You are here

Home

ATCC64974_81780-T1, ATCC64974_81780-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_81780-T1
Unique NameATCC64974_81780-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:2664786..2665840+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_81780-T1 ID=ATCC64974_81780-T1|Name=ATCC64974_81780-T1|organism=Aspergillus niger N402|type=mRNA|length=1055bp|location=Sequence derived from alignment at OGUI01000013.1:2664786..2665840+ (Aspergillus niger N402)
ATGCCTATCACAGGGTAAGCGCTGATCAGTCATCACATATACTCACATCA
TGCTGACTCCAACCAACCAGAGTCTACTTCATCCCCTCCAACCCAAATGC
ATCCACAGGGCTAGCGACTATCACAGAGCGCCTACACACAGCCCTAGCAG
ACGAGCCAACATTAGTAGGCCGTTGGTTCCTCGAACACCGACTGATGCGC
GATACTCCATCATGTGTTCCTGCCTCAGCATCCCAGCGCCAAGTACAACC
GCGCTATATGCAATTCCTATCACTGTCTTTTCACTCTAACCACGGCTTCA
TCTACACCTCTGAAGCACTAGAGAAAAGCACTCATCATTCCACCACCAGT
GTTAGCACCACGCCAGCTGGCTCACCCACCAATTCTACTGCTCAAAGTGG
AGCTCCAGGCGCAACAGCGCCCACCCCTTCCACCCCATCTAATGCTGCTG
CACAGTCAGGAGGACCAATGGTGATGACCACCGTGCCGCTTCCATCCTGT
AATGCACTTTTCCAGCACTTCGGCTACGCCTGCCAGCCTTTCTGGTGCCA
TCGACACACGGTAACCGTACCAGGCGGTGTGGTCTACGATGTGGGCGATT
TCCGAGTCCGAGTGGGTGATGTACGACAGACTCAGCCAGCAGCGAGGGTG
CGCGGAACAGTTGTGGAAATTGAATGGCGGGGTCCGTGCATAGTTGATGC
GATTTCAGCACCACGGAATTCGAGCGACGGACAAATAGCTGATGATGGCG
ACTCCGGGATTGATATGGCGTTCCCGGATGCTATTGAAGACGCGGATATT
GATGCAGAGTATGCGGCTAGTGCGGCGTTGATTAGGGAGTTCTGGGCGAG
ACTCGGCATTGAAGGAGCCAGAGAAGCTATTTTGTTGCCGGATGTAGGCA
AGGAAGCCAAGGATCGGTTGAGGAGATTGAAGCAGAAGGGCCGAAATACT
GTTTCTAACGAGGCGAGTCTACAGCAAGCGGAGGAGGATCCGGATCCGGA
TGCGGGTGTGGATGTGGCGAGGCAGTTTATGGAGATTTTTAGGTTTAATC
GGTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000013.1:2664786..2665840+

