You are here

Home

ATCC64974_81810-T1, ATCC64974_81810-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_81810-T1
Unique NameATCC64974_81810-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:2670948..2672409-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_81810-T1 ID=ATCC64974_81810-T1|Name=ATCC64974_81810-T1|organism=Aspergillus niger N402|type=mRNA|length=1462bp|location=Sequence derived from alignment at OGUI01000013.1:2670948..2672409- (Aspergillus niger N402)
ATGGCATATACAGATGATGCTGTGAAAGCGAAGCTTTCAGCGCTCAACGA
AACCCAGGAAGGCATTGTCACAGTTGCGCAATGGGTTATGTTTCACAGGT
AAGATGACAACTGTTCGTATATCCAAGGGCTCTACTCATATGTATTTTCA
ACATTAGACGGCACGCCGAACGGACAGCACAGCTCTGGCTGCAGAAACTC
CGCGATTCCCCAGCACCGAAACGTCTGAACCTGATATATTTGGCCAATGG
TATAGCTCATCGTTCCAGGTCGGTTGCGGACCAACACTAACAGCATGTCA
GAGGTCGCGCAACAGTCAAGAGCCCGACGGAAAGAGGACTTTCTCATCGC
ATTCTCGCCGGTTAGTGTATCATTATTGGCCCTGGCAGGTATCAGGAGTT
AACATTTACCAGATCATCGCAGAGGCCACGGCTATCGCATACAAGGGTTC
CTCAAACGATATTCAGCAAAAGCTTCGTCGCGTGGTTGAAGTATGGAGAC
AGAGATCAATCTTTGAACTTCCCATTCAGGAGGCCGTAGAAGCTCGAGTA
GATGGTAGGTCGCCTTGCGTTGTTCTTTTCATTCATCCTGCTTACTCCGC
CGTAGAGATCGATAAGTCACGCTCTACCGGTAAAAAACCGTTGCTAGGAG
GGTCTCTCTTTTCAAGCTCGTCGGGTTCAACACCGTCTGAGCTTCAGCCT
CTAGTGCCTCTACAAGTAGCCGTTTCAAAGGCTACAGTGGCTTCGACTGC
GTCTGCCACAGCTGCGAATGCAGAGTATGATAAGATGCATGACCCTAGCA
CGCCTTTGCCTACACCTCCAGTGCATGCGGCGCGGCTTAGCCAGTTGTTG
AAAGCCCTTGCGAATGCAGAAAGCTCTGTATCCGAGGTGATCAAATCACG
CATTGCACTCATTGAGGGTCTCGAGAAGCTTCTCGAAACTAATCGCTCAG
CTTTATCTAAAGAACAATCAATGGTCGCACAGTTGACGGAAAGAAAATCG
GAGACGGAAGCCACCAAACGGGAGGTTGAAGATGGGATTATGCGAGGGCT
TTCTGCCGAGAATTCGCCTGCGGTCAACCATGGCGATGCTGGGCCAGAGG
GAGAACCTATCTCTCGTCCAGAAGTTGAGGCCCTGACTCCTCCGCCAGTT
GAGGCTATTACGCCTGTTGGTTCTCCCAAGCAGGCCGCACAGGAATCAGA
CTTCAGCGCAGTGCCCCCTCAACCCCAGATACTAGGTGGATTTACCCTGC
CTGGATTCGGAAATCCGGCCGATTCATCTCTTTCGGCGGCGGGCTTCCCT
CCTGTGGGACTCGGCGAGCACCAAACGGACGGTTCAAACGGGCTCCATGC
CAAGAGGCGCAAGGTTACGCACGAAGAGGAGGATTATGCTCAGTTCGCAG
