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ATCC64974_82880-T1, ATCC64974_82880-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_82880-T1
Unique NameATCC64974_82880-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000014.1:156553..158081-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_82880-T1 ID=ATCC64974_82880-T1|Name=ATCC64974_82880-T1|organism=Aspergillus niger N402|type=mRNA|length=1529bp|location=Sequence derived from alignment at OGUI01000014.1:156553..158081- (Aspergillus niger N402)
ATGAGTTGGATGTTGTGGTATACTATAGCTGGCCTAGCATCTCTAGGCCA
TGCTTCTCTTGAGAAACGCGCCACCGATGCATCTGCGTACTGCTCCGATT
CATCGGGTACCTACAAGCTCTCGTCGATCACGGCCCCAGTTCAGGGAAGT
GGCAGCCCGGGCTCAGCATCCACCTGGAAGCTAAGTATTGACGATACATC
ATCCGGTCACAAGCAGGCAATCACTGGCTTCGGGGCTGCTGTGACCGATG
CGACCGTCACGTCTTTTAACACCTTGTCGAGCTCTACCCTCCAACAGCTC
CTCAATGAGTTGATGACTTCCGATGGAGCTAATTTCTCTCTCATGCGCCA
TACCATCGGCGCGTCTGATCTGTCCGGTGATCCGGTCTACACCTATGATG
ACAACGGAAACGAAGCAGACCCCTCACTTTCCGGCTTCGGTCTCGGCGAC
CGTGGCACTGCTATGGCGGAAATGTTGGCCACGATGAAATCGTTGCAGTC
AGACCTGAAGGTGCTTGGGTCCCCGTGGAGTGCGCCCGGATGGATGAAAT
TGAATGGCGTGATTGATGGCAACGCGACTGATAACAACCTTAACGATGGC
TACCTTACCAGTGGTGGCACGGGAAGCACCGGCTACTCCAGTGCTTTCGC
GCAGTACTTCGTGAAATACATCCAAGCGTACGAAGCATTAGGAGCTACGG
TCGATGCCATTACGATTCAGAATGAGCCGTTAAATAGTCAATCTGGATAT
CCCACCATGTATGTTTACGACTATGAGTCTGCGCAGCTGATCCAAAAATA
CATTGGACCGGCTCTTGCCGACGCTGGACTGAGCACGGAAATCTGGGCCT
TCGATCACAATACTGGCAAGTACCCCATTCTCGACAATCATTGACAACTG
CTAATAATCGACATCCAGATCACGCATCGTACCCTCAGACTGTGCTTGAT
GAAGCAAGTCAATACGTCGACACGGTAGCCTGGCACTGTTATGCAAAGGA
TGTTGACTGGACTGTTCTCAGCCAGTTCTACAGCGCCAACCCTGGGGTCA
AGCAATATATGACCGAATGCTGGACACCAGCTTCCGGATCATGGCACCAG
GCTGCTGATTTTACCATGGGCCCTCTGCAGAACTATGCGTCGGGGGTCAT
GGCGTGGACTCTGGGCACGAACACTGACGACGGTCCGCATTTGACCAGTG
GTGGATGCGACGCCTGTCAGGGCTTGGTCACCATCAACGATGATGACAGC
TATACTCTTAATACTGCCTACTACATGATGGCACAGTTTAGCAAGTTCAT
GCCTCCTGGCGCGACCGTGTTGAACGGAACGGGGAGCTATACCTACTCGG
GTGGCGATGGCGTACAGTCGGTGGCGTCCCTGAACCCTGATGGAACGCGC
ACAGTCATTATTGAGAATATATTCAGTAACGATATTTACTTGACTCTGTC
GACGGAGAGCGGAGAGGAGTGGAGTGGAAATATCCCCAGTGAATCGGTGA
CTACTTGGGTCCTTCCGGCCTTGTCTTGA
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Coding sequence (CDS) from alignment at OGUI01000014.1:156553..158081-

>ATCC64974_82880-T1 ID=ATCC64974_82880-T1|Name=ATCC64974_82880-T1|organism=Aspergillus niger N402|type=CDS|length=2952bp|location=Sequence derived from alignment at OGUI01000014.1:156553..158081- (Aspergillus niger N402)
ATCACGCATCGTACCCTCAGACTGTGCTTGATGAAGCAAGTCAATACGTC
GACACGGTAGCCTGGCACTGTTATGCAAAGGATGTTGACTGGACTGTTCT
CAGCCAGTTCTACAGCGCCAACCCTGGGGTCAAGCAATATATGACCGAAT
GCTGGACACCAGCTTCCGGATCATGGCACCAGGCTGCTGATTTTACCATG
GGCCCTCTGCAGAACTATGCGTCGGGGGTCATGGCGTGGACTCTGGGCAC
GAACACTGACGACGGTCCGCATTTGACCAGTGGTGGATGCGACGCCTGTC
AGGGCTTGGTCACCATCAACGATGATGACAGCTATACTCTTAATACTGCC
TACTACATGATGGCACAGTTTAGCAAGTTCATGCCTCCTGGCGCGACCGT
GTTGAACGGAACGGGGAGCTATACCTACTCGGGTGGCGATGGCGTACAGT
CGGTGGCGTCCCTGAACCCTGATGGAACGCGCACAGTCATTATTGAGAAT
ATATTCAGTAACGATATTTACTTGACTCTGTCGACGGAGAGCGGAGAGGA
GTGGAGTGGAAATATCCCCAGTGAATCGGTGACTACTTGGGTCCTTCCGG
CCTTGTCTTGAATGAGTTGGATGTTGTGGTATACTATAGCTGGCCTAGCA
TCTCTAGGCCATGCTTCTCTTGAGAAACGCGCCACCGATGCATCTGCGTA
