCCTG
ATCAGCCTCCTCCGGAAAGTCGCAGCATCCCGGGTGATGTCCCAGGCCAA
GCTCCTCCTCCTTCTTCTGCTCCTCCTGTTCACCTTGCCGTCTGTCCCCC
AGGGCCGCCGGTTGTTCCAGGCGCTGCTGGAGCACCGCCCGCCATTCCCC
CGCGTCCTCCGATGGCCCGTCCGCCGCCTCCGTGGATCAATGCCGGGAGA
CCGGGGTATAAGACTGTTGGGTACTTTACTAACTGGGGAGTCTACGGCCG
CAATTACCAACCTCAAGATATTCCTGCGGAGTATATCACTCACATTCTCT
ATTCCTTCGCCAACATCCGCCCCACCGGCGAAGTCTTCCTCACCGACACC
TACTCCGACCTCGAAAAGCACTACCCAACCGATAGCTGGTCCGAGCCCGG
TACCAACGCCTACGGATGCATCAAGCAACTCTACCTCCTAAAACAACAAC
ACCGCCACCTGAAAACCCTCCTTTCCATCGGCGGCTGGACCTACAGTCCC
AACTTCGCCGCGCCAGCATCCACGCCCCGCGGTCGCGAAACCTTCGCCCG
CAGCGCCGTGCACCTCCTCGCGGACCTGGGCTTCGACGGCATCGACATCG
ACTGGGAGTATCCAGCCGATTCATCGCAAGCGATGGACTTTGTGCACCTT
TTGCGGGATGTGAGGCGCGTGCTGGACGAGTACTCCGCCACCCATCTTGG
CGGAAAGAGACTGTTATTGACGATCGCGGCGCCGTGCGGGCCGGACAATA
TCCAGAAACTGCGGATAGGCGATATGGATCCGTATCTTGATTTCTGGAAT
CTGATGTGTTATGATTTCAGCGGGAGCTGGGATAAGTGTTCCGGCCATAT
GGCGAATGTGTTCCATTCGGGGAGGGGGGAGATTACGCCGTTCTGTGCAG
ATGGGGCGGTGACGATGTATTTGAGGGGTGGGGTGAGGGATGCGAGGAAG
CTTATATTTGGGTTGCCGTTGTATGGAAGGGCTTTTGAGGGGACGGATGG
GCCTGGGAGCGGGTTCCAGGGTGTTGGGGAGGGGAGTTGGGAGAATGGGG
TGTGGGATTATAAGGCTTTGCCGTTGCAGGGGAGTCAGGAGGTGGTGGAT
GGGCGGTTGATGGCCAGTTGGTGTTTTGATCCGGCGAAGAGGAAGATGGT
TAGTTATGATACGCCGGAGGTGGCCGGGATGAAGACGGAGTATATTGCCG
GGAGGAGGTTGGGAGGAGCTATGTGGTGGGAGTTGAGTGGGGATCATCAT
GTTTCGCATGAGAGGAGCTTGGTTAAGGGGACTGCGGAGAGGTTGGGTAG
GTTGGGTGGGTTGGACGGTACGGAGAATACGTTGTATTATCCGCTGAGTC
GCTTTGAGAATTTGAGGAGGGGGTGTGTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0008061chitin binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_80160ATCC64974_80160Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_80160-T1.exon1ATCC64974_80160-T1.exon1Aspergillus niger N402exon
ATCC64974_80160-T1.exon2ATCC64974_80160-T1.exon2Aspergillus niger N402exon
ATCC64974_80160-T1.exon3ATCC64974_80160-T1.exon3Aspergillus niger N402exon
ATCC64974_80160-T1.exon4ATCC64974_80160-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_80160-T1.cdsATCC64974_80160-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_80160-T1ATCC64974_80160-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteCAZy:GH18
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR001579
DBxrefInterPro:IPR001223
DBxrefInterPro:IPR029070
DBxrefInterPro:IPR036779
DBxrefInterPro:IPR011583
DBxrefInterPro:IPR018392
DBxrefPFAM:PF01476
DBxrefPFAM:PF00704
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:2085126..2086816 +
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