ATCC64974_83340-T1, ATCC64974_83340-T1 (mRNA) Aspergillus niger N402

Overview


Name	ATCC64974_83340-T1
Unique Name	ATCC64974_83340-T1
Type	mRNA
Organism	Aspergillus niger N402

Sequences

The following sequences are available for this feature:

mRNA from alignment at OGUI01000014.1:288261..289916-
coding sequence from alignment at OGUI01000014.1:288261..289916-

mRNA from alignment at OGUI01000014.1:288261..289916-

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>ATCC64974_83340-T1 ID=ATCC64974_83340-T1|Name=ATCC64974_83340-T1|organism=Aspergillus niger N402|type=mRNA|length=1656bp|location=Sequence derived from alignment at OGUI01000014.1:288261..289916- (Aspergillus niger N402)
ATGTCTTCCAGCTCCCAGCACGCCAGGAAATGGTCGACGATGCCGATCGA
CACGAACGCGGCCCCGTTCTTGAGCCTCGACTTCGAGGATGAGGTTGTTT
ACGAGGACGAGCGACGCCAAAGCATCAAACAGGGGACCATCTGTGGGCTG
GTCGAGCAACTGACACGCCATGATCGACTAGACGTCTCGTTCAACGAGAC
CTTCCTCATGACCTACCCTACATTCGTCTGCGGCAGGGAACTCTTTGAGA
TTCTCCTCCAACGACTTAACATGCCCCCTCCTCCGGGCCTTACCGACTCT
GACCTCTCACGATGGACAGAACAGAAGCAGAAGACCGTCCGCTTCCGCGT
CATTAACATACTCAAGACCTGGCTAGAGCGATACTGGATGGAACCACCCA
CCGAATCAACTATGGACTTCCTCCGCCACATCCACGCTCAAATCCAACCT
CTCACCAACGTTCCCACCTGCTCGCAACTCCTCACCATCATCGAACACCG
CTTGAAGGGCCAAGACATCCTCAAACGATACATGACTCCCCCAAACAGCA
CAGTGCCCAAACCACTCACCCCGAGGAACATGAAGAAGCTCAAGTTCCTC
GACCTCGATCCGATGGAGCTCGCCCGCCAACTCACCATCATCGAATCCCG
TCTCTTCGCTCGAATCAAACCTACCGAGTGTCTCAACAAATCATGGCAGA
AGAAAGATACCGATAGGCCGCCATCTGTTCCTGCCTCACGCCGCACCAGC
ACCAGCACAACCAGTAGCACCAGCTCCATCGAACGCACCACCGGCGTCAA
CGCCACGATTCTACACTCCAACCAGCTCGCAAACTGGGTAGGAGAGATGA
TCCTGGCCCAGGATGAGATGAAGAAGCGTGTCTCGCTGATCAAACAGATT
GTCAATATTGCCGATGTATGCCCCCCTGCACCCAGCACTATCATCCTACA
TACTAACATACAGGTGTGATGACAGAACTGCCGCTCCTTAAGCAACTTCG
CAACCATGATGTCCCTCATCTCCGGCCTCGCCACAAGCCCTATCTACCGT
CTCCACCGCACCTGGACGCAAGTGAACCCCAAGACGCGCAAACTCCTCGA
AGACATGCAAAGTCTCATGTCCAGCGAGAAGAACTTCATCAAGTACCGAG
ATAAGCTACACGGGGCAAGCCCACCATGCATTCCCTTCCTCGGTACGTCC
CTTCCCCATCACCATTCATAACCCAACCCACACTCTCATCCACATACTAA
CACACCAAACCGTAATAAAGGAACTTACCTAACCGACCTCACCTTCATTG
AAGACGGCATCCCGAGCCACACCCCACCGCCCAACGTCATGATAAACTTC
AGCAAGCGGGTCAAAGTCGCCGAGATCCTGCGCGAGATTGAGAGCTGCCA
GGCCGTCGGGTACAGTTTGCTTCCTGTCCCCGAGATACAGGAGTTTATTG
TCCGGAATGTGCAAGCCGCCGGGGGTGATGTCGAGGGGATGTATGAGAGG
AGTTTGGCGCTGGAGCCGAGGATGGTAGGCGAGGAGAGGATGAATATGGG
GCAGCTGGGGGTCGGGATGATGGGGATGAATATGGGGAGGGGAGGGTATA
TTTCTACGGGGAGTCATATGAGTTCGGTGGTTATTGCAAGTATGGCTATG
AGGTAG

