You are here

Home

ATCC64974_8230-T1, ATCC64974_8230-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_8230-T1
Unique NameATCC64974_8230-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000002.1:254908..256571+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_8230-T1 ID=ATCC64974_8230-T1|Name=ATCC64974_8230-T1|organism=Aspergillus niger N402|type=mRNA|length=1664bp|location=Sequence derived from alignment at OGUI01000002.1:254908..256571+ (Aspergillus niger N402)
ATGTGGAGTGCGCTCCGAACACCACCGGCGCAGTGCCTTCGAGCTCCCGG
TCGAGCTCTCGCCAGCTCACTTCGCGGCCGACCCAACCCCCGAGGCCCCC
GAAACTCCATACGCAGGCCAGAGCCCATCAGAAGAGACGTCCCAGCGTCG
CGAGCGCCTGAACCCAGCAATACAGAGACATCTCCCGAAAATCCCACGCC
TCAATATGACCCCTCCCAGAACACCCTACTCGCCCCAGTTCACATCCCCG
AAGACCCTCATGGCGTGATAAAAGAGACGCACCCGGCGACGGGTATCCTC
GCCAACTCAGGTCTGGTGGTGCAGCGGCAGTTGGAGCTCATGAATGTGAT
GATTGGATTCGAACAAGCCAACAAATACGTCATTATGGATGCCAACGGCA
ACCATATTGGCTATATGGCGGAGCAGGAGAAAGGCATGGTGAACATGATG
GCGCGACAATCGTTCCGAACGCATCGAAGCTTCGTGACGCATGTGTTTGA
CAAGCATGAGAATGAAGTGCTTCGGGTAGGTATCGATCTGCCAGTTACTT
GTGGATGATGCTGACTGCGTAGTTCCACCGTCCGTTCTCGTGGATCAACT
CCCGTATCCGCGTATATGATCCTCTCGACCTGGCAAAGGGTGCCTATTCC
TCGTCCACTGCACTACAGGCAACCTCAGCCGGATCTCTGGTCCAGCCTAC
AGGGGACTCGAATGCTCGGGTTTCATCCTTGGGCTTGGATGAAATGCGGG
TTATCGGAGAGGCTCAGCAACAATGGGCTCCACTACGGCGGAAATACAAC
CTCTTCACGTATCACCACTCGCCAAATCCAGCGACAGAGATGAAAACAGA
GAAGCTACCGCTTAACCAGATGGATTTGTCTAATAAGCAGCAAATGCAGC
TGGTCCAATCATCTCAGAGTGGCCAAGAAACGGGCGAATATCACCAATTC
GCCTACGTGGACGAGCCTTTCTTGTCGTGGGATTTTGGTCTACGCTCGGC
TGACAAACAGCTGATCGGCTCTGTGAATCGCAACTTTGCCGGGTTTGCCC
GGGAAATCTTCACGGATACGGGTGTCTATGCTCTGCGAATGGACTCTGCT
TCTCCCAGCGAAGAGTTCCTCGACAAGAACCGTGCGGCTACTGGGATGAC
ATTCGACCAGCGTGCCGTGATGCTGGCAACCGCTGTGAGCATTGACTTTG
ACTACTTTAGTCGCCATAGCAACTCGGGTGGATTTGGTTTCATGCCTCTC
TGGATCCCTGGATTTGGTGGTGAGGCAGCTGCTGGGGGTGCTGCCGGGGG
CGCAGCAGCCGGTGAAGCAGGTGCCGTGGGGGAAGCGGCCGCGGGAACTC
TTGGTCGGGCTGGGGCAGCCGGTGGAATGGCTGATGGCGCTGCAGCAGGT
GCAGCAGGTGCGGGCGCAATGGCTGGCTACGAAGCCATGTCCCGTGGGAT
GGGAGGCAGCCAGCCTGCTCCCGATCAGCAAGCGGCACCTGTAGACCAAC
AGCCACCGACGCCAGGTCAAACGGGTCCGTATGGAGATGTCTGGGGGGAA
GAGTCCGAGAACCCATGGGGAAAGGAGCCTGAGAACACATGGGGCCAGGA
AGAGGATCCGTGGGCAGATGAAGCCGACGAGGGCGAGGGAGGCGATGATT
TCGATTGGTTTTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000002.1:254908..256571+

>ATCC64974_8230-T1 ID=ATCC64974_8230-T1|Name=ATCC64974_8230-T1|organism=Aspergillus niger N402|type=CDS|length=3234bp|location=Sequence derived from alignment at OGUI01000002.1:254908..256571+ (Aspergillus niger N402)
ATGTGGAGTGCGCTCCGAACACCACCGGCGCAGTGCCTTCGAGCTCCCGG
TCGAGCTCTCGCCAGCTCACTTCGCGGCCGACCCAACCCCCGAGGCCCCC
GAAACTCCATACGCAGGCCAGAGCCCATCAGAAGAGACGTCCCAGCGTCG
CGAGCGCCTGAACCCAGCAATACAGAGACATCTCCCGAAAATCCCACGCC
TCAATATGACCCCTCCCAGAACACCCTACTCGCCCCAGTTCACATCCCCG
AAGACCCTCATGGCGTGATAAAAGAGACGCACCCGGCGACGGGTATCCTC
GCCAACTCAGGTCTGGTGGTGCAGCGGCAGTTGGAGCTCATGAATGTGAT
GATTGGATTCGAACAAGCCAACAAATACGTCATTATGGATGCCAACGGCA
ACCATATTGGCTATATGGCGGAGCAGGAGAAAGGCATGGTGAACATGATG
GCGCGACAATCGTTCCGAACGCATCGAAGCTTCGTGACGCATGTGTTTGA
CAAGCATGAGAATGAAGTGCTTCGGTTCCACCGTCCGTTCTCGTGGATCA
ACTCCCGTATCCGCGTATATGATCCTCTCGACCTGGCAAAGGGTGCCTAT
TCCTCGTCCACTGCACTACAGGCAACCTCAGCCGGATCTCTGGTCCAGCC
TACAGGGGACTCGAATGCTCGGGTTTCATCCTTGGGCTTGGATGAAATGC
GGGTTATCGGAGAGGCTCAGCAACAATGGGCTCCACTACGGCGGAAATAC
AACCTCTTCACGTATCACCACTCGCCAAATCCAGCGACAGAGATGAAAAC
AGAGAAGCTACCGCTTAACCAGATGGATTTGTCTAATAAGCAGCAAATGC
AGCTGGTCCAATCATCTCAGAGTGGCCAAGAAACGGGCGAATATCACCAA
TTCGCCTACGTGGACGAGCCTTTCTTGTCGTGGGATTTTGGTCTACGCTC
GGCTGACAAACAGCTGATCGGCTCTGTGAATCGCAACTTTGCCGGGTTTG
CCCGGGAAATCTTCACGGATACGGGTGTCTATGCTCTGCGAATGGACTCT
GCTTCTCCCAGCGAAGAGTTCCTCGACAAGAACCGTGCGGCTACTGGGAT
GACATTCGACCAGCGTGCCGTGATGCTGGCAACCGCTGTGAGCATTGACT
TTGACTACTTTAGTCGCCATAGCAACTCGGGTGGATTTGGTTTCATGCCT
CTCTGGATCCCTGGATTTGGTGGTGAGGCAGCTGCTGGGGGTGCTGCCGG
GGGCGCAGCAGCCGGTGAAGCAGGTGCCGTGGGGGAAGCGGCCGCGGGAA
CTCTTGGTCGGGCTGGGGCAGCCGGTGGAATGGCTGATGGCGCTGCAGCA
GGTGCAGCAGGTGCGGGCGCAATGGCTGGCTACGAAGCCATGTCCCGTGG
GATGGGAGGCAGCCAGCCTGCTCCCGATCAGCAAGCGGCACCTGTAGACC
AACAGCCACCGACGCCAGGTCAAACGGGTCCGTATGGAGATGTCTGGGGG
GAAGAGTCCGAGAACCCATGGGGAAAGGAGCCTGAGAACACATGGGGCCA
GGAAGAGGATCCGTGGGCAGATGAAGCCGACGAGGGCGAGGGAGGCGATG
ATTTCGATTGGTTTTAAATGTGGAGTGCGCTCCGAACACCACCGGCGCAG
TGCCTTCGAGCTCCCGGTCGAGCTCTCGCCAGCTCACTTCGCGGCCGACC
CAACCCCCGAGGCCCCCGAAACTCCATACGCAGGCCAGAGCCCATCAGAA
GAGACGTCCCAGCGTCGCGAGCGCCTGAACCCAGCAATACAGAGACATCT
CCCGAAAATCCCACGCCTCAATATGACCCCTCCCAGAACACCCTACTCGC
