You are here

Home

ATCC64974_80480-T1, ATCC64974_80480-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_80480-T1
Unique NameATCC64974_80480-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:2203290..2206107+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_80480-T1 ID=ATCC64974_80480-T1|Name=ATCC64974_80480-T1|organism=Aspergillus niger N402|type=mRNA|length=2818bp|location=Sequence derived from alignment at OGUI01000013.1:2203290..2206107+ (Aspergillus niger N402)
ATGGCGAGGGACACCGCGCAAACTCCGATCATCCCTCGTCCCCGGCTGCT
TCAGGGCGCCGCCAGTTATCCCTCCGATCTCACCGCCCCCTCGCTGTCTG
CGCCCTTCAAGCTCGACGAGGGTTATTCCGATGAAACGAGAAGCCAGCCC
GACAAGGAGTTTTTGAATTCGCCCCCCGATGATGTGATGCCGCTCCCCGA
CTGGGTTAATGCTTATAGTGAGGCCGAGCGAGCCGGTGAGTTCAGCCCCC
CTTCCCTTGGTCCCGTCCGGCGCAAGGCTCCTCTTCTGTTTGGCTTCTTT
AGCGCGATCATCATCGTACTGACAGGCTGTGGTGTTTCATGTAGAGCTCG
CCTACAAGCTTCTACGCACCTTGCGTGCTTCCACTGTCGCCTCGGTGGTT
GAAAAGCTAGCGCCTCTATTGCACATGGATCCCGTGCTGAAATTACCTCC
GGAGATCACCGCCGAGATCTTTTCCTACCTCGACCCTCAAACGTTGGTAA
CGGCTTCCTTGGCATCTCGCTCCTGGCGTAGTCGCATTTTTGACACCCGC
CTTTGGAGAGACTTATATATCAGCGAAGGCTGGCGGGTCGACATTGACGC
CGTGCATACGTACGAACAGGAACACTCGGGATTGGAATCCCCCCAGCTCC
GAAAATCTCGGTTGAGGCATATAGACCCGGATCTCGGTGAACCGAAACAG
AAGAAGCGCGTACCCCCCAGCTGGCTAGACTCTCGCGCAGCAGGATCACT
GGATAACAATGAGGCCGTGCAAGGAAATGGGCTGCAGCCCTCCGCAGCGG
CGGATATTGAAGGCGATCATCCCATGAGTGATGCGTCAAACGATCGAGGA
CCGGCGATCGCACCTGGGCAACAATCATCTAGCGCCCGCCATGAGTCGTC
AGGAACTGCCCAATCGAAGTCACATTTGCAGCAAATTTCTACGAACTCTA
GCCCCCCCAAATCGCCACTATTAATTCGAATGCCCAATGGCGCTGCAAAG
ATGAATTGGCCGCATCTGTATCGGGTACGGAGGCGGCTGGAAGAGAACTG
GGCCAAGGGCCGTTTCACGAACTTTCAACTGCCCCATCCGAATCACATGG
AAGAATCTCACCAAGAGTGTGTATATGCGATCCAGTTTACCGAGAAATGG
TTGGTCAGTGGTAGTCGGGATAAGACTGTTCGAGTATGGGACCTGGACAC
GAAGCGACTATGGCATCCGCCTCTCCAAGGCCACTCAAAATCGGTTCTCT
GTCTTCAGTTCGACCCCCGCCCATCTGAAGATATCATTGTGTCGGGAAGC
AGCGACAAGAATGTGATAATTTGGCGCTTTTCCACTGGAGAGAAGCTTCA
CGAAATTGCGCCAGCTCATGATGACTCTGTCCTGAATCTCCGATTCGACG
AACGCTATATAGTAACTTGCTCCAAGGACAAGCTTATCAAGGTCTGGAAC