Coding sequence (CDS) from alignment at OGUI01000014.1:288261..289916-

>ATCC64974_83340-T1 ID=ATCC64974_83340-T1|Name=ATCC64974_83340-T1|organism=Aspergillus niger N402|type=CDS|length=4554bp|location=Sequence derived from alignment at OGUI01000014.1:288261..289916- (Aspergillus niger N402)
GAACTTACCTAACCGACCTCACCTTCATTGAAGACGGCATCCCGAGCCAC
ACCCCACCGCCCAACGTCATGATAAACTTCAGCAAGCGGGTCAAAGTCGC
CGAGATCCTGCGCGAGATTGAGAGCTGCCAGGCCGTCGGGTACAGTTTGC
TTCCTGTCCCCGAGATACAGGAGTTTATTGTCCGGAATGTGCAAGCCGCC
GGGGGTGATGTCGAGGGGATGTATGAGAGGAGTTTGGCGCTGGAGCCGAG
GATGGTAGGCGAGGAGAGGATGAATATGGGGCAGCTGGGGGTCGGGATGA
TGGGGATGAATATGGGGAGGGGAGGGTATATTTCTACGGGGAGTCATATG
AGTTCGGTGGTTATTGCAAGTATGGCTATGAGGTAGAACTGCCGCTCCTT
AAGCAACTTCGCAACCATGATGTCCCTCATCTCCGGCCTCGCCACAAGCC
CTATCTACCGTCTCCACCGCACCTGGACGCAAGTGAACCCCAAGACGCGC
AAACTCCTCGAAGACATGCAAAGTCTCATGTCCAGCGAGAAGAACTTCAT
CAAGTACCGAGATAAGCTACACGGGGCAAGCCCACCATGCATTCCCTTCC
TCGATGTCTTCCAGCTCCCAGCACGCCAGGAAATGGTCGACGATGCCGAT
CGACACGAACGCGGCCCCGTTCTTGAGCCTCGACTTCGAGGATGAGGTTG
TTTACGAGGACGAGCGACGCCAAAGCATCAAACAGGGGACCATCTGTGGG
CTGGTCGAGCAACTGACACGCCATGATCGACTAGACGTCTCGTTCAACGA
GACCTTCCTCATGACCTACCCTACATTCGTCTGCGGCAGGGAACTCTTTG
AGATTCTCCTCCAACGACTTAACATGCCCCCTCCTCCGGGCCTTACCGAC
TCTGACCTCTCACGATGGACAGAACAGAAGCAGAAGACCGTCCGCTTCCG
CGTCATTAACATACTCAAGACCTGGCTAGAGCGATACTGGATGGAACCAC
CCACCGAATCAACTATGGACTTCCTCCGCCACATCCACGCTCAAATCCAA
CCTCTCACCAACGTTCCCACCTGCTCGCAACTCCTCACCATCATCGAACA
CCGCTTGAAGGGCCAAGACATCCTCAAACGATACATGACTCCCCCAAACA
GCACAGTGCCCAAACCACTCACCCCGAGGAACATGAAGAAGCTCAAGTTC
CTCGACCTCGATCCGATGGAGCTCGCCCGCCAACTCACCATCATCGAATC
CCGTCTCTTCGCTCGAATCAAACCTACCGAGTGTCTCAACAAATCATGGC
AGAAGAAAGATACCGATAGGCCGCCATCTGTTCCTGCCTCACGCCGCACC
AGCACCAGCACAACCAGTAGCACCAGCTCCATCGAACGCACCACCGGCGT
CAACGCCACGATTCTACACTCCAACCAGCTCGCAAACTGGGTAGGAGAGA
TGATCCTGGCCCAGGATGAGATGAAGAAGCGTGTCTCGCTGATCAAACAG
ATTGTCAATATTGCCGATGAACTTACCTAACCGACCTCACCTTCATTGAA
GACGGCATCCCGAGCCACACCCCACCGCCCAACGTCATGATAAACTTCAG
CAAGCGGGTCAAAGTCGCCGAGATCCTGCGCGAGATTGAGAGCTGCCAGG
CCGTCGGGTACAGTTTGCTTCCTGTCCCCGAGATACAGGAGTTTATTGTC
CGGAATGTGCAAGCCGCCGGGGGTGATGTCGAGGGGATGTATGAGAGGAG
TTTGGCGCTGGAGCCGAGGATGGTAGGCGAGGAGAGGATGAATATGGGGC
AGCTGGGGGTCGGGATGATGGGGATGAATATGGGGAGGGGAGGGTATATT
TCTACGGGGAGTCATATGAGTTCGGTGGTTATTGCAAGTATGGCTATGAG
GTAGAACTGCCGCTCCTTAAGCAACTTCGCAACCATGATGTCCCTCATCT
CCGGCCTCGCCACAAGCCCTATCTACCGTCTCCACCGCACCTGGACGCAA
GTGAACCCCAAGACGCGCAAACTCCTCGAAGACATGCAAAGTCTCATGTC
CAGCGAGAAGAACTTCATCAAGTACCGAGATAAGCTACACGGGGCAAGCC
CACCATGCATTCCCTTCCTCGATGTCTTCCAGCTCCCAGCACGCCAGGAA
