You are here

Home

ATCC64974_83650-T1, ATCC64974_83650-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_83650-T1
Unique NameATCC64974_83650-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000014.1:372810..374312-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_83650-T1 ID=ATCC64974_83650-T1|Name=ATCC64974_83650-T1|organism=Aspergillus niger N402|type=mRNA|length=1503bp|location=Sequence derived from alignment at OGUI01000014.1:372810..374312- (Aspergillus niger N402)
ATGCGTTTCAATGAACTTCAAGACCAGTCAGACAAAAGTCTGTCTGAGAT
CATGTCAGAAGCGAGGTCATTATTGACTCAACTTCTCACAACCGATTCTC
CAGCCCCATCAGACCCCATCTTTCGAAAGCTCGATACCCATGAGATACAA
GACATGCAAGATAAAGTCATGCCGGACGATCATCCTCGAGATCTCGCTTC
CTCCATTCAACAAGCCATGACACTCTTTAATTACCAAATGCGCCTCAGTC
ACCCACATTGCTTTGCTTATATACCAGTTTGCCCAAACCCTATTGCCCGT
CTGGGTGATGCCCTCACTTCCATCTGGAATGTAAATGTTACCACCTGGGA
TACGAGCTCTGGTCCGAGTGCGGTTGAAAAGGCCATGATCCTCTGGCTGG
GTGCCCAGCTGGGGCTGCCAGATTCAGTTGGAGGGTGCTTTGTTTCCGGT
GGTTCGATGGCAAACATGACAGCCATAATTGCAGCCCGGGATGAGAAACT
CCAACCCTCGCAGCGAGCAAATGCCACTATCTACATGTCCGACCAAACAC
ACCTCTCCGTTATGAAAGCCCTACATATCGCCGGCTTCATGGACTATCAG
GTCCAGAAGATACCAACTGATGATGACTTCCACATAGATGTGGATATCTT
ACGCCAAGTCATTACTGCGGATCGTCAACTCGGACGCGTTCCTTTCCTTC
TTGTCGCCAATTGCGGGAGCACCAACACCGGCAGTATCGATCCTCTCCAT
GAGTTAGCTGACATCGCACGAGATGAAGGGCTATGGCTCCATGTAGACGG
TGCATATGGTGCATCCATCGCACTATCCGACAAGCATCGCCACCTGACTG
ATGGCATCGATCGGGCGGACAGCGCTTCCTGGGATGGCCACAAGTGGCTC
TTCCAGACATATAGTTGCGGAATCGTGCTCACGCGGCACGTCAACTCTCT
CAGACGCAGCTTCTCCTTTGATGCCGAATATATTAATACTATATTGGCAC
CGCAGGACACGATTAATTTCAATAAACTCAGTCCAGAGCTCAGTCGCCCC
GCGCGTGCGATGTCTCTTTGGCTCACTCTCAAAGTCTTAGGTAGTCGTCG
TGTCGGTGAGATGATTGATCGGGGGTTTCTTCTTGCCCGTCAAGCGGACC
GTAGTATCCGGCAGTATAAGAACTGGATCATTCCGGCGCCAACAGTTGCT
AGCATTGTGGTTTTCCGCTATGCACCTCGCGGGTTCAGCGAAGAGGAGCT
AGACTCACTGAACAGTGCTATTTCACAACGGCTTTTGACGGAGAATATTG
CTGCCATACTAACTACCCAAATTCGGGGACGGAATACTCTTCGACTGTGT
GCTATGAATCCTGCCGTGCAGCCCGAAGATATCAGTGATATAATACGTCA
AGTGGATAAGGTTGCTCGAGCCGAGGCGCCTAAGGTCCAAAAGACATATC
CAAGGATGCCTAATATTCTGTGTGGTCATCTGCCAATTTGTCGTGGGTGT
TGA
back to top

