You are here

Home

ATCC64974_83370-T1, ATCC64974_83370-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_83370-T1
Unique NameATCC64974_83370-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000014.1:297170..299174+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_83370-T1 ID=ATCC64974_83370-T1|Name=ATCC64974_83370-T1|organism=Aspergillus niger N402|type=mRNA|length=2005bp|location=Sequence derived from alignment at OGUI01000014.1:297170..299174+ (Aspergillus niger N402)
ATGGCGGACGCAATCGCGGAAGCCACTGCCAAGCTTCATCTCGACGAGGA
GACCGGTGAGATGGTCTCCAAGGGCGAATTGAAGAAGCGCATGCAGAAGC
GTGCCAAGAAGGCTGCCAAAGCCAGTGCTCCTAAGCCTGCTGCGACCCCT
AAGCCCCAGGGCCCCGCGACACCCAAGCCGGAGGAGGCCCCCATCGACCC
GGACGCGATGTTCAAGCAGGGTTTCCTTGCCAATGTCTACAACGAGCGAC
CCGTTACTCCCTTGACCCGATTCCCCCCCGAGCCTAATGGATACCTGCAC
CTGGGTCACTCCAAGGCCATTGCGATCAACTTCGGCTTCGCGAGACACCA
TGGCGGAAAGACGATCTTGAGATTCGACGACACCAACCCCGAGGCAGAGG
AAGAGAAATACTTCACCGCGATTGAGGATATTATTGAGTGGCTTGGTAAG
GCAGATGTGAGCATGATCATGCGGACATGACTGACCGACCTTGAATAGGA
TTCAAGCCGCATGCCGTTACCCACTCAAGTGACCACTTTGATAAGCTGTA
CGAGCTCGCCGAGAAGATGATCAAGATTGGCCGCGCATATGTCTGCCACT
GCAGCGATGCCGAGATCAAGCTGCAGCGTGGTGGTGAGAAGAATGGCCCC
AGATTCCGCTGCAAGGACGCCGAGCAGGACGTTGAAACCAACTTGCAAAA
ATTCCGTGATATGCGCGACGGAAAGTACGCACCTCAGACGGCGTTCCTGC
GCATGAAGCAGGAGCTTGACAACCCCAACCCGCAGATGTATTCGGATCTG
GCCGCCTACCGTGTCCTTAATGCGGAGCACCATCGGACCAAGGACCAGTG
GAAGATCTACCCTACCTATGACTTTGCCCACTGCCTGTGCGATAGTTTCG
AGGGCATCACCCACAGTCTTTGCACCACTGAATTCGTGCTGTCGCGTGAG
AGCTACGAATGGCTTAACAAGACGTTGGAAGTCTACGAGCCCATGCAGCG
TGAATACAGCCGCATGGAGGTCAGCGGAACGGTCATGAGCAAGAGAAAGC
TCAAGAAGCTTGTTGACGAAGGTTACGTGCGTGGTTGGGACGACCCCCGT
CTGTACACCCTGATCGCGCTGCGTCGCCGTGGTGTTCCTCCGGAGGCCAT
CCTTTCCTTCATCAACGAATTGGGTGTGACAACCTCCAAGTCCGTCATCC
AGATCGCTCGTTTCGAACAGTCTGTTCGTACCTACCTTGAGACCCGTGTC
CCGCGTTTGATGCTGGTCCTTGATCCCGTTCCCGTTGTTATTGAGGATTT
TGAATCCCTTGAGGCCAAGGAACTTGATCTAGATGTACCATTCTCCCCCA
AGGACCCTAAGATGGGCTCCCACCAGCTTCCCTTCACCAAGACCATCTAC
ATTGACCGCTCCGACTTCCGCGAGGAGGATAGCAAGGGATACTTCCGCCT
