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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000014.1:223401..224517+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_83080-T1 ID=ATCC64974_83080-T1|Name=ATCC64974_83080-T1|organism=Aspergillus niger N402|type=mRNA|length=1117bp|location=Sequence derived from alignment at OGUI01000014.1:223401..224517+ (Aspergillus niger N402)
ATGGAGCCCCTCCAGCATCATCTTCCGCAAACTTCGCTGGCTTTTCTCGC
CTTACTGGCCGTCCCGATAACGGCGCTGGTATGGGATCGCATATTGAACC
CACTTCCGACAACAAAGCGGGCTTGGCTTGTTGGCAAGAAGCAACCATCT
CGGATCACTTCACTGGAGTGCCCCTACAGCTACATCCGCCAAATCTACGG
TAAACACCACTGGGCCCCATTTGTCGACAAGCTGGCGCCCAGCCTCAAGT
TGGAGGACCCGCCGAAGTACCAGCTGGTCCTTGAGATTATGGACGGCATC
CATCTCTGTTTGATACTGGTTGATGATGTAAGTGCAGCACCCCACTGAAC
ATATGGAGTAGAGAGCTAATAACCCCATAAGATCTCGGACGGGAGTAACT
TTCGCAAGGGACATCCCGCCGCGCACAAGATATACGGCCCTTCAGAGACT
GCGAACCGTGCCTACTATCGCGTGACACAACTTTTAAACCGGACCGTCCA
CGAATTTCCTCGTCTTGCGCCCTTTCTGATGCAGTGCCTGGAGGAGATCC
TGGAAGGCCAAGATATGTCCCTTGTATGGCGAAGGGATGGTCTTGCCAGC
TTTCCAGTGGGTCCAAAGGAACGGGATGCAGCATATCGGCAAATGGCGTC
GCTGAAAACGGGCGCATTGTTTCGTTTGCTCGGTCAGCTGGTACTAGAGA
ATAAGTCCATGGATGCTACCATGACTACGGTGGCGTATGTGCAAAGACAT
CCGAGCATTGGGGATTATGGCTGATTGACGTCTACACAGGTGGTGCTCAC
AGCTGCAGAATGACTGCAAGAACGTTTATTCGACCGATTATGCGAAAGCC
AAAGGTGCACTGGCAGAAGACCTGCGCAACGGCGAGCTTTCCTTCCCCAT
AGTGGTGGCATTGGATGCTCCCGAGGGTCATCTGATAGCGCGCGCCTTGG
AATACGGCTCACCCCATAATATCCGTAATGCTCTACGAGTAATTCAAAGA
GAAGATGTGCGTAGCGCCTGCTTGTGGGATTTGAAGAAATCAAGTGCCTC
CGTACAGGATTGGCTGGAAGTTTGGGGTCGGAAGGAAAAAATGGATGTCA
AGAGTGTGAAGCCGTAA back to topCoding sequence (CDS) from alignment at OGUI01000014.1:223401..224517+ >ATCC64974_83080-T1 ID=ATCC64974_83080-T1|Name=ATCC64974_83080-T1|organism=Aspergillus niger N402|type=CDS|length=3024bp|location=Sequence derived from alignment at OGUI01000014.1:223401..224517+ (Aspergillus niger N402)
ATGGAGCCCCTCCAGCATCATCTTCCGCAAACTTCGCTGGCTTTTCTCGC
CTTACTGGCCGTCCCGATAACGGCGCTGGTATGGGATCGCATATTGAACC
CACTTCCGACAACAAAGCGGGCTTGGCTTGTTGGCAAGAAGCAACCATCT
CGGATCACTTCACTGGAGTGCCCCTACAGCTACATCCGCCAAATCTACGG
TAAACACCACTGGGCCCCATTTGTCGACAAGCTGGCGCCCAGCCTCAAGT
TGGAGGACCCGCCGAAGTACCAGCTGGTCCTTGAGATTATGGACGGCATC
CATCTCTGTTTGATACTGGTTGATGATATCTCGGACGGGAGTAACTTTCG
CAAGGGACATCCCGCCGCGCACAAGATATACGGCCCTTCAGAGACTGCGA
ACCGTGCCTACTATCGCGTGACACAACTTTTAAACCGGACCGTCCACGAA
TTTCCTCGTCTTGCGCCCTTTCTGATGCAGTGCCTGGAGGAGATCCTGGA
AGGCCAAGATATGTCCCTTGTATGGCGAAGGGATGGTCTTGCCAGCTTTC
CAGTGGGTCCAAAGGAACGGGATGCAGCATATCGGCAAATGGCGTCGCTG
AAAACGGGCGCATTGTTTCGTTTGCTCGGTCAGCTGGTACTAGAGAATAA
GTCCATGGATGCTACCATGACTACGGTGGCGTGGTGCTCACAGCTGCAGA
ATGACTGCAAGAACGTTTATTCGACCGATTATGCGAAAGCCAAAGGTGCA
CTGGCAGAAGACCTGCGCAACGGCGAGCTTTCCTTCCCCATAGTGGTGGC
ATTGGATGCTCCCGAGGGTCATCTGATAGCGCGCGCCTTGGAATACGGCT