GCGGCGACTTGGATGCTGATGTAGCTGAGCTCTTGAAACAGGAAGGCGAT
GCCCAGCAATGA
back to top

Coding sequence (CDS) from alignment at OGUI01000013.1:2670948..2672409-

>ATCC64974_81810-T1 ID=ATCC64974_81810-T1|Name=ATCC64974_81810-T1|organism=Aspergillus niger N402|type=CDS|length=6240bp|location=Sequence derived from alignment at OGUI01000013.1:2670948..2672409- (Aspergillus niger N402)
AGATCGATAAGTCACGCTCTACCGGTAAAAAACCGTTGCTAGGAGGGTCT
CTCTTTTCAAGCTCGTCGGGTTCAACACCGTCTGAGCTTCAGCCTCTAGT
GCCTCTACAAGTAGCCGTTTCAAAGGCTACAGTGGCTTCGACTGCGTCTG
CCACAGCTGCGAATGCAGAGTATGATAAGATGCATGACCCTAGCACGCCT
TTGCCTACACCTCCAGTGCATGCGGCGCGGCTTAGCCAGTTGTTGAAAGC
CCTTGCGAATGCAGAAAGCTCTGTATCCGAGGTGATCAAATCACGCATTG
CACTCATTGAGGGTCTCGAGAAGCTTCTCGAAACTAATCGCTCAGCTTTA
TCTAAAGAACAATCAATGGTCGCACAGTTGACGGAAAGAAAATCGGAGAC
GGAAGCCACCAAACGGGAGGTTGAAGATGGGATTATGCGAGGGCTTTCTG
CCGAGAATTCGCCTGCGGTCAACCATGGCGATGCTGGGCCAGAGGGAGAA
CCTATCTCTCGTCCAGAAGTTGAGGCCCTGACTCCTCCGCCAGTTGAGGC
TATTACGCCTGTTGGTTCTCCCAAGCAGGCCGCACAGGAATCAGACTTCA
GCGCAGTGCCCCCTCAACCCCAGATACTAGGTGGATTTACCCTGCCTGGA
TTCGGAAATCCGGCCGATTCATCTCTTTCGGCGGCGGGCTTCCCTCCTGT
GGGACTCGGCGAGCACCAAACGGACGGTTCAAACGGGCTCCATGCCAAGA
GGCGCAAGGTTACGCACGAAGAGGAGGATTATGCTCAGTTCGCAGGCGGC
GACTTGGATGCTGATGTAGCTGAGCTCTTGAAACAGGAAGGCGATGCCCA
GCAATGAATCATCGCAGAGGCCACGGCTATCGCATACAAGGGTTCCTCAA
ACGATATTCAGCAAAAGCTTCGTCGCGTGGTTGAAGTATGGAGACAGAGA
TCAATCTTTGAACTTCCCATTCAGGAGGCCGTAGAAGCTCGAGTAGATGA
GGTCGCGCAACAGTCAAGAGCCCGACGGAAAGAGGACTTTCTCATCGCAT
TCTCGCCGACGGCACGCCGAACGGACAGCACAGCTCTGGCTGCAGAAACT
CCGCGATTCCCCAGCACCGAAACGTCTGAACCTGATATATTTGGCCAATG
ATGGCATATACAGATGATGCTGTGAAAGCGAAGCTTTCAGCGCTCAACGA
AACCCAGGAAGGCATTGTCACAGTTGCGCAATGGGTTATGTTTCACAGAG
ATCGATAAGTCACGCTCTACCGGTAAAAAACCGTTGCTAGGAGGGTCTCT
CTTTTCAAGCTCGTCGGGTTCAACACCGTCTGAGCTTCAGCCTCTAGTGC
CTCTACAAGTAGCCGTTTCAAAGGCTACAGTGGCTTCGACTGCGTCTGCC
ACAGCTGCGAATGCAGAGTATGATAAGATGCATGACCCTAGCACGCCTTT
GCCTACACCTCCAGTGCATGCGGCGCGGCTTAGCCAGTTGTTGAAAGCCC