Coding sequence (CDS) from alignment at OGUI01000014.1:372810..374312-

>ATCC64974_83650-T1 ID=ATCC64974_83650-T1|Name=ATCC64974_83650-T1|organism=Aspergillus niger N402|type=CDS|length=1503bp|location=Sequence derived from alignment at OGUI01000014.1:372810..374312- (Aspergillus niger N402)
ATGCGTTTCAATGAACTTCAAGACCAGTCAGACAAAAGTCTGTCTGAGAT
CATGTCAGAAGCGAGGTCATTATTGACTCAACTTCTCACAACCGATTCTC
CAGCCCCATCAGACCCCATCTTTCGAAAGCTCGATACCCATGAGATACAA
GACATGCAAGATAAAGTCATGCCGGACGATCATCCTCGAGATCTCGCTTC
CTCCATTCAACAAGCCATGACACTCTTTAATTACCAAATGCGCCTCAGTC
ACCCACATTGCTTTGCTTATATACCAGTTTGCCCAAACCCTATTGCCCGT
CTGGGTGATGCCCTCACTTCCATCTGGAATGTAAATGTTACCACCTGGGA
TACGAGCTCTGGTCCGAGTGCGGTTGAAAAGGCCATGATCCTCTGGCTGG
GTGCCCAGCTGGGGCTGCCAGATTCAGTTGGAGGGTGCTTTGTTTCCGGT
GGTTCGATGGCAAACATGACAGCCATAATTGCAGCCCGGGATGAGAAACT
CCAACCCTCGCAGCGAGCAAATGCCACTATCTACATGTCCGACCAAACAC
ACCTCTCCGTTATGAAAGCCCTACATATCGCCGGCTTCATGGACTATCAG
GTCCAGAAGATACCAACTGATGATGACTTCCACATAGATGTGGATATCTT
ACGCCAAGTCATTACTGCGGATCGTCAACTCGGACGCGTTCCTTTCCTTC
TTGTCGCCAATTGCGGGAGCACCAACACCGGCAGTATCGATCCTCTCCAT
GAGTTAGCTGACATCGCACGAGATGAAGGGCTATGGCTCCATGTAGACGG
TGCATATGGTGCATCCATCGCACTATCCGACAAGCATCGCCACCTGACTG
ATGGCATCGATCGGGCGGACAGCGCTTCCTGGGATGGCCACAAGTGGCTC
TTCCAGACATATAGTTGCGGAATCGTGCTCACGCGGCACGTCAACTCTCT
CAGACGCAGCTTCTCCTTTGATGCCGAATATATTAATACTATATTGGCAC
CGCAGGACACGATTAATTTCAATAAACTCAGTCCAGAGCTCAGTCGCCCC
GCGCGTGCGATGTCTCTTTGGCTCACTCTCAAAGTCTTAGGTAGTCGTCG
TGTCGGTGAGATGATTGATCGGGGGTTTCTTCTTGCCCGTCAAGCGGACC
GTAGTATCCGGCAGTATAAGAACTGGATCATTCCGGCGCCAACAGTTGCT
AGCATTGTGGTTTTCCGCTATGCACCTCGCGGGTTCAGCGAAGAGGAGCT
AGACTCACTGAACAGTGCTATTTCACAACGGCTTTTGACGGAGAATATTG
CTGCCATACTAACTACCCAAATTCGGGGACGGAATACTCTTCGACTGTGT
GCTATGAATCCTGCCGTGCAGCCCGAAGATATCAGTGATATAATACGTCA
AGTGGATAAGGTTGCTCGAGCCGAGGCGCCTAAGGTCCAAAAGACATATC
CAAGGATGCCTAATATTCTGTGTGGTCATCTGCCAATTTGTCGTGGGTGT
TGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0030170pyridoxal phosphate binding
GO:0003824catalytic activity
GO:0016831carboxy-lyase activity
Vocabulary: Biological Process
TermDefinition
GO:0019752carboxylic acid metabolic process
GO:0006520cellular amino acid metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_83650ATCC64974_83650Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_83650-T1.cdsATCC64974_83650-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_83650-T1.exon1ATCC64974_83650-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_83650-T1ATCC64974_83650-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR015424
DBxrefInterPro:IPR002129
DBxrefInterPro:IPR015421
DBxrefInterPro:IPR010977
DBxrefPFAM:PF00282
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000014.1supercontigOGUI01000014.1:372810..374312 -
Powered by Drupal