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ATCC64974_80300-T1, ATCC64974_80300-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_80300-T1
Unique NameATCC64974_80300-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:2123412..2124241+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_80300-T1 ID=ATCC64974_80300-T1|Name=ATCC64974_80300-T1|organism=Aspergillus niger N402|type=mRNA|length=830bp|location=Sequence derived from alignment at OGUI01000013.1:2123412..2124241+ (Aspergillus niger N402)
ATGTCGTACTATGATATAGATGCCATCTTGACAGATTCCCAAGTATGTGT
TGTCAATCCTGGAAAATGAAAATGCATGCATGGCTGATTACCACCCAACC
AGAAACTACCCTGCACATTTGAATTGGACGTACCTGGTCTTGGTATTTTG
GAGGGCAATCCGGGGGAAAATGTACATCTTCCTTCTGAATGGTTGGATGG
GAGGTTTGCTAAGTGTAGTCTAACTAGATCAAAGCTGGAACGCGCATTGA
TTTGCCGTTATGGCTGGGTGAGATGCTTTCTATCGGGTCAGTTATTTTAC
TTCCACTACTGATAATATCTTGGTGAGGTATCGTCTAACTATCGCAGTGC
CCGACTGGGAACCTCTCGGCTAGTCACGCTGGATCTCCCCTCAGCACTCT
CAGAACGAGTCATGAATGCCTTGAAAGCTGATCCTCGGACGGTGGATCTG
CGGTCATTGGCGCCGCATTTTTATAGTCTGAGCGAGAGGATTCTGGAGCT
GTTTGAGGAAGAGGAATTGGTGGAGGTTTTGAGTAATGTATGGTGCTTTT
GTGAACTGGGGATGTGATTAATGTGGCTAATTGTGATGATGATAGACGTT
CAAGAAGCGCTCAGCAGTCATTGCGGACCATGCGCATAATCCGCAGGGTG
CTTTAGGGCAGGGAGCGGATTTCTTGCGAGGATTGGATGAGACGGAGAGG
CAGCGTATGTTGATCGCTCGTCTGTGTTGTGTGTGTTGCTGATTACTGAT
GCCTTTGTGTAGTTTTCCGGGTTGCGCATGATAGTGCTAAGGAGACGCGG
GTCTGGGCTGGAGAGGCGAAAAAGAAATGA
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Coding sequence (CDS) from alignment at OGUI01000013.1:2123412..2124241+

>ATCC64974_80300-T1 ID=ATCC64974_80300-T1|Name=ATCC64974_80300-T1|organism=Aspergillus niger N402|type=CDS|length=3222bp|location=Sequence derived from alignment at OGUI01000013.1:2123412..2124241+ (Aspergillus niger N402)
ATGTCGTACTATGATATAGATGCCATCTTGACAGATTCCCAAAAACTACC
CTGCACATTTGAATTGGACGTACCTGGTCTTGGTATTTTGGAGGGCAATC
CGGGGGAAAATATCAAAGCTGGAACGCGCATTGATTTGCCGTTATGGCTG
GGTGAGATGCTTTCTATCGGTGCCCGACTGGGAACCTCTCGGCTAGTCAC
GCTGGATCTCCCCTCAGCACTCTCAGAACGAGTCATGAATGCCTTGAAAG
CTGATCCTCGGACGGTGGATCTGCGGTCATTGGCGCCGCATTTTTATAGT
CTGAGCGAGAGGATTCTGGAGCTGTTTGAGGAAGAGGAATTGGTGGAGGT
TTTGAGTAATACGTTCAAGAAGCGCTCAGCAGTCATTGCGGACCATGCGC
ATAATCCGCAGGGTGCTTTAGGGCAGGGAGCGGATTTCTTGCGAGGATTG
GATGAGACGGAGAGGCAGCTTTTCCGGGTTGCGCATGATAGTGCTAAGGA
GACGCGGGTCTGGGCTGGAGAGGCGAAAAAGAAATGAATGTCGTACTATG
ATATAGATGCCATCTTGACAGATTCCCAAAAACTACCCTGCACATTTGAA
TTGGACGTACCTGGTCTTGGTATTTTGGAGGGCAATCCGGGGGAAAATAT
CAAAGCTGGAACGCGCATTGATTTGCCGTTATGGCTGGGTGAGATGCTTT
CTATCGGTGCCCGACTGGGAACCTCTCGGCTAGTCACGCTGGATCTCCCC
TCAGCACTCTCAGAACGAGTCATGAATGCCTTGAAAGCTGATCCTCGGAC
GGTGGATCTGCGGTCATTGGCGCCGCATTTTTATAGTCTGAGCGAGAGGA
TTCTGGAGCTGTTTGAGGAAGAGGAATTGGTGGAGGTTTTGAGTAATACG
TTCAAGAAGCGCTCAGCAGTCATTGCGGACCATGCGCATAATCCGCAGGG
TGCTTTAGGGCAGGGAGCGGATTTCTTGCGAGGATTGGATGAGACGGAGA
GGCAGCTTTTCCGGGTTGCGCATGATAGTGCTAAGGAGACGCGGGTCTGG
GCTGGAGAGGCGAAAAAGAAATGAATGTCGTACTATGATATAGATGCCAT
CTTGACAGATTCCCAAAAACTACCCTGCACATTTGAATTGGACGTACCTG
GTCTTGGTATTTTGGAGGGCAATCCGGGGGAAAATATCAAAGCTGGAACG
CGCATTGATTTGCCGTTATGGCTGGGTGAGATGCTTTCTATCGGTGCCCG
ACTGGGAACCTCTCGGCTAGTCACGCTGGATCTCCCCTCAGCACTCTCAG
