|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000014.1:241492..242490+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_83160-T1 ID=ATCC64974_83160-T1|Name=ATCC64974_83160-T1|organism=Aspergillus niger N402|type=mRNA|length=999bp|location=Sequence derived from alignment at OGUI01000014.1:241492..242490+ (Aspergillus niger N402)
ATGAAATTCCTCAAAGCCAAGGGTAGCTTGCTGTCGTCTGGCATATACCT
CATTGCATTGGCCCCCTTTGTCAACGCAAAATGCGCTCTTCCGTCGACAT
ATAGTTGGACTTCGACCGATGCTCTCGCCACCCCAAAGTCCGGATGGACT
GCACTCAAGGACTTCACCGATGTCGTCTCTAACGGCAAACATATTGTCTA
TGCGTCCACTACCGACACACAGGGAAATTACGGCTCCATGGGCTTTGGCG
CCTTTTCGGACTGGTCGGACATGGCATCCGCTAGTCAAACGGCCACAAGC
TTCAGCGCCGTAGCTCCAACCTTGTTCTACTTCCAGCCAAAGAGTATCTG
GGTTCTGGCCTACCAATGGGGCTCCAGCACTTTCACCTACCGCACCTCTC
AAGATCCCACCAATGTCAACGGCTGGTCATCCGAGCAAGCTCTTTTCACG
GGCAAAATCAGCGGCTCAAGTACCGGTGCCATTGATCAGACTGTGATTGG
TGATGATACGAATATGTATCTTTTCTTTGCCGGCGACAATGGCAAGATCT
ACCGATCCAGCATGTCTATCAATGACTTCCCCGGAAGCTTCGGCAGCCAG
TACGAGGAGATCCTCAGCGGCGCGACCAACGATTTGTTCGAGGCGGTCCA
AGTGTACACCGTCGACGGCGGCGAGGGTGACAGCAAGTACCTCATGATCG
TCGAGGCGATCGGTTCCACCGGACATCGTTATTTCCGCTCCTTCACGGCC
AGCAGTCTCGGCGGAGAGTGGACAGCCCAGGCGGCAAGTGAAGATCAACC
CTTCGCGGGCAAAGCCAACAGTGGCGCCACCTGGACCGACGACATCAGTC
ATGGTGACTTGGTTCGCAACAACCCTGATCAAACCATGACGGTCGATCCT
TGCAACCTCCAGCTTCTCTACCAGGGCCATGACCCCAACAGCAATAGTGA
CTACAACCTCTTGCCCTGGAAGCCAGGAGTTCTTACCTTGAAGCAGTGA back to topCoding sequence (CDS) from alignment at OGUI01000014.1:241492..242490+ >ATCC64974_83160-T1 ID=ATCC64974_83160-T1|Name=ATCC64974_83160-T1|organism=Aspergillus niger N402|type=CDS|length=999bp|location=Sequence derived from alignment at OGUI01000014.1:241492..242490+ (Aspergillus niger N402)
ATGAAATTCCTCAAAGCCAAGGGTAGCTTGCTGTCGTCTGGCATATACCT
CATTGCATTGGCCCCCTTTGTCAACGCAAAATGCGCTCTTCCGTCGACAT
ATAGTTGGACTTCGACCGATGCTCTCGCCACCCCAAAGTCCGGATGGACT
GCACTCAAGGACTTCACCGATGTCGTCTCTAACGGCAAACATATTGTCTA
TGCGTCCACTACCGACACACAGGGAAATTACGGCTCCATGGGCTTTGGCG
CCTTTTCGGACTGGTCGGACATGGCATCCGCTAGTCAAACGGCCACAAGC
TTCAGCGCCGTAGCTCCAACCTTGTTCTACTTCCAGCCAAAGAGTATCTG
GGTTCTGGCCTACCAATGGGGCTCCAGCACTTTCACCTACCGCACCTCTC
AAGATCCCACCAATGTCAACGGCTGGTCATCCGAGCAAGCTCTTTTCACG
GGCAAAATCAGCGGCTCAAGTACCGGTGCCATTGATCAGACTGTGATTGG
TGATGATACGAATATGTATCTTTTCTTTGCCGGCGACAATGGCAAGATCT
ACCGATCCAGCATGTCTATCAATGACTTCCCCGGAAGCTTCGGCAGCCAG
TACGAGGAGATCCTCAGCGGCGCGACCAACGATTTGTTCGAGGCGGTCCA
AGTGTACACCGTCGACGGCGGCGAGGGTGACAGCAAGTACCTCATGATCG
TCGAGGCGATCGGTTCCACCGGACATCGTTATTTCCGCTCCTTCACGGCC
AGCAGTCTCGGCGGAGAGTGGACAGCCCAGGCGGCAAGTGAAGATCAACC
CTTCGCGGGCAAAGCCAACAGTGGCGCCACCTGGACCGACGACATCAGTC
ATGGTGACTTGGTTCGCAACAACCCTGATCAAACCATGACGGTCGATCCT
TGCAACCTCCAGCTTCTCTACCAGGGCCATGACCCCAACAGCAATAGTGA
CTACAACCTCTTGCCCTGGAAGCCAGGAGTTCTTACCTTGAAGCAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046556 | alpha-L-arabinofuranosidase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0046373 | L-arabinose metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_83160-T1 | ATCC64974_83160-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | CAZy:GH62 |
| DBxref | InterPro:IPR005193 |
| DBxref | InterPro:IPR023296 |
| DBxref | PFAM:PF03664 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000014.1 | supercontig | OGUI01000014.1:241492..242490 + |
|