CTGCTCCGATTCATCGGGTACCTACAAGCTCTCGTCGATCACGGCCCCAG
TTCAGGGAAGTGGCAGCCCGGGCTCAGCATCCACCTGGAAGCTAAGTATT
GACGATACATCATCCGGTCACAAGCAGGCAATCACTGGCTTCGGGGCTGC
TGTGACCGATGCGACCGTCACGTCTTTTAACACCTTGTCGAGCTCTACCC
TCCAACAGCTCCTCAATGAGTTGATGACTTCCGATGGAGCTAATTTCTCT
CTCATGCGCCATACCATCGGCGCGTCTGATCTGTCCGGTGATCCGGTCTA
CACCTATGATGACAACGGAAACGAAGCAGACCCCTCACTTTCCGGCTTCG
GTCTCGGCGACCGTGGCACTGCTATGGCGGAAATGTTGGCCACGATGAAA
TCGTTGCAGTCAGACCTGAAGGTGCTTGGGTCCCCGTGGAGTGCGCCCGG
ATGGATGAAATTGAATGGCGTGATTGATGGCAACGCGACTGATAACAACC
TTAACGATGGCTACCTTACCAGTGGTGGCACGGGAAGCACCGGCTACTCC
AGTGCTTTCGCGCAGTACTTCGTGAAATACATCCAAGCGTACGAAGCATT
AGGAGCTACGGTCGATGCCATTACGATTCAGAATGAGCCGTTAAATAGTC
AATCTGGATATCCCACCATGTATGTTTACGACTATGAGTCTGCGCAGCTG
ATCCAAAAATACATTGGACCGGCTCTTGCCGACGCTGGACTGAGCACGGA
AATCTGGGCCTTCGATCACAATACTGATCACGCATCGTACCCTCAGACTG
TGCTTGATGAAGCAAGTCAATACGTCGACACGGTAGCCTGGCACTGTTAT
GCAAAGGATGTTGACTGGACTGTTCTCAGCCAGTTCTACAGCGCCAACCC
TGGGGTCAAGCAATATATGACCGAATGCTGGACACCAGCTTCCGGATCAT
GGCACCAGGCTGCTGATTTTACCATGGGCCCTCTGCAGAACTATGCGTCG
GGGGTCATGGCGTGGACTCTGGGCACGAACACTGACGACGGTCCGCATTT
GACCAGTGGTGGATGCGACGCCTGTCAGGGCTTGGTCACCATCAACGATG
ATGACAGCTATACTCTTAATACTGCCTACTACATGATGGCACAGTTTAGC
AAGTTCATGCCTCCTGGCGCGACCGTGTTGAACGGAACGGGGAGCTATAC
CTACTCGGGTGGCGATGGCGTACAGTCGGTGGCGTCCCTGAACCCTGATG
GAACGCGCACAGTCATTATTGAGAATATATTCAGTAACGATATTTACTTG
ACTCTGTCGACGGAGAGCGGAGAGGAGTGGAGTGGAAATATCCCCAGTGA
ATCGGTGACTACTTGGGTCCTTCCGGCCTTGTCTTGAATGAGTTGGATGT
TGTGGTATACTATAGCTGGCCTAGCATCTCTAGGCCATGCTTCTCTTGAG
AAACGCGCCACCGATGCATCTGCGTACTGCTCCGATTCATCGGGTACCTA
CAAGCTCTCGTCGATCACGGCCCCAGTTCAGGGAAGTGGCAGCCCGGGCT
CAGCATCCACCTGGAAGCTAAGTATTGACGATACATCATCCGGTCACAAG
CAGGCAATCACTGGCTTCGGGGCTGCTGTGACCGATGCGACCGTCACGTC
TTTTAACACCTTGTCGAGCTCTACCCTCCAACAGCTCCTCAATGAGTTGA
TGACTTCCGATGGAGCTAATTTCTCTCTCATGCGCCATACCATCGGCGCG
TCTGATCTGTCCGGTGATCCGGTCTACACCTATGATGACAACGGAAACGA
AGCAGACCCCTCACTTTCCGGCTTCGGTCTCGGCGACCGTGGCACTGCTA
TGGCGGAAATGTTGGCCACGATGAAATCGTTGCAGTCAGACCTGAAGGTG
CTTGGGTCCCCGTGGAGTGCGCCCGGATGGATGAAATTGAATGGCGTGAT
TGATGGCAACGCGACTGATAACAACCTTAACGATGGCTACCTTACCAGTG
GTGGCACGGGAAGCACCGGCTACTCCAGTGCTTTCGCGCAGTACTTCGTG
AAATACATCCAAGCGTACGAAGCATTAGGAGCTACGGTCGATGCCATTAC
GATTCAGAATGAGCCGTTAAATAGTCAATCTGGATATCCCACCATGTATG
TTTACGACTATGAGTCTGCGCAGCTGATCCAAAAATACATTGGACCGGCT
CTTGCCGACGCTGGACTGAGCACGGAAATCTGGGCCTTCGATCACAATAC
TG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NEG1ATCC64974_82880Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_82880-T1ATCC64974_82880-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_82880-T1.cdsATCC64974_82880-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_82880-T1.exon2ATCC64974_82880-T1.exon2Aspergillus niger N402exon
ATCC64974_82880-T1.exon1ATCC64974_82880-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
NoteCAZy:GH30_6
NoteCAZy:GH30_7
NoteCAZy:GH30_2
NoteCAZy:GH30_1
NoteCAZy:GH30
NoteCAZy:GH30_3
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR033453
DBxrefInterPro:IPR033452
DBxrefPFAM:PF17189
DBxrefPFAM:PF02055
Product6-beta-D-glucanase neg1
ProductEndo-1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000014.1supercontigOGUI01000014.1:156553..158081 -
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