TGCCCCCGGCAAGAGCGTCGGTCTGTGGAGGGCCCCCTATCCCCTCAAGG
CCACCACTTTCTCGAAGGATGCTGAAGGGAAGATCACGGAGATCCGGGCC
GTTCTGGACCGGTCCGGCACGAAGCCGAAGACGTACATCCACTGGGTCCC
GGACAACTCGCGCAAGGTGGAGGTTCGCATCCACGACCAGCTGTTCAAGT
CGGATGACCCGAACTCTGTGGAGGGCGGCTTCCTGAAGGACATCAACCCC
AACAGCGAGACCATCTACAACGACGCCCTGATTGAGGCCGGCTTTGATGA
GGTGCGGCGCCGGGCTCCTTGGCCCGAGGCTGCAGGAGAGAAGACCAAGA
GTGGACCGGAAAGTGTCCGGTTCCAGGCGATGCGTGTTGCTTACTTCGTG
AGTATCCCAGACTATAGTCCCCCCCCCTTTACTTTATCCGCTTTGTGCTC
CATTGCTAACCGGTATGCCAGGCGGTCGATTCGGATTCTACGGATGACCG
GGTTGTGCTGAACCGCATCGTTTCATTGAAGCAGGATGTGAGCAAGGGTA
ACTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000014.1:297170..299174+

>ATCC64974_83370-T1 ID=ATCC64974_83370-T1|Name=ATCC64974_83370-T1|organism=Aspergillus niger N402|type=CDS|length=5634bp|location=Sequence derived from alignment at OGUI01000014.1:297170..299174+ (Aspergillus niger N402)
ATGGCGGACGCAATCGCGGAAGCCACTGCCAAGCTTCATCTCGACGAGGA
GACCGGTGAGATGGTCTCCAAGGGCGAATTGAAGAAGCGCATGCAGAAGC
GTGCCAAGAAGGCTGCCAAAGCCAGTGCTCCTAAGCCTGCTGCGACCCCT
AAGCCCCAGGGCCCCGCGACACCCAAGCCGGAGGAGGCCCCCATCGACCC
GGACGCGATGTTCAAGCAGGGTTTCCTTGCCAATGTCTACAACGAGCGAC
CCGTTACTCCCTTGACCCGATTCCCCCCCGAGCCTAATGGATACCTGCAC
CTGGGTCACTCCAAGGCCATTGCGATCAACTTCGGCTTCGCGAGACACCA
TGGCGGAAAGACGATCTTGAGATTCGACGACACCAACCCCGAGGCAGAGG
AAGAGAAATACTTCACCGCGATTGAGGATATTATTGAGTGGCTTGGATTC
AAGCCGCATGCCGTTACCCACTCAAGTGACCACTTTGATAAGCTGTACGA
GCTCGCCGAGAAGATGATCAAGATTGGCCGCGCATATGTCTGCCACTGCA
GCGATGCCGAGATCAAGCTGCAGCGTGGTGGTGAGAAGAATGGCCCCAGA
TTCCGCTGCAAGGACGCCGAGCAGGACGTTGAAACCAACTTGCAAAAATT
CCGTGATATGCGCGACGGAAAGTACGCACCTCAGACGGCGTTCCTGCGCA
TGAAGCAGGAGCTTGACAACCCCAACCCGCAGATGTATTCGGATCTGGCC
GCCTACCGTGTCCTTAATGCGGAGCACCATCGGACCAAGGACCAGTGGAA
GATCTACCCTACCTATGACTTTGCCCACTGCCTGTGCGATAGTTTCGAGG
GCATCACCCACAGTCTTTGCACCACTGAATTCGTGCTGTCGCGTGAGAGC
TACGAATGGCTTAACAAGACGTTGGAAGTCTACGAGCCCATGCAGCGTGA
ATACAGCCGCATGGAGGTCAGCGGAACGGTCATGAGCAAGAGAAAGCTCA
AGAAGCTTGTTGACGAAGGTTACGTGCGTGGTTGGGACGACCCCCGTCTG
