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ATCC64974_83020-T1, ATCC64974_83020-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_83020-T1
Unique NameATCC64974_83020-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000014.1:202850..204371-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_83020-T1 ID=ATCC64974_83020-T1|Name=ATCC64974_83020-T1|organism=Aspergillus niger N402|type=mRNA|length=1522bp|location=Sequence derived from alignment at OGUI01000014.1:202850..204371- (Aspergillus niger N402)
ATGTCGCGCATTCCACAATTTCGCCTTTGGCGATCCATCATCTTGTGTGT
TGTTTGGTCTCTCCCTTGCTTCCACGTCCTGGCGATCGACCTCGATCTCC
AAAACCCTGGTGAGTTTCGCAGACCTTGATCAATACTTAGACCTCTGTTG
GAAGCTAACAGACACTTCTTGTCCCTTAGACAGCGTTAAGAGCGTCGCAA
GCGAACTCGCCTGGGACCTAGTCAGCTTCTATACGGGCAACAACACCGGC
GATGTTCCTGGAAACCTTCCAGATCCATACTATTGGTGGGAGGCGGGGGC
CTTCTTCGGCACCCTGGTCAATTACTGGGCCTACACCGGAGATACCACAT
ACAACGACCTGACCGCGCAAGCCATCCTCCACCAGGTCGGTCCCAATCGA
GATTTCATGCCCGCCAACCAGACGCGCACGGAGGGAAACGATGACCAGGC
GTTCTGGGCCTTCGCTGCTCTCCGCGCCGCCGAGCGAAACTTCCCCAATC
CCCCAGCCGACCAACCGTCGTGGCTATCTCTCGCGCAGGCCGTGTTCAAC
GAACAAGCGCAGCGATGGAATACGCAGAAGTGTGGAGGAGGGCTGAAGTG
GCAGATCTATACTTTCAACAGCGGCTACACATACCGGAATTCGATCTCGA
ACGGATGCTTCTTCAACATCGCGGCTCGACTCGCGCGATATACGGGCAAC
GCGACGTATGCGGATTGGGCGAATAAGGTCTGGGACTGGGTGACGGACGT
AGGACTGATTGGACCGGAGTATCATGTGTTCGATGGGACGAGTGAGGAGA
ACAACTGCACCGACCTCAATCATATTGAGTGGACTTACAATAACGGGGTG
TTCCTGCTCGGGGCAGCACACATGTGGAACTATGTAAGTATGAGACCTGG
TCACTCTGCTCTGTTATGCGACGTACAACTAATGAGAAAGCAGACCAACG
GAGATGAGAACTGGCGCAAACGGGTCAACGGCCTTCTTCAGGCTCAGAGC
AGCTTCCTCTCCACGAACGAGAGCTCCAAGAACGTGCTTTACGAGGCCGC
ATGCGAGACCGTGGGGACCTGCCAAACGGACCAATTCTCGTTCAAGGCCT
ACCTGGTGCGGTGGATGGCTGACACGGCCCGACTGGCTCCCTTCACCTAC
GATACCATTATGGCACGCCTGCAACCGACAGCCAAGGCAGCAGCAGCCCA
ATGTGTGGGAGGTAAGACGGGTACATACTGTGGGATGCAATGGACCACGG
GGACCTATGATGGTACAGTGGGCGTGGGACAGCAGATGGCCGCCTTGGAA
GTCGTCCAGGCCAATCTTCTCCAGGCCAACCCCGGCCCACTCACTCATAC
CACGGGAGGATCCAGTCAGGGGAACAGCGCCGCAGGGACCCAGGCTTCAG
ATTCATCCCGAGATCCCAGTGAACTGCGCCCGATCACCACATCGGATCGA
ATCGGCGCAGGAGTAGTGACGGGAGTCACAGCATGCTTGGTGCTTGGGGT
CACGGCTTTCATGGTGTCGTAA
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Coding sequence (CDS) from alignment at OGUI01000014.1:202850..204371-

>ATCC64974_83020-T1 ID=ATCC64974_83020-T1|Name=ATCC64974_83020-T1|organism=Aspergillus niger N402|type=CDS|length=4176bp|location=Sequence derived from alignment at OGUI01000014.1:202850..204371- (Aspergillus niger N402)
ACCAACGGAGATGAGAACTGGCGCAAACGGGTCAACGGCCTTCTTCAGGC
TCAGAGCAGCTTCCTCTCCACGAACGAGAGCTCCAAGAACGTGCTTTACG
AGGCCGCATGCGAGACCGTGGGGACCTGCCAAACGGACCAATTCTCGTTC