TTGCGAATGCAGAAAGCTCTGTATCCGAGGTGATCAAATCACGCATTGCA
CTCATTGAGGGTCTCGAGAAGCTTCTCGAAACTAATCGCTCAGCTTTATC
TAAAGAACAATCAATGGTCGCACAGTTGACGGAAAGAAAATCGGAGACGG
AAGCCACCAAACGGGAGGTTGAAGATGGGATTATGCGAGGGCTTTCTGCC
GAGAATTCGCCTGCGGTCAACCATGGCGATGCTGGGCCAGAGGGAGAACC
TATCTCTCGTCCAGAAGTTGAGGCCCTGACTCCTCCGCCAGTTGAGGCTA
TTACGCCTGTTGGTTCTCCCAAGCAGGCCGCACAGGAATCAGACTTCAGC
GCAGTGCCCCCTCAACCCCAGATACTAGGTGGATTTACCCTGCCTGGATT
CGGAAATCCGGCCGATTCATCTCTTTCGGCGGCGGGCTTCCCTCCTGTGG
GACTCGGCGAGCACCAAACGGACGGTTCAAACGGGCTCCATGCCAAGAGG
CGCAAGGTTACGCACGAAGAGGAGGATTATGCTCAGTTCGCAGGCGGCGA
CTTGGATGCTGATGTAGCTGAGCTCTTGAAACAGGAAGGCGATGCCCAGC
AATGAATCATCGCAGAGGCCACGGCTATCGCATACAAGGGTTCCTCAAAC
GATATTCAGCAAAAGCTTCGTCGCGTGGTTGAAGTATGGAGACAGAGATC
AATCTTTGAACTTCCCATTCAGGAGGCCGTAGAAGCTCGAGTAGATGAGG
TCGCGCAACAGTCAAGAGCCCGACGGAAAGAGGACTTTCTCATCGCATTC
TCGCCGACGGCACGCCGAACGGACAGCACAGCTCTGGCTGCAGAAACTCC
GCGATTCCCCAGCACCGAAACGTCTGAACCTGATATATTTGGCCAATGAT
GGCATATACAGATGATGCTGTGAAAGCGAAGCTTTCAGCGCTCAACGAAA
CCCAGGAAGGCATTGTCACAGTTGCGCAATGGGTTATGTTTCACAGAGAT
CGATAAGTCACGCTCTACCGGTAAAAAACCGTTGCTAGGAGGGTCTCTCT
TTTCAAGCTCGTCGGGTTCAACACCGTCTGAGCTTCAGCCTCTAGTGCCT
CTACAAGTAGCCGTTTCAAAGGCTACAGTGGCTTCGACTGCGTCTGCCAC
AGCTGCGAATGCAGAGTATGATAAGATGCATGACCCTAGCACGCCTTTGC
CTACACCTCCAGTGCATGCGGCGCGGCTTAGCCAGTTGTTGAAAGCCCTT
GCGAATGCAGAAAGCTCTGTATCCGAGGTGATCAAATCACGCATTGCACT
CATTGAGGGTCTCGAGAAGCTTCTCGAAACTAATCGCTCAGCTTTATCTA
AAGAACAATCAATGGTCGCACAGTTGACGGAAAGAAAATCGGAGACGGAA
GCCACCAAACGGGAGGTTGAAGATGGGATTATGCGAGGGCTTTCTGCCGA
GAATTCGCCTGCGGTCAACCATGGCGATGCTGGGCCAGAGGGAGAACCTA
TCTCTCGTCCAGAAGTTGAGGCCCTGACTCCTCCGCCAGTTGAGGCTATT
ACGCCTGTTGGTTCTCCCAAGCAGGCCGCACAGGAATCAGACTTCAGCGC
AGTGCCCCCTCAACCCCAGATACTAGGTGGATTTACCCTGCCTGGATTCG
GAAATCCGGCCGATTCATCTCTTTCGGCGGCGGGCTTCCCTCCTGTGGGA
CTCGGCGAGCACCAAACGGACGGTTCAAACGGGCTCCATGCCAAGAGGCG
CAAGGTTACGCACGAAGAGGAGGATTATGCTCAGTTCGCAGGCGGCGACT
TGGATGCTGATGTAGCTGAGCTCTTGAAACAGGAAGGCGATGCCCAGCAA