AGGCGTCATCTCAGTCCGTTGGACAAGGACTACCCCTCTGTTTTTCAGGG
CTCGGGCGTCTCCTATCCGTCGTATATTGTCAACACAAGCGACGTCCCCG
CTTTCGTACTTGAAGCCGAAATCGCCAAGAATCACATCAGAACTTTAGCC
CCATACTCATTGCTAATGATCCTTGACGGACATACAGCCGCAGTGAATGC
TATTCAGCTCAACGAGGATGAGATCGTGTCCGCCTCGGGCGATCGCTTGA
TCAAGGTCTGGAATCTGCGCAACGGCGCTTGTAGAAAGACAATGATAGGC
CACGAAAAAGGCATTGCGTGCGTGCAGTTCGACAGCAAACGTATAATCAG
CGGAAGCAACGATGATACAGTTCGCATTTTCGACCACGCCTCCGGTGCCG
AAGTGGCCTGCCTGCACGGACATGCCAACCTCGTTCGGACAGTTCAAGCT
GGTTTCGGAGACCCACCGGGAGCCGAGGAGGCCTTACGACTGGAAGCTCT
GGCTGTCGACAACGAGTTCCGTGACGCCCAGCGCACCAACGCAAACGTTG
ACCTTGGCCCTAGTGCCCTTCGGCGCGCAGGATATCAGCAGAACACCAAC
GGGTCTCGGAACCCCAGAGACATCAAAGCACTGGGCGCCAAAATCCCTCC
AGGGGGAGGCGGAAGCCAATGGGGACGAATCGTCTCCGGCTCATACGACG
AGACCATCATCATCTGGAAAAAGGATAATGAAGGCCGCTGGGTTGTAGGC
CAGAGACTCCGACAGGCAGACGCCGCTGCGAATGCCTCATACAGCCACTT
AGATTCCGCTGCACGCCAGACAATCGTACGAGCCAACGCCTTTGCTCAAG
CGCACCAGGCGCAACAAGCCCAAGCTACCATGGCAGCCGCCGCGATATCA
GCAGGCGGTGGAGCACCACAGCAAGGCCAGAACCAGCAGCATCAAACACA
ACCACCACGATTGCCTACAACCAACTCCAACACCCACGACCCCTCATCAC
ATAATGCACCCTGGCCCGCGCACCTAGCCTTGAACCCGGCCCTCCTCATC
TCCAACAACCTTCCCCCCACCGTCCAGCAAAGCACATCTCAAGCTCAAGC
TCAAGCTCCAGCTCCCCCGCCCATCATGCATGCCGGCGCTCCAATGAGAC
CACCACCACTACCACCGCATGCTCAGCAACAGCAACACCCCCGAGTGAGA
GCCTTCCCTGCCGCCCCCCACCAACCACCTACCTCGAGGATCTTCAAGCT
CCAATTCGACGCGCACAAGATAATTTGCGCAAGCCAGGACCCGAGAATAG
TAGGGTGGGATTTTACTGCTGATGATGAGGAACTCAAAGAGGCGTGTCAG
TTCTTTAAGGGGCTGTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000013.1:2203290..2206107+

>ATCC64974_80480-T1 ID=ATCC64974_80480-T1|Name=ATCC64974_80480-T1|organism=Aspergillus niger N402|type=CDS|length=5418bp|location=Sequence derived from alignment at OGUI01000013.1:2203290..2206107+ (Aspergillus niger N402)
ATGGCGAGGGACACCGCGCAAACTCCGATCATCCCTCGTCCCCGGCTGCT
TCAGGGCGCCGCCAGTTATCCCTCCGATCTCACCGCCCCCTCGCTGTCTG
CGCCCTTCAAGCTCGACGAGGGTTATTCCGATGAAACGAGAAGCCAGCCC
GACAAGGAGTTTTTGAATTCGCCCCCCGATGATGTGATGCCGCTCCCCGA
CTGGGTTAATGCTTATAGTGAGGCCGAGCGAGCCGAGCTCGCCTACAAGC
