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ATCC64974_8190-T1, ATCC64974_8190-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_8190-T1
Unique NameATCC64974_8190-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000002.1:245577..247055+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_8190-T1 ID=ATCC64974_8190-T1|Name=ATCC64974_8190-T1|organism=Aspergillus niger N402|type=mRNA|length=1479bp|location=Sequence derived from alignment at OGUI01000002.1:245577..247055+ (Aspergillus niger N402)
ATGGCTTCCAATACAATTCCTAGTCCTGCTTCGGAGACTGTTGCTCCTGG
CAAATCCGACTTTTCTCAGAAAAACAATGCCTCCCCAGCTCGTCGTTCGC
GGCCTCCAAGGCCCAATTACCGACACATCCATCGCTTCCCCTTCCCGGTC
GAGGTGCATCCTCTCCCTCCTCTCATCCCCCATAACCCTCTCTCGCTCGT
CAGTGTGCTGCTGTCCTACCTGACGTACTTTATTTCTCCCCCTCATCAGG
AAGTCTACTCCGCCTACTTTGACTCGGCCACATCCTCGGTTCATGTCACA
GACCCTAAGGCTATAAAAGCCCTCTGGGAGATGGGTTTCTTTGGTAAGGG
AACCCTGAGTCGAAGTGAGCCGAGCTGGCTTGAGCGTGAGAAGAAGAGAC
GAGGATTACTTGGGGGGATGACTAGCGAAGAGGTCACACGACAGCGGCGG
ACGGAACGTCGCGAGTTGAAACTGGAGCGCGCGAGGATGGAAAAGCTTGC
CATTGAGGAGAGACTCAAGGCCGAAGCGGCTGCCAGGGAAGGCACTGCGA
CGCCAAACGAACAGTCATCCCTCTCACCCACTCCGAATGGTGTCTCTGAA
GGCACAGTACCAATTACGGAGAAGTTCTCCCTGAGAAAAGCACGGGAAGC
CAGGGAAGCCAAGCTCCTTGAGTCACAACGTCCAGTATCACAAGACGGCA
ATACACGCACCCCTAACTCCGCCGGAAAGCGGTCACCTAGTGGCAGCAAA
ACTGTGCGGTTTTCTCCGGTTGTTCAAGCCAAGGAGTTCGCTTCTGATTC
GGCTATCTTGAGCTTGCCAGAAATGTCTGCAGATAGAAATACGGACGGAG
GTAAGGCGAATGATGAGCCAGAATTAAGTAATGAAGAGCACCTTCAATTA
TCTAACGAAGAGGCCTTCTTCCTTGCATATGGGCTGGGAGTCTTGCGTGT
GCGCGATGATACTCGCACATCCGAGATTCCTACATCTTCCCTGTTGCCAT
TATTATGTCAACACTCTTACTTCCCTCCTGGAGCTCCGTCAGCGGATCCC
ACGCCGGACGACCCATTCATGATATCCTATGTTGTGTACCACCATTTCCG
GTCTTTGGGGTGGGTTGTGCGCTCCGGAGTGAAATTCGGTGTGGACTATA
TCCTCTACAACCGTGGGCCGGTCTTCTCACATGCTGAGTTTGCTGTCGTG
GTTGTCCCGTCCTATGGTCATGGCTACTGGTCTGAAACGGCCGAGCGCAA
GGCCCAGTGTGAGGAGAAGATGGCGCGCAGTTGGTGGTGGCTGCATTGTG
TCAATCGAGTCCAGGCCCAGGTGAAGAAGAGCTTGGTAGTATGCTATGTG
GAAGTGCCTCCGCCAACGTCCTACGAGCTTGACACTCCCTCGGAAGAGGA
TATTGGTGCAATGTTGGCTCGTTATCAAGTCCGGGAGATGGTTATTCGAA
GATGGGTCCCCAATCGGACTCGGGACTAA
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Coding sequence (CDS) from alignment at OGUI01000002.1:245577..247055+

>ATCC64974_8190-T1 ID=ATCC64974_8190-T1|Name=ATCC64974_8190-T1|organism=Aspergillus niger N402|type=CDS|length=1479bp|location=Sequence derived from alignment at OGUI01000002.1:245577..247055+ (Aspergillus niger N402)
ATGGCTTCCAATACAATTCCTAGTCCTGCTTCGGAGACTGTTGCTCCTGG