TGAATCATCGCAGAGGCCACGGCTATCGCATACAAGGGTTCCTCAAACGA
TATTCAGCAAAAGCTTCGTCGCGTGGTTGAAGTATGGAGACAGAGATCAA
TCTTTGAACTTCCCATTCAGGAGGCCGTAGAAGCTCGAGTAGATGAGGTC
GCGCAACAGTCAAGAGCCCGACGGAAAGAGGACTTTCTCATCGCATTCTC
GCCGACGGCACGCCGAACGGACAGCACAGCTCTGGCTGCAGAAACTCCGC
GATTCCCCAGCACCGAAACGTCTGAACCTGATATATTTGGCCAATGATGG
CATATACAGATGATGCTGTGAAAGCGAAGCTTTCAGCGCTCAACGAAACC
CAGGAAGGCATTGTCACAGTTGCGCAATGGGTTATGTTTCACAGAGATCG
ATAAGTCACGCTCTACCGGTAAAAAACCGTTGCTAGGAGGGTCTCTCTTT
TCAAGCTCGTCGGGTTCAACACCGTCTGAGCTTCAGCCTCTAGTGCCTCT
ACAAGTAGCCGTTTCAAAGGCTACAGTGGCTTCGACTGCGTCTGCCACAG
CTGCGAATGCAGAGTATGATAAGATGCATGACCCTAGCACGCCTTTGCCT
ACACCTCCAGTGCATGCGGCGCGGCTTAGCCAGTTGTTGAAAGCCCTTGC
GAATGCAGAAAGCTCTGTATCCGAGGTGATCAAATCACGCATTGCACTCA
TTGAGGGTCTCGAGAAGCTTCTCGAAACTAATCGCTCAGCTTTATCTAAA
GAACAATCAATGGTCGCACAGTTGACGGAAAGAAAATCGGAGACGGAAGC
CACCAAACGGGAGGTTGAAGATGGGATTATGCGAGGGCTTTCTGCCGAGA
ATTCGCCTGCGGTCAACCATGGCGATGCTGGGCCAGAGGGAGAACCTATC
TCTCGTCCAGAAGTTGAGGCCCTGACTCCTCCGCCAGTTGAGGCTATTAC
GCCTGTTGGTTCTCCCAAGCAGGCCGCACAGGAATCAGACTTCAGCGCAG
TGCCCCCTCAACCCCAGATACTAGGTGGATTTACCCTGCCTGGATTCGGA
AATCCGGCCGATTCATCTCTTTCGGCGGCGGGCTTCCCTCCTGTGGGACT
CGGCGAGCACCAAACGGACGGTTCAAACGGGCTCCATGCCAAGAGGCGCA
AGGTTACGCACGAAGAGGAGGATTATGCTCAGTTCGCAGGCGGCGACTTG
GATGCTGATGTAGCTGAGCTCTTGAAACAGGAAGGCGATGCCCAGCAATG
AATCATCGCAGAGGCCACGGCTATCGCATACAAGGGTTCCTCAAACGATA
TTCAGCAAAAGCTTCGTCGCGTGGTTGAAGTATGGAGACAGAGATCAATC
TTTGAACTTCCCATTCAGGAGGCCGTAGAAGCTCGAGTAGATGAGGTCGC
GCAACAGTCAAGAGCCCGACGGAAAGAGGACTTTCTCATCGCATTCTCGC
CGACGGCACGCCGAACGGACAGCACAGCTCTGGCTGCAGAAACTCCGCGA
TTCCCCAGCACCGAAACGTCTGAACCTGATATATTTGGCCAATGATGGCA
TATACAGATGATGCTGTGAAAGCGAAGCTTTCAGCGCTCAACGAAACCCA
GGAAGGCATTGTCACAGTTGCGCAATGGGTTATGTTTCACAGAGATCGAT
AAGTCACGCTCTACCGGTAAAAAACCGTTGCTAGGAGGGTCTCTCTTTTC
AAGCTCGTCGGGTTCAACACCGTCTGAGCTTCAGCCTCTAGTGCCTCTAC
AAGTAGCCGTTTCAAAGGCTACAGTGGCTTCGACTGCGTCTGCCACAGCT
GCGAATGCAGAGTATGATAAGATGCATGACCCTAGCACGCCTTTGCCTAC