TTCTACGCACCTTGCGTGCTTCCACTGTCGCCTCGGTGGTTGAAAAGCTA
GCGCCTCTATTGCACATGGATCCCGTGCTGAAATTACCTCCGGAGATCAC
CGCCGAGATCTTTTCCTACCTCGACCCTCAAACGTTGGTAACGGCTTCCT
TGGCATCTCGCTCCTGGCGTAGTCGCATTTTTGACACCCGCCTTTGGAGA
GACTTATATATCAGCGAAGGCTGGCGGGTCGACATTGACGCCGTGCATAC
GTACGAACAGGAACACTCGGGATTGGAATCCCCCCAGCTCCGAAAATCTC
GGTTGAGGCATATAGACCCGGATCTCGGTGAACCGAAACAGAAGAAGCGC
GTACCCCCCAGCTGGCTAGACTCTCGCGCAGCAGGATCACTGGATAACAA
TGAGGCCGTGCAAGGAAATGGGCTGCAGCCCTCCGCAGCGGCGGATATTG
AAGGCGATCATCCCATGAGTGATGCGTCAAACGATCGAGGACCGGCGATC
GCACCTGGGCAACAATCATCTAGCGCCCGCCATGAGTCGTCAGGAACTGC
CCAATCGAAGTCACATTTGCAGCAAATTTCTACGAACTCTAGCCCCCCCA
AATCGCCACTATTAATTCGAATGCCCAATGGCGCTGCAAAGATGAATTGG
CCGCATCTGTATCGGGTACGGAGGCGGCTGGAAGAGAACTGGGCCAAGGG
CCGTTTCACGAACTTTCAACTGCCCCATCCGAATCACATGGAAGAATCTC
ACCAAGAGTGTGTATATGCGATCCAGTTTACCGAGAAATGGTTGGTCAGT
GGTAGTCGGGATAAGACTGTTCGAGTATGGGACCTGGACACGAAGCGACT
ATGGCATCCGCCTCTCCAAGGCCACTCAAAATCGGTTCTCTGTCTTCAGT
TCGACCCCCGCCCATCTGAAGATATCATTGTGTCGGGAAGCAGCGACAAG
AATGTGATAATTTGGCGCTTTTCCACTGGAGAGAAGCTTCACGAAATTGC
GCCAGCTCATGATGACTCTGTCCTGAATCTCCGATTCGACGAACGCTATA
TAGTAACTTGCTCCAAGGACAAGCTTATCAAGGTCTGGAACAGGCGTCAT
CTCAGTCCGTTGGACAAGGACTACCCCTCTGTTTTTCAGGGCTCGGGCGT
CTCCTATCCGTCGTATATTGTCAACACAAGCGACGTCCCCGCTTTCGTAC
TTGAAGCCGAAATCGCCAAGAATCACATCAGAACTTTAGCCCCATACTCA
TTGCTAATGATCCTTGACGGACATACAGCCGCAGTGAATGCTATTCAGCT
CAACGAGGATGAGATCGTGTCCGCCTCGGGCGATCGCTTGATCAAGGTCT
GGAATCTGCGCAACGGCGCTTGTAGAAAGACAATGATAGGCCACGAAAAA
GGCATTGCGTGCGTGCAGTTCGACAGCAAACGTATAATCAGCGGAAGCAA
CGATGATACAGTTCGCATTTTCGACCACGCCTCCGGTGCCGAAGTGGCCT
GCCTGCACGGACATGCCAACCTCGTTCGGACAGTTCAAGCTGGTTTCGGA
GACCCACCGGGAGCCGAGGAGGCCTTACGACTGGAAGCTCTGGCTGTCGA
CAACGAGTTCCGTGACGCCCAGCGCACCAACGCAAACGTTGACCTTGGCC
CTAGTGCCCTTCGGCGCGCAGGATATCAGCAGAACACCAACGGGTCTCGG
AACCCCAGAGACATCAAAGCACTGGGCGCCAAAATCCCTCCAGGGGGAGG
CGGAAGCCAATGGGGACGAATCGTCTCCGGCTCATACGACGAGACCATCA
TCATCTGGAAAAAGGATAATGAAGGCCGCTGGGTTGTAGGCCAGAGACTC
CGACAGGCAGACGCCGCTGCGAATGCCTCATACAGCCACTTAGATTCCGC
TGCACGCCAGACAATCGTACGAGCCAACGCCTTTGCTCAAGCGCACCAGG
