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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000002.1:242701..244055+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_8170-T1 ID=ATCC64974_8170-T1|Name=ATCC64974_8170-T1|organism=Aspergillus niger N402|type=mRNA|length=1355bp|location=Sequence derived from alignment at OGUI01000002.1:242701..244055+ (Aspergillus niger N402)
ATGACGGACTCGGCATCGCCTGCGAAGCCCGTCCATACCATCGTCCTGGA
CGCCGGTCCCATCTTGAAGAATACCCCGCCGCTATCCACGCTGCTCGCAC
AATGCGAAGAACTCCTCATCACCCCCTCCGTCGTGAGCGAAATCCGTGAC
CCTGACGCCCGCCAGCGCGTGGAGACACTATACCTTCCCTTCTTGAAGCA
GCGCACACCATCCCCGAAAAGCGTCAGCGTCTTGAGCGAATTTGCACGCA
AGACTGGTGATCGGGCTGTCCTGAGTAAAACAGATATTGAGGTACTGGCG
CTTGCATACGAGGTGGAATGCGAGCGCAATGGTGGCGACTGGAGACTGAG
AAGCGTTCCGGGGCAGAAACAGGTGAACGGGAAGCCTCCGGTGAAGGAGG
AGAAGGCCGAAGAGAAGGGAGAGGAGGCTAAAGCCGAAGAGGCCAAGGGT
GAGACTGAGGGCGAGACCACTCAAAAGGAGGAGAACAAGGACGAGGTTGC
TGAGGTGGATGCCGTTGCAGAAGATCTGAAGAACGCAAACCTGGAAGACA
AGGAGACCAGCACACAGGAGACCGAAGTGCAAAATGCCCCCGCAGAGGTC
GAGGCGGAGGAATCAACTCCTCAGGACGCCGATGCCCAAGAGGAGGAAGA
TGATGGCGATGATTCGGATGGTGGTTGGATCACTCCCTCCAACTTGAAGA
AGCGACAGGCCCGCGATGAGGCTAGCTCTGCGGCTGCGGCGCCAGAGCCC
AAGGTGATGCAGGTTGCCACCATGACTACCGATTTTGCGGTATGCTTTGA
AACTTACTTCAATGTCCATGTTCCTTACTAACTATAATAAAGTGCCAAAA
CGTGCTGCTGCAGATGAACTTGAACTTGCTCTCCACTTCCACTCTGCAGC
GAATCCGCCATCTGAAGTCTTTCATCAAGCGCTGCCATGCCTGTTTCTTC
ACCACCAAGGACATGAACAAGCAATTTTGTCCCCGCTGCGGCAAGGACAC
GCTCACTCGTGTCTCCTGCACGACAGACGCGAATGGACAGTTCAAGATGC
ACCTGAAAAAGAACATGCAGTGGAACAACCGCGGCAATCGTTTCAGTGTT
CCTAAGCCCGTACACGGCACCTCCAATGGAAAGTGGAAGGGAGGTGGTGG
TAAGGGTGGCTGGGGAACGGAATTGATCCTGGCGGAAGACCAGAAGGAGT
ATGTTCGAGCCACCGCAGAGCAGAGCCGCAGAATGCGCAAGGAGCACGAC
CTCATGGATGAGGACTACCTCCCGAGCATCCTGACCGGAGAGCGGAACAA
TCACGGTCGAATTCGTGTGGGAGCTGGCAGAAATGTCAACTCGAGGAAGC
GGTAA back to topCoding sequence (CDS) from alignment at OGUI01000002.1:242701..244055+ >ATCC64974_8170-T1 ID=ATCC64974_8170-T1|Name=ATCC64974_8170-T1|organism=Aspergillus niger N402|type=CDS|length=2604bp|location=Sequence derived from alignment at OGUI01000002.1:242701..244055+ (Aspergillus niger N402)
ATGACGGACTCGGCATCGCCTGCGAAGCCCGTCCATACCATCGTCCTGGA
CGCCGGTCCCATCTTGAAGAATACCCCGCCGCTATCCACGCTGCTCGCAC
AATGCGAAGAACTCCTCATCACCCCCTCCGTCGTGAGCGAAATCCGTGAC
CCTGACGCCCGCCAGCGCGTGGAGACACTATACCTTCCCTTCTTGAAGCA
GCGCACACCATCCCCGAAAAGCGTCAGCGTCTTGAGCGAATTTGCACGCA
AGACTGGTGATCGGGCTGTCCTGAGTAAAACAGATATTGAGGTACTGGCG
CTTGCATACGAGGTGGAATGCGAGCGCAATGGTGGCGACTGGAGACTGAG
AAGCGTTCCGGGGCAGAAACAGGTGAACGGGAAGCCTCCGGTGAAGGAGG
AGAAGGCCGAAGAGAAGGGAGAGGAGGCTAAAGCCGAAGAGGCCAAGGGT
GAGACTGAGGGCGAGACCACTCAAAAGGAGGAGAACAAGGACGAGGTTGC
TGAGGTGGATGCCGTTGCAGAAGATCTGAAGAACGCAAACCTGGAAGACA
AGGAGACCAGCACACAGGAGACCGAAGTGCAAAATGCCCCCGCAGAGGTC
GAGGCGGAGGAATCAACTCCTCAGGACGCCGATGCCCAAGAGGAGGAAGA