ATGGTCGACGATGCCGATCGACACGAACGCGGCCCCGTTCTTGAGCCTCG
ACTTCGAGGATGAGGTTGTTTACGAGGACGAGCGACGCCAAAGCATCAAA
CAGGGGACCATCTGTGGGCTGGTCGAGCAACTGACACGCCATGATCGACT
AGACGTCTCGTTCAACGAGACCTTCCTCATGACCTACCCTACATTCGTCT
GCGGCAGGGAACTCTTTGAGATTCTCCTCCAACGACTTAACATGCCCCCT
CCTCCGGGCCTTACCGACTCTGACCTCTCACGATGGACAGAACAGAAGCA
GAAGACCGTCCGCTTCCGCGTCATTAACATACTCAAGACCTGGCTAGAGC
GATACTGGATGGAACCACCCACCGAATCAACTATGGACTTCCTCCGCCAC
ATCCACGCTCAAATCCAACCTCTCACCAACGTTCCCACCTGCTCGCAACT
CCTCACCATCATCGAACACCGCTTGAAGGGCCAAGACATCCTCAAACGAT
ACATGACTCCCCCAAACAGCACAGTGCCCAAACCACTCACCCCGAGGAAC
ATGAAGAAGCTCAAGTTCCTCGACCTCGATCCGATGGAGCTCGCCCGCCA
ACTCACCATCATCGAATCCCGTCTCTTCGCTCGAATCAAACCTACCGAGT
GTCTCAACAAATCATGGCAGAAGAAAGATACCGATAGGCCGCCATCTGTT
CCTGCCTCACGCCGCACCAGCACCAGCACAACCAGTAGCACCAGCTCCAT
CGAACGCACCACCGGCGTCAACGCCACGATTCTACACTCCAACCAGCTCG
CAAACTGGGTAGGAGAGATGATCCTGGCCCAGGATGAGATGAAGAAGCGT
GTCTCGCTGATCAAACAGATTGTCAATATTGCCGATGAACTTACCTAACC
GACCTCACCTTCATTGAAGACGGCATCCCGAGCCACACCCCACCGCCCAA
CGTCATGATAAACTTCAGCAAGCGGGTCAAAGTCGCCGAGATCCTGCGCG
AGATTGAGAGCTGCCAGGCCGTCGGGTACAGTTTGCTTCCTGTCCCCGAG
ATACAGGAGTTTATTGTCCGGAATGTGCAAGCCGCCGGGGGTGATGTCGA
GGGGATGTATGAGAGGAGTTTGGCGCTGGAGCCGAGGATGGTAGGCGAGG
AGAGGATGAATATGGGGCAGCTGGGGGTCGGGATGATGGGGATGAATATG
GGGAGGGGAGGGTATATTTCTACGGGGAGTCATATGAGTTCGGTGGTTAT
TGCAAGTATGGCTATGAGGTAGAACTGCCGCTCCTTAAGCAACTTCGCAA
CCATGATGTCCCTCATCTCCGGCCTCGCCACAAGCCCTATCTACCGTCTC
CACCGCACCTGGACGCAAGTGAACCCCAAGACGCGCAAACTCCTCGAAGA
CATGCAAAGTCTCATGTCCAGCGAGAAGAACTTCATCAAGTACCGAGATA
AGCTACACGGGGCAAGCCCACCATGCATTCCCTTCCTCGATGTCTTCCAG
CTCCCAGCACGCCAGGAAATGGTCGACGATGCCGATCGACACGAACGCGG
CCCCGTTCTTGAGCCTCGACTTCGAGGATGAGGTTGTTTACGAGGACGAG
CGACGCCAAAGCATCAAACAGGGGACCATCTGTGGGCTGGTCGAGCAACT
GACACGCCATGATCGACTAGACGTCTCGTTCAACGAGACCTTCCTCATGA
CCTACCCTACATTCGTCTGCGGCAGGGAACTCTTTGAGATTCTCCTCCAA
CGACTTAACATGCCCCCTCCTCCGGGCCTTACCGACTCTGACCTCTCACG
ATGGACAGAACAGAAGCAGAAGACCGTCCGCTTCCGCGTCATTAACATAC
TCAAGACCTGGCTAGAGCGATACTGGATGGAACCACCCACCGAATCAACT
ATGGACTTCCTCCGCCACATCCACGCTCAAATCCAACCTCTCACCAACGT
TCCCACCTGCTCGCAACTCCTCACCATCATCGAACACCGCTTGAAGGGCC
AAGACATCCTCAAACGATACATGACTCCCCCAAACAGCACAGTGCCCAAA
CCACTCACCCCGAGGAACATGAAGAAGCTCAAGTTCCTCGACCTCGATCC
GATGGAGCTCGCCCGCCAACTCACCATCATCGAATCCCGTCTCTTCGCTC
GAATCAAACCTACCGAGTGTCTCAACAAATCATGGCAGAAGAAAGATACC
GATAGGCCGCCATCTGTTCCTGCCTCACGCCGCACCAGCACCAGCACAAC
CAGTAGCACCAGCTCCATCGAACGCACCACCGGCGTCAACGCCACGATTC
TACACTCCAACCAGCTCGCAAACTGGGTAGGAGAGATGATCCTGGCCCAG
GATGAGATGAAGAAGCGTGTCTCGCTGATCAAACAGATTGTCAATATTGC
CGAT