CGCAACAAGCCCAAGCTACCATGGCAGCCGCCGCGATATCAGCAGGCGGT
GGAGCACCACAGCAAGGCCAGAACCAGCAGCATCAAACACAACCACCACG
ATTGCCTACAACCAACTCCAACACCCACGACCCCTCATCACATAATGCAC
CCTGGCCCGCGCACCTAGCCTTGAACCCGGCCCTCCTCATCTCCAACAAC
CTTCCCCCCACCGTCCAGCAAAGCACATCTCAAGCTCAAGCTCAAGCTCC
AGCTCCCCCGCCCATCATGCATGCCGGCGCTCCAATGAGACCACCACCAC
TACCACCGCATGCTCAGCAACAGCAACACCCCCGAGTGAGAGCCTTCCCT
GCCGCCCCCCACCAACCACCTACCTCGAGGATCTTCAAGCTCCAATTCGA
CGCGCACAAGATAATTTGCGCAAGCCAGGACCCGAGAATAGTAGGGTGGG
ATTTTACTGCTGATGATGAGGAACTCAAAGAGGCGTGTCAGTTCTTTAAG
GGGCTGTGAATGGCGAGGGACACCGCGCAAACTCCGATCATCCCTCGTCC
CCGGCTGCTTCAGGGCGCCGCCAGTTATCCCTCCGATCTCACCGCCCCCT
CGCTGTCTGCGCCCTTCAAGCTCGACGAGGGTTATTCCGATGAAACGAGA
AGCCAGCCCGACAAGGAGTTTTTGAATTCGCCCCCCGATGATGTGATGCC
GCTCCCCGACTGGGTTAATGCTTATAGTGAGGCCGAGCGAGCCGAGCTCG
CCTACAAGCTTCTACGCACCTTGCGTGCTTCCACTGTCGCCTCGGTGGTT
GAAAAGCTAGCGCCTCTATTGCACATGGATCCCGTGCTGAAATTACCTCC
GGAGATCACCGCCGAGATCTTTTCCTACCTCGACCCTCAAACGTTGGTAA
CGGCTTCCTTGGCATCTCGCTCCTGGCGTAGTCGCATTTTTGACACCCGC
CTTTGGAGAGACTTATATATCAGCGAAGGCTGGCGGGTCGACATTGACGC
CGTGCATACGTACGAACAGGAACACTCGGGATTGGAATCCCCCCAGCTCC
GAAAATCTCGGTTGAGGCATATAGACCCGGATCTCGGTGAACCGAAACAG
AAGAAGCGCGTACCCCCCAGCTGGCTAGACTCTCGCGCAGCAGGATCACT
GGATAACAATGAGGCCGTGCAAGGAAATGGGCTGCAGCCCTCCGCAGCGG
CGGATATTGAAGGCGATCATCCCATGAGTGATGCGTCAAACGATCGAGGA
CCGGCGATCGCACCTGGGCAACAATCATCTAGCGCCCGCCATGAGTCGTC
AGGAACTGCCCAATCGAAGTCACATTTGCAGCAAATTTCTACGAACTCTA
GCCCCCCCAAATCGCCACTATTAATTCGAATGCCCAATGGCGCTGCAAAG
ATGAATTGGCCGCATCTGTATCGGGTACGGAGGCGGCTGGAAGAGAACTG
GGCCAAGGGCCGTTTCACGAACTTTCAACTGCCCCATCCGAATCACATGG
AAGAATCTCACCAAGAGTGTGTATATGCGATCCAGTTTACCGAGAAATGG
TTGGTCAGTGGTAGTCGGGATAAGACTGTTCGAGTATGGGACCTGGACAC
GAAGCGACTATGGCATCCGCCTCTCCAAGGCCACTCAAAATCGGTTCTCT
GTCTTCAGTTCGACCCCCGCCCATCTGAAGATATCATTGTGTCGGGAAGC
AGCGACAAGAATGTGATAATTTGGCGCTTTTCCACTGGAGAGAAGCTTCA
CGAAATTGCGCCAGCTCATGATGACTCTGTCCTGAATCTCCGATTCGACG
AACGCTATATAGTAACTTGCTCCAAGGACAAGCTTATCAAGGTCTGGAAC
AGGCGTCATCTCAGTCCGTTGGACAAGGACTACCCCTCTGTTTTTCAGGG