TGATGGCGATGATTCGGATGGTGGTTGGATCACTCCCTCCAACTTGAAGA
AGCGACAGGCCCGCGATGAGGCTAGCTCTGCGGCTGCGGCGCCAGAGCCC
AAGGTGATGCAGGTTGCCACCATGACTACCGATTTTGCGTGCCAAAACGT
GCTGCTGCAGATGAACTTGAACTTGCTCTCCACTTCCACTCTGCAGCGAA
TCCGCCATCTGAAGTCTTTCATCAAGCGCTGCCATGCCTGTTTCTTCACC
ACCAAGGACATGAACAAGCAATTTTGTCCCCGCTGCGGCAAGGACACGCT
CACTCGTGTCTCCTGCACGACAGACGCGAATGGACAGTTCAAGATGCACC
TGAAAAAGAACATGCAGTGGAACAACCGCGGCAATCGTTTCAGTGTTCCT
AAGCCCGTACACGGCACCTCCAATGGAAAGTGGAAGGGAGGTGGTGGTAA
GGGTGGCTGGGGAACGGAATTGATCCTGGCGGAAGACCAGAAGGAGTATG
TTCGAGCCACCGCAGAGCAGAGCCGCAGAATGCGCAAGGAGCACGACCTC
ATGGATGAGGACTACCTCCCGAGCATCCTGACCGGAGAGCGGAACAATCA
CGGTCGAATTCGTGTGGGAGCTGGCAGAAATGTCAACTCGAGGAAGCGGT
AAATGACGGACTCGGCATCGCCTGCGAAGCCCGTCCATACCATCGTCCTG
GACGCCGGTCCCATCTTGAAGAATACCCCGCCGCTATCCACGCTGCTCGC
ACAATGCGAAGAACTCCTCATCACCCCCTCCGTCGTGAGCGAAATCCGTG
ACCCTGACGCCCGCCAGCGCGTGGAGACACTATACCTTCCCTTCTTGAAG
CAGCGCACACCATCCCCGAAAAGCGTCAGCGTCTTGAGCGAATTTGCACG
CAAGACTGGTGATCGGGCTGTCCTGAGTAAAACAGATATTGAGGTACTGG
CGCTTGCATACGAGGTGGAATGCGAGCGCAATGGTGGCGACTGGAGACTG
AGAAGCGTTCCGGGGCAGAAACAGGTGAACGGGAAGCCTCCGGTGAAGGA
GGAGAAGGCCGAAGAGAAGGGAGAGGAGGCTAAAGCCGAAGAGGCCAAGG
GTGAGACTGAGGGCGAGACCACTCAAAAGGAGGAGAACAAGGACGAGGTT
GCTGAGGTGGATGCCGTTGCAGAAGATCTGAAGAACGCAAACCTGGAAGA
CAAGGAGACCAGCACACAGGAGACCGAAGTGCAAAATGCCCCCGCAGAGG
TCGAGGCGGAGGAATCAACTCCTCAGGACGCCGATGCCCAAGAGGAGGAA
GATGATGGCGATGATTCGGATGGTGGTTGGATCACTCCCTCCAACTTGAA
GAAGCGACAGGCCCGCGATGAGGCTAGCTCTGCGGCTGCGGCGCCAGAGC
CCAAGGTGATGCAGGTTGCCACCATGACTACCGATTTTGCGTGCCAAAAC
GTGCTGCTGCAGATGAACTTGAACTTGCTCTCCACTTCCACTCTGCAGCG
AATCCGCCATCTGAAGTCTTTCATCAAGCGCTGCCATGCCTGTTTCTTCA
CCACCAAGGACATGAACAAGCAATTTTGTCCCCGCTGCGGCAAGGACACG
CTCACTCGTGTCTCCTGCACGACAGACGCGAATGGACAGTTCAAGATGCA
CCTGAAAAAGAACATGCAGTGGAACAACCGCGGCAATCGTTTCAGTGTTC
CTAAGCCCGTACACGGCACCTCCAATGGAAAGTGGAAGGGAGGTGGTGGT
AAGGGTGGCTGGGGAACGGAATTGATCCTGGCGGAAGACCAGAAGGAGTA
TGTTCGAGCCACCGCAGAGCAGAGCCGCAGAATGCGCAAGGAGCACGACC
TCATGGATGAGGACTACCTCCCGAGCATCCTGACCGGAGAGCGGAACAAT
CACGGTCGAATTCGTGTGGGAGCTGGCAGAAATGTCAACTCGAGGAAGCG
GTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004521 | endoribonuclease activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0042274 | ribosomal small subunit biogenesis |
| GO:0000469 | cleavage involved in rRNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_8170-T1 | ATCC64974_8170-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092620U5 |
| DBxref | InterPro:IPR033411 |
| DBxref | InterPro:IPR017117 |
| DBxref | InterPro:IPR014881 |
| DBxref | InterPro:IPR036283 |
| DBxref | PFAM:PF17146 |
| DBxref | PFAM:PF08772 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000002.1 | supercontig | OGUI01000002.1:242701..244055 + |
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