You are here

Home

ATCC64974_81790-T1, ATCC64974_81790-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_81790-T1
Unique NameATCC64974_81790-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:2666594..2667484-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_81790-T1 ID=ATCC64974_81790-T1|Name=ATCC64974_81790-T1|organism=Aspergillus niger N402|type=mRNA|length=891bp|location=Sequence derived from alignment at OGUI01000013.1:2666594..2667484- (Aspergillus niger N402)
ATGGTATGTGCCTTCTTCCTCGCTGTCCCGGCCAGTTGTGTTGAAAATCC
CCCACTTTGCGGGGCAGATCTGCCTGGCATTCTCAACAGGATTGCTGACA
TCGCATCGTCTAGGCCGACTCTCTGACCGAAGAGCAAGTTTCTGAGTACA
AGGAGGCCTTCTCCCTCTTTGTGAGTGCTCCCTGAATGACCCTCCGATCA
TCCTGATCGATGAGCTATCTTTACCGGAGCATAATGCTAATGTGTTTTCG
GACTTAATAGGACAAGGATGGCGATGGTGGGTGGAATTCTATCCCCTTCA
CATTATACCTGTAGCGCTCGATCCGACTGCGGGATTTCGACAGCATTTTC
CAGAACGATTTGGATCATAATACTAATTTAAATCGGTGAATCAGGCCAGA
TCACCACCAAGGAGCTCGGCACTGTGATGCGCTCCCTTGGCCAGAACCCC
TCCGAGTCTGAGCTTCAGGACATGATCAACGAGGTTGACGCTGACAACAA
CGGAACGATCGACTTCCCCGGTATGTGTTAGATTTACGCCTGTAAGGCGG
AAATGCGGGCTGGATTGTGATTGACTTTTGCCGCCAGAATTCCTTACCAT
GATGGCTCGTAAGATGAAGGACACCGACTCCGAGGAGGAAATCCGCGAGG
CTTTCAAGGTCTTCGACCGCGACAACAATGGTTTTATCTCCGCCGCGGAG
CTGCGCCACGTCATGACCTCCATTGGCGAGAAGCTCACCGACGACGAAGT
CGATGAGATGATCCGTGAGGCGGACCAGGACGGTGATGGCCGCATCGACT
GTATGTTTACCATGCCCGATTATACTCATAACATAACATACTGACTCTGC
TACCAGACAACGAGTTCGTCCAGCTCATGATGCAAAAATAA
back to top

