You are here

Home

ATCC64974_84370-T1, ATCC64974_84370-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_84370-T1
Unique NameATCC64974_84370-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000014.1:580797..582437-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_84370-T1 ID=ATCC64974_84370-T1|Name=ATCC64974_84370-T1|organism=Aspergillus niger N402|type=mRNA|length=1641bp|location=Sequence derived from alignment at OGUI01000014.1:580797..582437- (Aspergillus niger N402)
ATGAGCAACTCGTCGCCTCAATATGCTTCCCAAAAGCGGAACAACGCCCC
CGAGGATTTCGAGGACAGTCAAACGGGATTGGAAATACCTTCGACCCCTT
CAACACCCATAAAAGGAGTCAAGCAGGAGCTACAGGCAAATGGGTCAAAA
TCCAGACGGAAGAGGAGAGCTTTGGATAATGCCACCAACAATGCTGCACT
GACATTGTCTCAACCATCGCAGCACAGTACACCAATGGATCATCCACCAA
AGCGCAAGAAGGTCCGCGAGTCCATGGAAAGCCAGATACAGAGTCGCAAA
ACAGATGTGGCCAAGGAAAACCTCGACAATGTACTCCTGGAGAACGCATC
TTCAGCTTCACTCGCTCTAGAACCAGAAAATAAGGACAAAGAGGGAGGGT
CTGCCCAGGAGGAATTAGAAGCAAACTTGACCACAGCGTCAAAACAATCT
ATCGAGAAATATAAAGGCTTGGTGGACTTCAAAAAGGGAAAGCGCGGTCT
GGATGCCAACAAAGGGAAAGGAGACAGATCTGGTTTCTTTACACCGGAGG
AAGTAAAGGGATTGGAATCATTCAAACTAGATTTCTGCACCACCCACGGC
ATGTCGAGCGATACGTTCGACCTTATGGTGCAGCATTCAGAAAGGGACAA
GTCAAACCCCTTCCCTTGTCCTACGGAAATCACCACAAAACCGGCTTTCT
GGAAAAAGGTCTATGAGATTATTCCGGGTCGCAACAAGAGATCGGTTTAT
CGGTTCATGAGACGACACTTTCAATGTACAACTCAGAAGCCACATTATTG
GACTGCCGAACAAGATGACGAACTCATCTTACTTCATGAACGCCACGGGC
CCAAGTGGGCTCACATCGCCAAGATGATTGGTAGAAGCGATGACGACGTG
ATACAGCGATGGAGGAATCACCTCGAACATCGCCAGACGATGAATCGAGG
GCCTTGGTCTGAATGGGAAGTATCTGCACTACTAGAGCATCTACAGGCCT
GGTGGACCCACATGAAGAAGTTAGGCCATGATGTTGGCCGGGATATCTAT
GAGATAGATGAATCCAAAATCTCTTGGGGAAACATCAGCAACAGCATGGA
CAACTGCCGTTCCAGGCAGCAGTGTGGAGACAAATTTCGCAAGATCAGGC
GCAAGGTCTTGACTCGGCGTAGCATGGGAAACCCGGATGCTTTCTACGAC
CCCGTTGTGGAGGCAAAACCACCAAAGCGCCGAGGTAAATCGAGGTCGAT
TACGTCTTCTCAGAGCCAATCAAACAAGCACTTTAAAAGTTCTGAATACG
TGGAGTCGGATGACGAGTCAGGCGAAGAGGAGACCGAGACTGACAATACT
TCCAGTATGGATCAATCAACGTCCAAGTTTGATGACAATTCATCTTCGTC
TTCGAAGTCGCTGAAATCTGCACCCAAGAACGTCAATCATTCAGTTCATT
CCTTGGAAGACAGCGATAGGTCCGATCCGGACATTTCCATCTCCGGGTCA
GAAGACTCAAATTCCGAGTCGAACCCAGGGAAATCAGGTTCTGATAATGA
TACCGGTAGTCTTCGTTCGGTACAACCGTCTGGCAAGAAGCAGTCTTCGG
GACACAAGGACACTGGAAGCCACAAAAGACAACGGCGGTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000014.1:580797..582437-