ACCTCCAGTGCATGCGGCGCGGCTTAGCCAGTTGTTGAAAGCCCTTGCGA
ATGCAGAAAGCTCTGTATCCGAGGTGATCAAATCACGCATTGCACTCATT
GAGGGTCTCGAGAAGCTTCTCGAAACTAATCGCTCAGCTTTATCTAAAGA
ACAATCAATGGTCGCACAGTTGACGGAAAGAAAATCGGAGACGGAAGCCA
CCAAACGGGAGGTTGAAGATGGGATTATGCGAGGGCTTTCTGCCGAGAAT
TCGCCTGCGGTCAACCATGGCGATGCTGGGCCAGAGGGAGAACCTATCTC
TCGTCCAGAAGTTGAGGCCCTGACTCCTCCGCCAGTTGAGGCTATTACGC
CTGTTGGTTCTCCCAAGCAGGCCGCACAGGAATCAGACTTCAGCGCAGTG
CCCCCTCAACCCCAGATACTAGGTGGATTTACCCTGCCTGGATTCGGAAA
TCCGGCCGATTCATCTCTTTCGGCGGCGGGCTTCCCTCCTGTGGGACTCG
GCGAGCACCAAACGGACGGTTCAAACGGGCTCCATGCCAAGAGGCGCAAG
GTTACGCACGAAGAGGAGGATTATGCTCAGTTCGCAGGCGGCGACTTGGA
TGCTGATGTAGCTGAGCTCTTGAAACAGGAAGGCGATGCCCAGCAATGAA
TCATCGCAGAGGCCACGGCTATCGCATACAAGGGTTCCTCAAACGATATT
CAGCAAAAGCTTCGTCGCGTGGTTGAAGTATGGAGACAGAGATCAATCTT
TGAACTTCCCATTCAGGAGGCCGTAGAAGCTCGAGTAGATGAGGTCGCGC
AACAGTCAAGAGCCCGACGGAAAGAGGACTTTCTCATCGCATTCTCGCCG
ACGGCACGCCGAACGGACAGCACAGCTCTGGCTGCAGAAACTCCGCGATT
CCCCAGCACCGAAACGTCTGAACCTGATATATTTGGCCAATGATGGCATA
TACAGATGATGCTGTGAAAGCGAAGCTTTCAGCGCTCAACGAAACCCAGG
AAGGCATTGTCACAGTTGCGCAATGGGTTATGTTTCACAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_81810ATCC64974_81810Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_81810-T1ATCC64974_81810-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_81810-T1.cdsATCC64974_81810-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_81810-T1.exon5ATCC64974_81810-T1.exon5Aspergillus niger N402exon
ATCC64974_81810-T1.exon4ATCC64974_81810-T1.exon4Aspergillus niger N402exon
ATCC64974_81810-T1.exon3ATCC64974_81810-T1.exon3Aspergillus niger N402exon
ATCC64974_81810-T1.exon2ATCC64974_81810-T1.exon2Aspergillus niger N402exon
ATCC64974_81810-T1.exon1ATCC64974_81810-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR006903
DBxrefInterPro:IPR008942
DBxrefInterPro:IPR006569
DBxrefPFAM:PF04818
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:2670948..2672409 -
Powered by Drupal