AACGAGTCATGAATGCCTTGAAAGCTGATCCTCGGACGGTGGATCTGCGG
TCATTGGCGCCGCATTTTTATAGTCTGAGCGAGAGGATTCTGGAGCTGTT
TGAGGAAGAGGAATTGGTGGAGGTTTTGAGTAATACGTTCAAGAAGCGCT
CAGCAGTCATTGCGGACCATGCGCATAATCCGCAGGGTGCTTTAGGGCAG
GGAGCGGATTTCTTGCGAGGATTGGATGAGACGGAGAGGCAGCTTTTCCG
GGTTGCGCATGATAGTGCTAAGGAGACGCGGGTCTGGGCTGGAGAGGCGA
AAAAGAAATGAATGTCGTACTATGATATAGATGCCATCTTGACAGATTCC
CAAAAACTACCCTGCACATTTGAATTGGACGTACCTGGTCTTGGTATTTT
GGAGGGCAATCCGGGGGAAAATATCAAAGCTGGAACGCGCATTGATTTGC
CGTTATGGCTGGGTGAGATGCTTTCTATCGGTGCCCGACTGGGAACCTCT
CGGCTAGTCACGCTGGATCTCCCCTCAGCACTCTCAGAACGAGTCATGAA
TGCCTTGAAAGCTGATCCTCGGACGGTGGATCTGCGGTCATTGGCGCCGC
ATTTTTATAGTCTGAGCGAGAGGATTCTGGAGCTGTTTGAGGAAGAGGAA
TTGGTGGAGGTTTTGAGTAATACGTTCAAGAAGCGCTCAGCAGTCATTGC
GGACCATGCGCATAATCCGCAGGGTGCTTTAGGGCAGGGAGCGGATTTCT
TGCGAGGATTGGATGAGACGGAGAGGCAGCTTTTCCGGGTTGCGCATGAT
AGTGCTAAGGAGACGCGGGTCTGGGCTGGAGAGGCGAAAAAGAAATGAAT
GTCGTACTATGATATAGATGCCATCTTGACAGATTCCCAAAAACTACCCT
GCACATTTGAATTGGACGTACCTGGTCTTGGTATTTTGGAGGGCAATCCG
GGGGAAAATATCAAAGCTGGAACGCGCATTGATTTGCCGTTATGGCTGGG
TGAGATGCTTTCTATCGGTGCCCGACTGGGAACCTCTCGGCTAGTCACGC
TGGATCTCCCCTCAGCACTCTCAGAACGAGTCATGAATGCCTTGAAAGCT
GATCCTCGGACGGTGGATCTGCGGTCATTGGCGCCGCATTTTTATAGTCT
GAGCGAGAGGATTCTGGAGCTGTTTGAGGAAGAGGAATTGGTGGAGGTTT
TGAGTAATACGTTCAAGAAGCGCTCAGCAGTCATTGCGGACCATGCGCAT
AATCCGCAGGGTGCTTTAGGGCAGGGAGCGGATTTCTTGCGAGGATTGGA
TGAGACGGAGAGGCAGCTTTTCCGGGTTGCGCATGATAGTGCTAAGGAGA
CGCGGGTCTGGGCTGGAGAGGCGAAAAAGAAATGAATGTCGTACTATGAT
ATAGATGCCATCTTGACAGATTCCCAAAAACTACCCTGCACATTTGAATT
GGACGTACCTGGTCTTGGTATTTTGGAGGGCAATCCGGGGGAAAATATCA
AAGCTGGAACGCGCATTGATTTGCCGTTATGGCTGGGTGAGATGCTTTCT
ATCGGTGCCCGACTGGGAACCTCTCGGCTAGTCACGCTGGATCTCCCCTC
AGCACTCTCAGAACGAGTCATGAATGCCTTGAAAGCTGATCCTCGGACGG
TGGATCTGCGGTCATTGGCGCCGCATTTTTATAGTCTGAGCGAGAGGATT
CTGGAGCTGTTTGAGGAAGAGGAATTGGTGGAGGTTTTGAGTAATACGTT
CAAGAAGCGCTCAGCAGTCATTGCGGACCATGCGCATAATCCGCAGGGTG
CTTTAGGGCAGGGAGCGGATTTCTTGCGAGGATTGGATGAGACGGAGAGG
CAGCTTTTCCGGGTTGCGCATGATAGTGCTAAGGAGACGCGGGTCTGGGC
TGGAGAGGCGAAAAAGAAATGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PSF3ATCC64974_80300Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_80300-T1ATCC64974_80300-T1-proteinAspergillus niger N402polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_80300-T1.exon1ATCC64974_80300-T1.exon1Aspergillus niger N402exon
ATCC64974_80300-T1.exon2ATCC64974_80300-T1.exon2Aspergillus niger N402exon
ATCC64974_80300-T1.exon3ATCC64974_80300-T1.exon3Aspergillus niger N402exon
ATCC64974_80300-T1.exon4ATCC64974_80300-T1.exon4Aspergillus niger N402exon
ATCC64974_80300-T1.exon5ATCC64974_80300-T1.exon5Aspergillus niger N402exon
ATCC64974_80300-T1.exon6ATCC64974_80300-T1.exon6Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_80300-T1.cdsATCC64974_80300-T1.cdsAspergillus niger N402CDS


Properties
Property NameValue
NoteBUSCO:EOG09264O2D
DBxrefInterPro:IPR036224
DBxrefInterPro:IPR038437
DBxrefInterPro:IPR021151
DBxrefPFAM:PF05916
ProductDNA replication protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:2123412..2124241 +
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