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

Vocabulary: **Molecular Function**
Term	Definition
GO:0005085	guanyl-nucleotide exchange factor activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
ATCC64974_83340	ATCC64974_83340	Aspergillus niger N402	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
ATCC64974_83340-T1	ATCC64974_83340-T1-protein	Aspergillus niger N402	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
ATCC64974_83340-T1.cds	ATCC64974_83340-T1.cds	Aspergillus niger N402	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
ATCC64974_83340-T1.exon3	ATCC64974_83340-T1.exon3	Aspergillus niger N402	exon
ATCC64974_83340-T1.exon2	ATCC64974_83340-T1.exon2	Aspergillus niger N402	exon
ATCC64974_83340-T1.exon1	ATCC64974_83340-T1.exon1	Aspergillus niger N402	exon

Properties


Property Name	Value
DBxref	InterPro:IPR023578
DBxref	InterPro:IPR019804
DBxref	InterPro:IPR036964
DBxref	InterPro:IPR000651
DBxref	InterPro:IPR001895
DBxref	PFAM:PF00618
DBxref	PFAM:PF00617
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger N402 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
OGUI01000014.1	supercontig	OGUI01000014.1:288261..289916 -

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ATCC64974_83340-T1, ATCC64974_83340-T1 (mRNA) Aspergillus niger N402

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ATCC64974_83340-T1, ATCC64974_83340-T1 (mRNA) Aspergillus niger N402