Coding sequence (CDS) from alignment at OGUI01000013.1:2666594..2667484-

>ATCC64974_81790-T1 ID=ATCC64974_81790-T1|Name=ATCC64974_81790-T1|organism=Aspergillus niger N402|type=CDS|length=2700bp|location=Sequence derived from alignment at OGUI01000013.1:2666594..2667484- (Aspergillus niger N402)
ACAACGAGTTCGTCCAGCTCATGATGCAAAAATAAAATTCCTTACCATGA
TGGCTCGTAAGATGAAGGACACCGACTCCGAGGAGGAAATCCGCGAGGCT
TTCAAGGTCTTCGACCGCGACAACAATGGTTTTATCTCCGCCGCGGAGCT
GCGCCACGTCATGACCTCCATTGGCGAGAAGCTCACCGACGACGAAGTCG
ATGAGATGATCCGTGAGGCGGACCAGGACGGTGATGGCCGCATCGACTGC
CAGATCACCACCAAGGAGCTCGGCACTGTGATGCGCTCCCTTGGCCAGAA
CCCCTCCGAGTCTGAGCTTCAGGACATGATCAACGAGGTTGACGCTGACA
ACAACGGAACGATCGACTTCCCCGGACAAGGATGGCGATGGCCGACTCTC
TGACCGAAGAGCAAGTTTCTGAGTACAAGGAGGCCTTCTCCCTCTTTATG
ACAACGAGTTCGTCCAGCTCATGATGCAAAAATAAAATTCCTTACCATGA
TGGCTCGTAAGATGAAGGACACCGACTCCGAGGAGGAAATCCGCGAGGCT
TTCAAGGTCTTCGACCGCGACAACAATGGTTTTATCTCCGCCGCGGAGCT
GCGCCACGTCATGACCTCCATTGGCGAGAAGCTCACCGACGACGAAGTCG
ATGAGATGATCCGTGAGGCGGACCAGGACGGTGATGGCCGCATCGACTGC
CAGATCACCACCAAGGAGCTCGGCACTGTGATGCGCTCCCTTGGCCAGAA
CCCCTCCGAGTCTGAGCTTCAGGACATGATCAACGAGGTTGACGCTGACA
ACAACGGAACGATCGACTTCCCCGGACAAGGATGGCGATGGCCGACTCTC
TGACCGAAGAGCAAGTTTCTGAGTACAAGGAGGCCTTCTCCCTCTTTATG
ACAACGAGTTCGTCCAGCTCATGATGCAAAAATAAAATTCCTTACCATGA
TGGCTCGTAAGATGAAGGACACCGACTCCGAGGAGGAAATCCGCGAGGCT
TTCAAGGTCTTCGACCGCGACAACAATGGTTTTATCTCCGCCGCGGAGCT
GCGCCACGTCATGACCTCCATTGGCGAGAAGCTCACCGACGACGAAGTCG
ATGAGATGATCCGTGAGGCGGACCAGGACGGTGATGGCCGCATCGACTGC
CAGATCACCACCAAGGAGCTCGGCACTGTGATGCGCTCCCTTGGCCAGAA
CCCCTCCGAGTCTGAGCTTCAGGACATGATCAACGAGGTTGACGCTGACA
ACAACGGAACGATCGACTTCCCCGGACAAGGATGGCGATGGCCGACTCTC
TGACCGAAGAGCAAGTTTCTGAGTACAAGGAGGCCTTCTCCCTCTTTATG
ACAACGAGTTCGTCCAGCTCATGATGCAAAAATAAAATTCCTTACCATGA
TGGCTCGTAAGATGAAGGACACCGACTCCGAGGAGGAAATCCGCGAGGCT
TTCAAGGTCTTCGACCGCGACAACAATGGTTTTATCTCCGCCGCGGAGCT
GCGCCACGTCATGACCTCCATTGGCGAGAAGCTCACCGACGACGAAGTCG
ATGAGATGATCCGTGAGGCGGACCAGGACGGTGATGGCCGCATCGACTGC
CAGATCACCACCAAGGAGCTCGGCACTGTGATGCGCTCCCTTGGCCAGAA
CCCCTCCGAGTCTGAGCTTCAGGACATGATCAACGAGGTTGACGCTGACA
ACAACGGAACGATCGACTTCCCCGGACAAGGATGGCGATGGCCGACTCTC
TGACCGAAGAGCAAGTTTCTGAGTACAAGGAGGCCTTCTCCCTCTTTATG
ACAACGAGTTCGTCCAGCTCATGATGCAAAAATAAAATTCCTTACCATGA
TGGCTCGTAAGATGAAGGACACCGACTCCGAGGAGGAAATCCGCGAGGCT
TTCAAGGTCTTCGACCGCGACAACAATGGTTTTATCTCCGCCGCGGAGCT
GCGCCACGTCATGACCTCCATTGGCGAGAAGCTCACCGACGACGAAGTCG
ATGAGATGATCCGTGAGGCGGACCAGGACGGTGATGGCCGCATCGACTGC
CAGATCACCACCAAGGAGCTCGGCACTGTGATGCGCTCCCTTGGCCAGAA
CCCCTCCGAGTCTGAGCTTCAGGACATGATCAACGAGGTTGACGCTGACA
ACAACGGAACGATCGACTTCCCCGGACAAGGATGGCGATGGCCGACTCTC
TGACCGAAGAGCAAGTTTCTGAGTACAAGGAGGCCTTCTCCCTCTTTATG
ACAACGAGTTCGTCCAGCTCATGATGCAAAAATAAAATTCCTTACCATGA
TGGCTCGTAAGATGAAGGACACCGACTCCGAGGAGGAAATCCGCGAGGCT
TTCAAGGTCTTCGACCGCGACAACAATGGTTTTATCTCCGCCGCGGAGCT
GCGCCACGTCATGACCTCCATTGGCGAGAAGCTCACCGACGACGAAGTCG
ATGAGATGATCCGTGAGGCGGACCAGGACGGTGATGGCCGCATCGACTGC
CAGATCACCACCAAGGAGCTCGGCACTGTGATGCGCTCCCTTGGCCAGAA
CCCCTCCGAGTCTGAGCTTCAGGACATGATCAACGAGGTTGACGCTGACA
ACAACGGAACGATCGACTTCCCCGGACAAGGATGGCGATGGCCGACTCTC
TGACCGAAGAGCAAGTTTCTGAGTACAAGGAGGCCTTCTCCCTCTTTATG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAM1ATCC64974_81790Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_81790-T1ATCC64974_81790-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_81790-T1.cdsATCC64974_81790-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_81790-T1.exon6ATCC64974_81790-T1.exon6Aspergillus niger N402exon
ATCC64974_81790-T1.exon5ATCC64974_81790-T1.exon5Aspergillus niger N402exon
ATCC64974_81790-T1.exon4ATCC64974_81790-T1.exon4Aspergillus niger N402exon
ATCC64974_81790-T1.exon3ATCC64974_81790-T1.exon3Aspergillus niger N402exon
ATCC64974_81790-T1.exon2ATCC64974_81790-T1.exon2Aspergillus niger N402exon
ATCC64974_81790-T1.exon1ATCC64974_81790-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR011992
DBxrefInterPro:IPR018247
DBxrefInterPro:IPR002048
DBxrefPFAM:PF08726
DBxrefPFAM:PF14658
DBxrefPFAM:PF13833
DBxrefPFAM:PF13499
DBxrefPFAM:PF13405
DBxrefPFAM:PF13202
DBxrefPFAM:PF00036
Producttranslation elongation factor EF1B gamma
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:2666594..2667484 -
Powered by Drupal