CCCAGTTCACATCCCCGAAGACCCTCATGGCGTGATAAAAGAGACGCACC
CGGCGACGGGTATCCTCGCCAACTCAGGTCTGGTGGTGCAGCGGCAGTTG
GAGCTCATGAATGTGATGATTGGATTCGAACAAGCCAACAAATACGTCAT
TATGGATGCCAACGGCAACCATATTGGCTATATGGCGGAGCAGGAGAAAG
GCATGGTGAACATGATGGCGCGACAATCGTTCCGAACGCATCGAAGCTTC
GTGACGCATGTGTTTGACAAGCATGAGAATGAAGTGCTTCGGTTCCACCG
TCCGTTCTCGTGGATCAACTCCCGTATCCGCGTATATGATCCTCTCGACC
TGGCAAAGGGTGCCTATTCCTCGTCCACTGCACTACAGGCAACCTCAGCC
GGATCTCTGGTCCAGCCTACAGGGGACTCGAATGCTCGGGTTTCATCCTT
GGGCTTGGATGAAATGCGGGTTATCGGAGAGGCTCAGCAACAATGGGCTC
CACTACGGCGGAAATACAACCTCTTCACGTATCACCACTCGCCAAATCCA
GCGACAGAGATGAAAACAGAGAAGCTACCGCTTAACCAGATGGATTTGTC
TAATAAGCAGCAAATGCAGCTGGTCCAATCATCTCAGAGTGGCCAAGAAA
CGGGCGAATATCACCAATTCGCCTACGTGGACGAGCCTTTCTTGTCGTGG
GATTTTGGTCTACGCTCGGCTGACAAACAGCTGATCGGCTCTGTGAATCG
CAACTTTGCCGGGTTTGCCCGGGAAATCTTCACGGATACGGGTGTCTATG
CTCTGCGAATGGACTCTGCTTCTCCCAGCGAAGAGTTCCTCGACAAGAAC
CGTGCGGCTACTGGGATGACATTCGACCAGCGTGCCGTGATGCTGGCAAC
CGCTGTGAGCATTGACTTTGACTACTTTAGTCGCCATAGCAACTCGGGTG
GATTTGGTTTCATGCCTCTCTGGATCCCTGGATTTGGTGGTGAGGCAGCT
GCTGGGGGTGCTGCCGGGGGCGCAGCAGCCGGTGAAGCAGGTGCCGTGGG
GGAAGCGGCCGCGGGAACTCTTGGTCGGGCTGGGGCAGCCGGTGGAATGG
CTGATGGCGCTGCAGCAGGTGCAGCAGGTGCGGGCGCAATGGCTGGCTAC
GAAGCCATGTCCCGTGGGATGGGAGGCAGCCAGCCTGCTCCCGATCAGCA
AGCGGCACCTGTAGACCAACAGCCACCGACGCCAGGTCAAACGGGTCCGT
ATGGAGATGTCTGGGGGGAAGAGTCCGAGAACCCATGGGGAAAGGAGCCT
GAGAACACATGGGGCCAGGAAGAGGATCCGTGGGCAGATGAAGCCGACGA
GGGCGAGGGAGGCGATGATTTCGATTGGTTTTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0017121plasma membrane phospholipid scrambling
Vocabulary: Molecular Function
TermDefinition
GO:0017128phospholipid scramblase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_8230ATCC64974_8230Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_8230-T1.exon1ATCC64974_8230-T1.exon1Aspergillus niger N402exon
ATCC64974_8230-T1.exon2ATCC64974_8230-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_8230-T1.cdsATCC64974_8230-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_8230-T1ATCC64974_8230-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000021.2
NoteEggNog:ENOG41
DBxrefInterPro:IPR005552
DBxrefPFAM:PF03803
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000002.1supercontigOGUI01000002.1:254908..256571 +
Powered by Drupal