CACCCCATAATATCCGTAATGCTCTACGAGTAATTCAAAGAGAAGATGTG
CGTAGCGCCTGCTTGTGGGATTTGAAGAAATCAAGTGCCTCCGTACAGGA
TTGGCTGGAAGTTTGGGGTCGGAAGGAAAAAATGGATGTCAAGAGTGTGA
AGCCGTAAATGGAGCCCCTCCAGCATCATCTTCCGCAAACTTCGCTGGCT
TTTCTCGCCTTACTGGCCGTCCCGATAACGGCGCTGGTATGGGATCGCAT
ATTGAACCCACTTCCGACAACAAAGCGGGCTTGGCTTGTTGGCAAGAAGC
AACCATCTCGGATCACTTCACTGGAGTGCCCCTACAGCTACATCCGCCAA
ATCTACGGTAAACACCACTGGGCCCCATTTGTCGACAAGCTGGCGCCCAG
CCTCAAGTTGGAGGACCCGCCGAAGTACCAGCTGGTCCTTGAGATTATGG
ACGGCATCCATCTCTGTTTGATACTGGTTGATGATATCTCGGACGGGAGT
AACTTTCGCAAGGGACATCCCGCCGCGCACAAGATATACGGCCCTTCAGA
GACTGCGAACCGTGCCTACTATCGCGTGACACAACTTTTAAACCGGACCG
TCCACGAATTTCCTCGTCTTGCGCCCTTTCTGATGCAGTGCCTGGAGGAG
ATCCTGGAAGGCCAAGATATGTCCCTTGTATGGCGAAGGGATGGTCTTGC
CAGCTTTCCAGTGGGTCCAAAGGAACGGGATGCAGCATATCGGCAAATGG
CGTCGCTGAAAACGGGCGCATTGTTTCGTTTGCTCGGTCAGCTGGTACTA
GAGAATAAGTCCATGGATGCTACCATGACTACGGTGGCGTGGTGCTCACA
GCTGCAGAATGACTGCAAGAACGTTTATTCGACCGATTATGCGAAAGCCA
AAGGTGCACTGGCAGAAGACCTGCGCAACGGCGAGCTTTCCTTCCCCATA
GTGGTGGCATTGGATGCTCCCGAGGGTCATCTGATAGCGCGCGCCTTGGA
ATACGGCTCACCCCATAATATCCGTAATGCTCTACGAGTAATTCAAAGAG
AAGATGTGCGTAGCGCCTGCTTGTGGGATTTGAAGAAATCAAGTGCCTCC
GTACAGGATTGGCTGGAAGTTTGGGGTCGGAAGGAAAAAATGGATGTCAA
GAGTGTGAAGCCGTAAATGGAGCCCCTCCAGCATCATCTTCCGCAAACTT
CGCTGGCTTTTCTCGCCTTACTGGCCGTCCCGATAACGGCGCTGGTATGG
GATCGCATATTGAACCCACTTCCGACAACAAAGCGGGCTTGGCTTGTTGG
CAAGAAGCAACCATCTCGGATCACTTCACTGGAGTGCCCCTACAGCTACA
TCCGCCAAATCTACGGTAAACACCACTGGGCCCCATTTGTCGACAAGCTG
GCGCCCAGCCTCAAGTTGGAGGACCCGCCGAAGTACCAGCTGGTCCTTGA
GATTATGGACGGCATCCATCTCTGTTTGATACTGGTTGATGATATCTCGG
ACGGGAGTAACTTTCGCAAGGGACATCCCGCCGCGCACAAGATATACGGC
CCTTCAGAGACTGCGAACCGTGCCTACTATCGCGTGACACAACTTTTAAA
CCGGACCGTCCACGAATTTCCTCGTCTTGCGCCCTTTCTGATGCAGTGCC
TGGAGGAGATCCTGGAAGGCCAAGATATGTCCCTTGTATGGCGAAGGGAT
GGTCTTGCCAGCTTTCCAGTGGGTCCAAAGGAACGGGATGCAGCATATCG
GCAAATGGCGTCGCTGAAAACGGGCGCATTGTTTCGTTTGCTCGGTCAGC
TGGTACTAGAGAATAAGTCCATGGATGCTACCATGACTACGGTGGCGTGG
TGCTCACAGCTGCAGAATGACTGCAAGAACGTTTATTCGACCGATTATGC
GAAAGCCAAAGGTGCACTGGCAGAAGACCTGCGCAACGGCGAGCTTTCCT
TCCCCATAGTGGTGGCATTGGATGCTCCCGAGGGTCATCTGATAGCGCGC
GCCTTGGAATACGGCTCACCCCATAATATCCGTAATGCTCTACGAGTAAT
TCAAAGAGAAGATGTGCGTAGCGCCTGCTTGTGGGATTTGAAGAAATCAA
GTGCCTCCGTACAGGATTGGCTGGAAGTTTGGGGTCGGAAGGAAAAAATG
GATGTCAAGAGTGTGAAGCCGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008299 | isoprenoid biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_83080-T1 | ATCC64974_83080-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000141.5 |
| Note | SMCOG1182:Polyprenyl synthetase |
| DBxref | InterPro:IPR008949 |
| DBxref | InterPro:IPR000092 |
| DBxref | PFAM:PF00348 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000014.1 | supercontig | OGUI01000014.1:223401..224517 + |
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