CAAATCCGACTTTTCTCAGAAAAACAATGCCTCCCCAGCTCGTCGTTCGC
GGCCTCCAAGGCCCAATTACCGACACATCCATCGCTTCCCCTTCCCGGTC
GAGGTGCATCCTCTCCCTCCTCTCATCCCCCATAACCCTCTCTCGCTCGT
CAGTGTGCTGCTGTCCTACCTGACGTACTTTATTTCTCCCCCTCATCAGG
AAGTCTACTCCGCCTACTTTGACTCGGCCACATCCTCGGTTCATGTCACA
GACCCTAAGGCTATAAAAGCCCTCTGGGAGATGGGTTTCTTTGGTAAGGG
AACCCTGAGTCGAAGTGAGCCGAGCTGGCTTGAGCGTGAGAAGAAGAGAC
GAGGATTACTTGGGGGGATGACTAGCGAAGAGGTCACACGACAGCGGCGG
ACGGAACGTCGCGAGTTGAAACTGGAGCGCGCGAGGATGGAAAAGCTTGC
CATTGAGGAGAGACTCAAGGCCGAAGCGGCTGCCAGGGAAGGCACTGCGA
CGCCAAACGAACAGTCATCCCTCTCACCCACTCCGAATGGTGTCTCTGAA
GGCACAGTACCAATTACGGAGAAGTTCTCCCTGAGAAAAGCACGGGAAGC
CAGGGAAGCCAAGCTCCTTGAGTCACAACGTCCAGTATCACAAGACGGCA
ATACACGCACCCCTAACTCCGCCGGAAAGCGGTCACCTAGTGGCAGCAAA
ACTGTGCGGTTTTCTCCGGTTGTTCAAGCCAAGGAGTTCGCTTCTGATTC
GGCTATCTTGAGCTTGCCAGAAATGTCTGCAGATAGAAATACGGACGGAG
GTAAGGCGAATGATGAGCCAGAATTAAGTAATGAAGAGCACCTTCAATTA
TCTAACGAAGAGGCCTTCTTCCTTGCATATGGGCTGGGAGTCTTGCGTGT
GCGCGATGATACTCGCACATCCGAGATTCCTACATCTTCCCTGTTGCCAT
TATTATGTCAACACTCTTACTTCCCTCCTGGAGCTCCGTCAGCGGATCCC
ACGCCGGACGACCCATTCATGATATCCTATGTTGTGTACCACCATTTCCG
GTCTTTGGGGTGGGTTGTGCGCTCCGGAGTGAAATTCGGTGTGGACTATA
TCCTCTACAACCGTGGGCCGGTCTTCTCACATGCTGAGTTTGCTGTCGTG
GTTGTCCCGTCCTATGGTCATGGCTACTGGTCTGAAACGGCCGAGCGCAA
GGCCCAGTGTGAGGAGAAGATGGCGCGCAGTTGGTGGTGGCTGCATTGTG
TCAATCGAGTCCAGGCCCAGGTGAAGAAGAGCTTGGTAGTATGCTATGTG
GAAGTGCCTCCGCCAACGTCCTACGAGCTTGACACTCCCTCGGAAGAGGA
TATTGGTGCAATGTTGGCTCGTTATCAAGTCCGGGAGATGGTTATTCGAA
GATGGGTCCCCAATCGGACTCGGGACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000214tRNA-intron endonuclease complex
Vocabulary: Biological Process
TermDefinition
GO:0006388tRNA splicing, via endonucleolytic cleavage and ligation
Vocabulary: Molecular Function
TermDefinition
GO:0000213tRNA-intron endonuclease activity
GO:0003676nucleic acid binding
GO:0004518nuclease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_8190ATCC64974_8190Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_8190-T1.exon1ATCC64974_8190-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_8190-T1.cdsATCC64974_8190-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_8190-T1ATCC64974_8190-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262WXK
DBxrefInterPro:IPR036167
DBxrefInterPro:IPR006677
DBxrefInterPro:IPR016589
DBxrefInterPro:IPR011856
DBxrefPFAM:PF01974
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000002.1supercontigOGUI01000002.1:245577..247055 +
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