AAGGCCTACCTGGTGCGGTGGATGGCTGACACGGCCCGACTGGCTCCCTT
CACCTACGATACCATTATGGCACGCCTGCAACCGACAGCCAAGGCAGCAG
CAGCCCAATGTGTGGGAGGTAAGACGGGTACATACTGTGGGATGCAATGG
ACCACGGGGACCTATGATGGTACAGTGGGCGTGGGACAGCAGATGGCCGC
CTTGGAAGTCGTCCAGGCCAATCTTCTCCAGGCCAACCCCGGCCCACTCA
CTCATACCACGGGAGGATCCAGTCAGGGGAACAGCGCCGCAGGGACCCAG
GCTTCAGATTCATCCCGAGATCCCAGTGAACTGCGCCCGATCACCACATC
GGATCGAATCGGCGCAGGAGTAGTGACGGGAGTCACAGCATGCTTGGTGC
TTGGGGTCACGGCTTTCATGGTGTCGTAAACAGCGTTAAGAGCGTCGCAA
GCGAACTCGCCTGGGACCTAGTCAGCTTCTATACGGGCAACAACACCGGC
GATGTTCCTGGAAACCTTCCAGATCCATACTATTGGTGGGAGGCGGGGGC
CTTCTTCGGCACCCTGGTCAATTACTGGGCCTACACCGGAGATACCACAT
ACAACGACCTGACCGCGCAAGCCATCCTCCACCAGGTCGGTCCCAATCGA
GATTTCATGCCCGCCAACCAGACGCGCACGGAGGGAAACGATGACCAGGC
GTTCTGGGCCTTCGCTGCTCTCCGCGCCGCCGAGCGAAACTTCCCCAATC
CCCCAGCCGACCAACCGTCGTGGCTATCTCTCGCGCAGGCCGTGTTCAAC
GAACAAGCGCAGCGATGGAATACGCAGAAGTGTGGAGGAGGGCTGAAGTG
GCAGATCTATACTTTCAACAGCGGCTACACATACCGGAATTCGATCTCGA
ACGGATGCTTCTTCAACATCGCGGCTCGACTCGCGCGATATACGGGCAAC
GCGACGTATGCGGATTGGGCGAATAAGGTCTGGGACTGGGTGACGGACGT
AGGACTGATTGGACCGGAGTATCATGTGTTCGATGGGACGAGTGAGGAGA
ACAACTGCACCGACCTCAATCATATTGAGTGGACTTACAATAACGGGGTG
TTCCTGCTCGGGGCAGCACACATGTGGAACTATATGTCGCGCATTCCACA
ATTTCGCCTTTGGCGATCCATCATCTTGTGTGTTGTTTGGTCTCTCCCTT
GCTTCCACGTCCTGGCGATCGACCTCGATCTCCAAAACCCTGACCAACGG
AGATGAGAACTGGCGCAAACGGGTCAACGGCCTTCTTCAGGCTCAGAGCA
GCTTCCTCTCCACGAACGAGAGCTCCAAGAACGTGCTTTACGAGGCCGCA
TGCGAGACCGTGGGGACCTGCCAAACGGACCAATTCTCGTTCAAGGCCTA
CCTGGTGCGGTGGATGGCTGACACGGCCCGACTGGCTCCCTTCACCTACG
ATACCATTATGGCACGCCTGCAACCGACAGCCAAGGCAGCAGCAGCCCAA
TGTGTGGGAGGTAAGACGGGTACATACTGTGGGATGCAATGGACCACGGG
GACCTATGATGGTACAGTGGGCGTGGGACAGCAGATGGCCGCCTTGGAAG
TCGTCCAGGCCAATCTTCTCCAGGCCAACCCCGGCCCACTCACTCATACC
ACGGGAGGATCCAGTCAGGGGAACAGCGCCGCAGGGACCCAGGCTTCAGA
TTCATCCCGAGATCCCAGTGAACTGCGCCCGATCACCACATCGGATCGAA
TCGGCGCAGGAGTAGTGACGGGAGTCACAGCATGCTTGGTGCTTGGGGTC
ACGGCTTTCATGGTGTCGTAAACAGCGTTAAGAGCGTCGCAAGCGAACTC
GCCTGGGACCTAGTCAGCTTCTATACGGGCAACAACACCGGCGATGTTCC
TGGAAACCTTCCAGATCCATACTATTGGTGGGAGGCGGGGGCCTTCTTCG
GCACCCTGGTCAATTACTGGGCCTACACCGGAGATACCACATACAACGAC
CTGACCGCGCAAGCCATCCTCCACCAGGTCGGTCCCAATCGAGATTTCAT
GCCCGCCAACCAGACGCGCACGGAGGGAAACGATGACCAGGCGTTCTGGG
CCTTCGCTGCTCTCCGCGCCGCCGAGCGAAACTTCCCCAATCCCCCAGCC
GACCAACCGTCGTGGCTATCTCTCGCGCAGGCCGTGTTCAACGAACAAGC
GCAGCGATGGAATACGCAGAAGTGTGGAGGAGGGCTGAAGTGGCAGATCT
ATACTTTCAACAGCGGCTACACATACCGGAATTCGATCTCGAACGGATGC
TTCTTCAACATCGCGGCTCGACTCGCGCGATATACGGGCAACGCGACGTA
TGCGGATTGGGCGAATAAGGTCTGGGACTGGGTGACGGACGTAGGACTGA
TTGGACCGGAGTATCATGTGTTCGATGGGACGAGTGAGGAGAACAACTGC
ACCGACCTCAATCATATTGAGTGGACTTACAATAACGGGGTGTTCCTGCT