TACACCCTGATCGCGCTGCGTCGCCGTGGTGTTCCTCCGGAGGCCATCCT
TTCCTTCATCAACGAATTGGGTGTGACAACCTCCAAGTCCGTCATCCAGA
TCGCTCGTTTCGAACAGTCTGTTCGTACCTACCTTGAGACCCGTGTCCCG
CGTTTGATGCTGGTCCTTGATCCCGTTCCCGTTGTTATTGAGGATTTTGA
ATCCCTTGAGGCCAAGGAACTTGATCTAGATGTACCATTCTCCCCCAAGG
ACCCTAAGATGGGCTCCCACCAGCTTCCCTTCACCAAGACCATCTACATT
GACCGCTCCGACTTCCGCGAGGAGGATAGCAAGGGATACTTCCGCCTTGC
CCCCGGCAAGAGCGTCGGTCTGTGGAGGGCCCCCTATCCCCTCAAGGCCA
CCACTTTCTCGAAGGATGCTGAAGGGAAGATCACGGAGATCCGGGCCGTT
CTGGACCGGTCCGGCACGAAGCCGAAGACGTACATCCACTGGGTCCCGGA
CAACTCGCGCAAGGTGGAGGTTCGCATCCACGACCAGCTGTTCAAGTCGG
ATGACCCGAACTCTGTGGAGGGCGGCTTCCTGAAGGACATCAACCCCAAC
AGCGAGACCATCTACAACGACGCCCTGATTGAGGCCGGCTTTGATGAGGT
GCGGCGCCGGGCTCCTTGGCCCGAGGCTGCAGGAGAGAAGACCAAGAGTG
GACCGGAAAGTGTCCGGTTCCAGGCGATGCGTGTTGCTTACTTCGCGGTC
GATTCGGATTCTACGGATGACCGGGTTGTGCTGAACCGCATCGTTTCATT
GAAGCAGGATGTGAGCAAGGGTAACTAAATGGCGGACGCAATCGCGGAAG
CCACTGCCAAGCTTCATCTCGACGAGGAGACCGGTGAGATGGTCTCCAAG
GGCGAATTGAAGAAGCGCATGCAGAAGCGTGCCAAGAAGGCTGCCAAAGC
CAGTGCTCCTAAGCCTGCTGCGACCCCTAAGCCCCAGGGCCCCGCGACAC
CCAAGCCGGAGGAGGCCCCCATCGACCCGGACGCGATGTTCAAGCAGGGT
TTCCTTGCCAATGTCTACAACGAGCGACCCGTTACTCCCTTGACCCGATT
CCCCCCCGAGCCTAATGGATACCTGCACCTGGGTCACTCCAAGGCCATTG
CGATCAACTTCGGCTTCGCGAGACACCATGGCGGAAAGACGATCTTGAGA
TTCGACGACACCAACCCCGAGGCAGAGGAAGAGAAATACTTCACCGCGAT
TGAGGATATTATTGAGTGGCTTGGATTCAAGCCGCATGCCGTTACCCACT
CAAGTGACCACTTTGATAAGCTGTACGAGCTCGCCGAGAAGATGATCAAG
ATTGGCCGCGCATATGTCTGCCACTGCAGCGATGCCGAGATCAAGCTGCA
GCGTGGTGGTGAGAAGAATGGCCCCAGATTCCGCTGCAAGGACGCCGAGC
AGGACGTTGAAACCAACTTGCAAAAATTCCGTGATATGCGCGACGGAAAG
TACGCACCTCAGACGGCGTTCCTGCGCATGAAGCAGGAGCTTGACAACCC
CAACCCGCAGATGTATTCGGATCTGGCCGCCTACCGTGTCCTTAATGCGG
AGCACCATCGGACCAAGGACCAGTGGAAGATCTACCCTACCTATGACTTT
GCCCACTGCCTGTGCGATAGTTTCGAGGGCATCACCCACAGTCTTTGCAC
CACTGAATTCGTGCTGTCGCGTGAGAGCTACGAATGGCTTAACAAGACGT
TGGAAGTCTACGAGCCCATGCAGCGTGAATACAGCCGCATGGAGGTCAGC
GGAACGGTCATGAGCAAGAGAAAGCTCAAGAAGCTTGTTGACGAAGGTTA
CGTGCGTGGTTGGGACGACCCCCGTCTGTACACCCTGATCGCGCTGCGTC
GCCGTGGTGTTCCTCCGGAGGCCATCCTTTCCTTCATCAACGAATTGGGT