CTCGGGCGTCTCCTATCCGTCGTATATTGTCAACACAAGCGACGTCCCCG
CTTTCGTACTTGAAGCCGAAATCGCCAAGAATCACATCAGAACTTTAGCC
CCATACTCATTGCTAATGATCCTTGACGGACATACAGCCGCAGTGAATGC
TATTCAGCTCAACGAGGATGAGATCGTGTCCGCCTCGGGCGATCGCTTGA
TCAAGGTCTGGAATCTGCGCAACGGCGCTTGTAGAAAGACAATGATAGGC
CACGAAAAAGGCATTGCGTGCGTGCAGTTCGACAGCAAACGTATAATCAG
CGGAAGCAACGATGATACAGTTCGCATTTTCGACCACGCCTCCGGTGCCG
AAGTGGCCTGCCTGCACGGACATGCCAACCTCGTTCGGACAGTTCAAGCT
GGTTTCGGAGACCCACCGGGAGCCGAGGAGGCCTTACGACTGGAAGCTCT
GGCTGTCGACAACGAGTTCCGTGACGCCCAGCGCACCAACGCAAACGTTG
ACCTTGGCCCTAGTGCCCTTCGGCGCGCAGGATATCAGCAGAACACCAAC
GGGTCTCGGAACCCCAGAGACATCAAAGCACTGGGCGCCAAAATCCCTCC
AGGGGGAGGCGGAAGCCAATGGGGACGAATCGTCTCCGGCTCATACGACG
AGACCATCATCATCTGGAAAAAGGATAATGAAGGCCGCTGGGTTGTAGGC
CAGAGACTCCGACAGGCAGACGCCGCTGCGAATGCCTCATACAGCCACTT
AGATTCCGCTGCACGCCAGACAATCGTACGAGCCAACGCCTTTGCTCAAG
CGCACCAGGCGCAACAAGCCCAAGCTACCATGGCAGCCGCCGCGATATCA
GCAGGCGGTGGAGCACCACAGCAAGGCCAGAACCAGCAGCATCAAACACA
ACCACCACGATTGCCTACAACCAACTCCAACACCCACGACCCCTCATCAC
ATAATGCACCCTGGCCCGCGCACCTAGCCTTGAACCCGGCCCTCCTCATC
TCCAACAACCTTCCCCCCACCGTCCAGCAAAGCACATCTCAAGCTCAAGC
TCAAGCTCCAGCTCCCCCGCCCATCATGCATGCCGGCGCTCCAATGAGAC
CACCACCACTACCACCGCATGCTCAGCAACAGCAACACCCCCGAGTGAGA
GCCTTCCCTGCCGCCCCCCACCAACCACCTACCTCGAGGATCTTCAAGCT
CCAATTCGACGCGCACAAGATAATTTGCGCAAGCCAGGACCCGAGAATAG
TAGGGTGGGATTTTACTGCTGATGATGAGGAACTCAAAGAGGCGTGTCAG
TTCTTTAAGGGGCTGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_80480ATCC64974_80480Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_80480-T1.exon1ATCC64974_80480-T1.exon1Aspergillus niger N402exon
ATCC64974_80480-T1.exon2ATCC64974_80480-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_80480-T1.cdsATCC64974_80480-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_80480-T1ATCC64974_80480-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR001810
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
DBxrefPFAM:PF12937
DBxrefPFAM:PF00646
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:2203290..2206107 +
Powered by Drupal