CGGGGCAGCACACATGTGGAACTATATGTCGCGCATTCCACAATTTCGCC
TTTGGCGATCCATCATCTTGTGTGTTGTTTGGTCTCTCCCTTGCTTCCAC
GTCCTGGCGATCGACCTCGATCTCCAAAACCCTGACCAACGGAGATGAGA
ACTGGCGCAAACGGGTCAACGGCCTTCTTCAGGCTCAGAGCAGCTTCCTC
TCCACGAACGAGAGCTCCAAGAACGTGCTTTACGAGGCCGCATGCGAGAC
CGTGGGGACCTGCCAAACGGACCAATTCTCGTTCAAGGCCTACCTGGTGC
GGTGGATGGCTGACACGGCCCGACTGGCTCCCTTCACCTACGATACCATT
ATGGCACGCCTGCAACCGACAGCCAAGGCAGCAGCAGCCCAATGTGTGGG
AGGTAAGACGGGTACATACTGTGGGATGCAATGGACCACGGGGACCTATG
ATGGTACAGTGGGCGTGGGACAGCAGATGGCCGCCTTGGAAGTCGTCCAG
GCCAATCTTCTCCAGGCCAACCCCGGCCCACTCACTCATACCACGGGAGG
ATCCAGTCAGGGGAACAGCGCCGCAGGGACCCAGGCTTCAGATTCATCCC
GAGATCCCAGTGAACTGCGCCCGATCACCACATCGGATCGAATCGGCGCA
GGAGTAGTGACGGGAGTCACAGCATGCTTGGTGCTTGGGGTCACGGCTTT
CATGGTGTCGTAAACAGCGTTAAGAGCGTCGCAAGCGAACTCGCCTGGGA
CCTAGTCAGCTTCTATACGGGCAACAACACCGGCGATGTTCCTGGAAACC
TTCCAGATCCATACTATTGGTGGGAGGCGGGGGCCTTCTTCGGCACCCTG
GTCAATTACTGGGCCTACACCGGAGATACCACATACAACGACCTGACCGC
GCAAGCCATCCTCCACCAGGTCGGTCCCAATCGAGATTTCATGCCCGCCA
ACCAGACGCGCACGGAGGGAAACGATGACCAGGCGTTCTGGGCCTTCGCT
GCTCTCCGCGCCGCCGAGCGAAACTTCCCCAATCCCCCAGCCGACCAACC
GTCGTGGCTATCTCTCGCGCAGGCCGTGTTCAACGAACAAGCGCAGCGAT
GGAATACGCAGAAGTGTGGAGGAGGGCTGAAGTGGCAGATCTATACTTTC
AACAGCGGCTACACATACCGGAATTCGATCTCGAACGGATGCTTCTTCAA
CATCGCGGCTCGACTCGCGCGATATACGGGCAACGCGACGTATGCGGATT
GGGCGAATAAGGTCTGGGACTGGGTGACGGACGTAGGACTGATTGGACCG
GAGTATCATGTGTTCGATGGGACGAGTGAGGAGAACAACTGCACCGACCT
CAATCATATTGAGTGGACTTACAATAACGGGGTGTTCCTGCTCGGGGCAG
CACACATGTGGAACTATATGTCGCGCATTCCACAATTTCGCCTTTGGCGA
TCCATCATCTTGTGTGTTGTTTGGTCTCTCCCTTGCTTCCACGTCCTGGC
GATCGACCTCGATCTCCAAAACCCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016052carbohydrate catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0008496mannan endo-1,6-alpha-mannosidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_83020ATCC64974_83020Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_83020-T1ATCC64974_83020-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_83020-T1.cdsATCC64974_83020-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_83020-T1.exon3ATCC64974_83020-T1.exon3Aspergillus niger N402exon
ATCC64974_83020-T1.exon2ATCC64974_83020-T1.exon2Aspergillus niger N402exon
ATCC64974_83020-T1.exon1ATCC64974_83020-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000141.3
NoteSECRETED:SignalP(1-28)
NoteCAZy:GH76
DBxrefInterPro:IPR008928
DBxrefInterPro:IPR014480
DBxrefInterPro:IPR005198
DBxrefPFAM:PF03663
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000014.1supercontigOGUI01000014.1:202850..204371 -
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