GTGACAACCTCCAAGTCCGTCATCCAGATCGCTCGTTTCGAACAGTCTGT
TCGTACCTACCTTGAGACCCGTGTCCCGCGTTTGATGCTGGTCCTTGATC
CCGTTCCCGTTGTTATTGAGGATTTTGAATCCCTTGAGGCCAAGGAACTT
GATCTAGATGTACCATTCTCCCCCAAGGACCCTAAGATGGGCTCCCACCA
GCTTCCCTTCACCAAGACCATCTACATTGACCGCTCCGACTTCCGCGAGG
AGGATAGCAAGGGATACTTCCGCCTTGCCCCCGGCAAGAGCGTCGGTCTG
TGGAGGGCCCCCTATCCCCTCAAGGCCACCACTTTCTCGAAGGATGCTGA
AGGGAAGATCACGGAGATCCGGGCCGTTCTGGACCGGTCCGGCACGAAGC
CGAAGACGTACATCCACTGGGTCCCGGACAACTCGCGCAAGGTGGAGGTT
CGCATCCACGACCAGCTGTTCAAGTCGGATGACCCGAACTCTGTGGAGGG
CGGCTTCCTGAAGGACATCAACCCCAACAGCGAGACCATCTACAACGACG
CCCTGATTGAGGCCGGCTTTGATGAGGTGCGGCGCCGGGCTCCTTGGCCC
GAGGCTGCAGGAGAGAAGACCAAGAGTGGACCGGAAAGTGTCCGGTTCCA
GGCGATGCGTGTTGCTTACTTCGCGGTCGATTCGGATTCTACGGATGACC
GGGTTGTGCTGAACCGCATCGTTTCATTGAAGCAGGATGTGAGCAAGGGT
AACTAAATGGCGGACGCAATCGCGGAAGCCACTGCCAAGCTTCATCTCGA
CGAGGAGACCGGTGAGATGGTCTCCAAGGGCGAATTGAAGAAGCGCATGC
AGAAGCGTGCCAAGAAGGCTGCCAAAGCCAGTGCTCCTAAGCCTGCTGCG
ACCCCTAAGCCCCAGGGCCCCGCGACACCCAAGCCGGAGGAGGCCCCCAT
CGACCCGGACGCGATGTTCAAGCAGGGTTTCCTTGCCAATGTCTACAACG
AGCGACCCGTTACTCCCTTGACCCGATTCCCCCCCGAGCCTAATGGATAC
CTGCACCTGGGTCACTCCAAGGCCATTGCGATCAACTTCGGCTTCGCGAG
ACACCATGGCGGAAAGACGATCTTGAGATTCGACGACACCAACCCCGAGG
CAGAGGAAGAGAAATACTTCACCGCGATTGAGGATATTATTGAGTGGCTT
GGATTCAAGCCGCATGCCGTTACCCACTCAAGTGACCACTTTGATAAGCT
GTACGAGCTCGCCGAGAAGATGATCAAGATTGGCCGCGCATATGTCTGCC
ACTGCAGCGATGCCGAGATCAAGCTGCAGCGTGGTGGTGAGAAGAATGGC
CCCAGATTCCGCTGCAAGGACGCCGAGCAGGACGTTGAAACCAACTTGCA
AAAATTCCGTGATATGCGCGACGGAAAGTACGCACCTCAGACGGCGTTCC
TGCGCATGAAGCAGGAGCTTGACAACCCCAACCCGCAGATGTATTCGGAT
CTGGCCGCCTACCGTGTCCTTAATGCGGAGCACCATCGGACCAAGGACCA
GTGGAAGATCTACCCTACCTATGACTTTGCCCACTGCCTGTGCGATAGTT
TCGAGGGCATCACCCACAGTCTTTGCACCACTGAATTCGTGCTGTCGCGT
GAGAGCTACGAATGGCTTAACAAGACGTTGGAAGTCTACGAGCCCATGCA
GCGTGAATACAGCCGCATGGAGGTCAGCGGAACGGTCATGAGCAAGAGAA
AGCTCAAGAAGCTTGTTGACGAAGGTTACGTGCGTGGTTGGGACGACCCC
CGTCTGTACACCCTGATCGCGCTGCGTCGCCGTGGTGTTCCTCCGGAGGC
CATCCTTTCCTTCATCAACGAATTGGGTGTGACAACCTCCAAGTCCGTCA