>ATCC64974_81780-T1 ID=ATCC64974_81780-T1|Name=ATCC64974_81780-T1|organism=Aspergillus niger N402|type=CDS|length=1998bp|location=Sequence derived from alignment at OGUI01000013.1:2664786..2665840+ (Aspergillus niger N402)
ATGCCTATCACAGGAGTCTACTTCATCCCCTCCAACCCAAATGCATCCAC
AGGGCTAGCGACTATCACAGAGCGCCTACACACAGCCCTAGCAGACGAGC
CAACATTAGTAGGCCGTTGGTTCCTCGAACACCGACTGATGCGCGATACT
CCATCATGTGTTCCTGCCTCAGCATCCCAGCGCCAAGTACAACCGCGCTA
TATGCAATTCCTATCACTGTCTTTTCACTCTAACCACGGCTTCATCTACA
CCTCTGAAGCACTAGAGAAAAGCACTCATCATTCCACCACCAGTGTTAGC
ACCACGCCAGCTGGCTCACCCACCAATTCTACTGCTCAAAGTGGAGCTCC
AGGCGCAACAGCGCCCACCCCTTCCACCCCATCTAATGCTGCTGCACAGT
CAGGAGGACCAATGGTGATGACCACCGTGCCGCTTCCATCCTGTAATGCA
CTTTTCCAGCACTTCGGCTACGCCTGCCAGCCTTTCTGGTGCCATCGACA
CACGGTAACCGTACCAGGCGGTGTGGTCTACGATGTGGGCGATTTCCGAG
TCCGAGTGGGTGATGTACGACAGACTCAGCCAGCAGCGAGGGTGCGCGGA
ACAGTTGTGGAAATTGAATGGCGGGGTCCGTGCATAGTTGATGCGATTTC
AGCACCACGGAATTCGAGCGACGGACAAATAGCTGATGATGGCGACTCCG
GGATTGATATGGCGTTCCCGGATGCTATTGAAGACGCGGATATTGATGCA
GAGTATGCGGCTAGTGCGGCGTTGATTAGGGAGTTCTGGGCGAGACTCGG
CATTGAAGGAGCCAGAGAAGCTATTTTGTTGCCGGATGTAGGCAAGGAAG
CCAAGGATCGGTTGAGGAGATTGAAGCAGAAGGGCCGAAATACTGTTTCT
AACGAGGCGAGTCTACAGCAAGCGGAGGAGGATCCGGATCCGGATGCGGG
TGTGGATGTGGCGAGGCAGTTTATGGAGATTTTTAGGTTTAATCGGTAAA
TGCCTATCACAGGAGTCTACTTCATCCCCTCCAACCCAAATGCATCCACA
GGGCTAGCGACTATCACAGAGCGCCTACACACAGCCCTAGCAGACGAGCC
AACATTAGTAGGCCGTTGGTTCCTCGAACACCGACTGATGCGCGATACTC
CATCATGTGTTCCTGCCTCAGCATCCCAGCGCCAAGTACAACCGCGCTAT
ATGCAATTCCTATCACTGTCTTTTCACTCTAACCACGGCTTCATCTACAC
CTCTGAAGCACTAGAGAAAAGCACTCATCATTCCACCACCAGTGTTAGCA
CCACGCCAGCTGGCTCACCCACCAATTCTACTGCTCAAAGTGGAGCTCCA
GGCGCAACAGCGCCCACCCCTTCCACCCCATCTAATGCTGCTGCACAGTC
AGGAGGACCAATGGTGATGACCACCGTGCCGCTTCCATCCTGTAATGCAC
TTTTCCAGCACTTCGGCTACGCCTGCCAGCCTTTCTGGTGCCATCGACAC
ACGGTAACCGTACCAGGCGGTGTGGTCTACGATGTGGGCGATTTCCGAGT
CCGAGTGGGTGATGTACGACAGACTCAGCCAGCAGCGAGGGTGCGCGGAA
CAGTTGTGGAAATTGAATGGCGGGGTCCGTGCATAGTTGATGCGATTTCA
GCACCACGGAATTCGAGCGACGGACAAATAGCTGATGATGGCGACTCCGG
GATTGATATGGCGTTCCCGGATGCTATTGAAGACGCGGATATTGATGCAG
AGTATGCGGCTAGTGCGGCGTTGATTAGGGAGTTCTGGGCGAGACTCGGC
ATTGAAGGAGCCAGAGAAGCTATTTTGTTGCCGGATGTAGGCAAGGAAGC
CAAGGATCGGTTGAGGAGATTGAAGCAGAAGGGCCGAAATACTGTTTCTA
ACGAGGCGAGTCTACAGCAAGCGGAGGAGGATCCGGATCCGGATGCGGGT
GTGGATGTGGCGAGGCAGTTTATGGAGATTTTTAGGTTTAATCGGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016592mediator complex
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
Vocabulary: Molecular Function
TermDefinition
GO:0003712transcription coregulator activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_81780ATCC64974_81780Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_81780-T1.exon1ATCC64974_81780-T1.exon1Aspergillus niger N402exon
ATCC64974_81780-T1.exon2ATCC64974_81780-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_81780-T1.cdsATCC64974_81780-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_81780-T1ATCC64974_81780-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR013921
DBxrefPFAM:PF08612
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:2664786..2665840 +
Powered by Drupal