TCCAGATCGCTCGTTTCGAACAGTCTGTTCGTACCTACCTTGAGACCCGT
GTCCCGCGTTTGATGCTGGTCCTTGATCCCGTTCCCGTTGTTATTGAGGA
TTTTGAATCCCTTGAGGCCAAGGAACTTGATCTAGATGTACCATTCTCCC
CCAAGGACCCTAAGATGGGCTCCCACCAGCTTCCCTTCACCAAGACCATC
TACATTGACCGCTCCGACTTCCGCGAGGAGGATAGCAAGGGATACTTCCG
CCTTGCCCCCGGCAAGAGCGTCGGTCTGTGGAGGGCCCCCTATCCCCTCA
AGGCCACCACTTTCTCGAAGGATGCTGAAGGGAAGATCACGGAGATCCGG
GCCGTTCTGGACCGGTCCGGCACGAAGCCGAAGACGTACATCCACTGGGT
CCCGGACAACTCGCGCAAGGTGGAGGTTCGCATCCACGACCAGCTGTTCA
AGTCGGATGACCCGAACTCTGTGGAGGGCGGCTTCCTGAAGGACATCAAC
CCCAACAGCGAGACCATCTACAACGACGCCCTGATTGAGGCCGGCTTTGA
TGAGGTGCGGCGCCGGGCTCCTTGGCCCGAGGCTGCAGGAGAGAAGACCA
AGAGTGGACCGGAAAGTGTCCGGTTCCAGGCGATGCGTGTTGCTTACTTC
GCGGTCGATTCGGATTCTACGGATGACCGGGTTGTGCTGAACCGCATCGT
TTCATTGAAGCAGGATGTGAGCAAGGGTAACTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0004819glutamine-tRNA ligase activity
GO:0000166nucleotide binding
GO:0004812aminoacyl-tRNA ligase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006425glutaminyl-tRNA aminoacylation
GO:0006418tRNA aminoacylation for protein translation
GO:0043039tRNA aminoacylation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_83370ATCC64974_83370Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_83370-T1.exon1ATCC64974_83370-T1.exon1Aspergillus niger N402exon
ATCC64974_83370-T1.exon2ATCC64974_83370-T1.exon2Aspergillus niger N402exon
ATCC64974_83370-T1.exon3ATCC64974_83370-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_83370-T1.cdsATCC64974_83370-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_83370-T1ATCC64974_83370-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09260WYQ
DBxrefInterPro:IPR011035
DBxrefInterPro:IPR001412
DBxrefInterPro:IPR004514
DBxrefInterPro:IPR020058
DBxrefInterPro:IPR014729
DBxrefInterPro:IPR020056
DBxrefInterPro:IPR020059
DBxrefInterPro:IPR000924
DBxrefPFAM:PF03950
DBxrefPFAM:PF00749
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000014.1supercontigOGUI01000014.1:297170..299174 +
Powered by Drupal