>ATCC64974_84370-T1 ID=ATCC64974_84370-T1|Name=ATCC64974_84370-T1|organism=Aspergillus niger N402|type=CDS|length=1641bp|location=Sequence derived from alignment at OGUI01000014.1:580797..582437- (Aspergillus niger N402)
ATGAGCAACTCGTCGCCTCAATATGCTTCCCAAAAGCGGAACAACGCCCC
CGAGGATTTCGAGGACAGTCAAACGGGATTGGAAATACCTTCGACCCCTT
CAACACCCATAAAAGGAGTCAAGCAGGAGCTACAGGCAAATGGGTCAAAA
TCCAGACGGAAGAGGAGAGCTTTGGATAATGCCACCAACAATGCTGCACT
GACATTGTCTCAACCATCGCAGCACAGTACACCAATGGATCATCCACCAA
AGCGCAAGAAGGTCCGCGAGTCCATGGAAAGCCAGATACAGAGTCGCAAA
ACAGATGTGGCCAAGGAAAACCTCGACAATGTACTCCTGGAGAACGCATC
TTCAGCTTCACTCGCTCTAGAACCAGAAAATAAGGACAAAGAGGGAGGGT
CTGCCCAGGAGGAATTAGAAGCAAACTTGACCACAGCGTCAAAACAATCT
ATCGAGAAATATAAAGGCTTGGTGGACTTCAAAAAGGGAAAGCGCGGTCT
GGATGCCAACAAAGGGAAAGGAGACAGATCTGGTTTCTTTACACCGGAGG
AAGTAAAGGGATTGGAATCATTCAAACTAGATTTCTGCACCACCCACGGC
ATGTCGAGCGATACGTTCGACCTTATGGTGCAGCATTCAGAAAGGGACAA
GTCAAACCCCTTCCCTTGTCCTACGGAAATCACCACAAAACCGGCTTTCT
GGAAAAAGGTCTATGAGATTATTCCGGGTCGCAACAAGAGATCGGTTTAT
CGGTTCATGAGACGACACTTTCAATGTACAACTCAGAAGCCACATTATTG
GACTGCCGAACAAGATGACGAACTCATCTTACTTCATGAACGCCACGGGC
CCAAGTGGGCTCACATCGCCAAGATGATTGGTAGAAGCGATGACGACGTG
ATACAGCGATGGAGGAATCACCTCGAACATCGCCAGACGATGAATCGAGG
GCCTTGGTCTGAATGGGAAGTATCTGCACTACTAGAGCATCTACAGGCCT
GGTGGACCCACATGAAGAAGTTAGGCCATGATGTTGGCCGGGATATCTAT
GAGATAGATGAATCCAAAATCTCTTGGGGAAACATCAGCAACAGCATGGA
CAACTGCCGTTCCAGGCAGCAGTGTGGAGACAAATTTCGCAAGATCAGGC
GCAAGGTCTTGACTCGGCGTAGCATGGGAAACCCGGATGCTTTCTACGAC
CCCGTTGTGGAGGCAAAACCACCAAAGCGCCGAGGTAAATCGAGGTCGAT
TACGTCTTCTCAGAGCCAATCAAACAAGCACTTTAAAAGTTCTGAATACG
TGGAGTCGGATGACGAGTCAGGCGAAGAGGAGACCGAGACTGACAATACT
TCCAGTATGGATCAATCAACGTCCAAGTTTGATGACAATTCATCTTCGTC
TTCGAAGTCGCTGAAATCTGCACCCAAGAACGTCAATCATTCAGTTCATT
CCTTGGAAGACAGCGATAGGTCCGATCCGGACATTTCCATCTCCGGGTCA
GAAGACTCAAATTCCGAGTCGAACCCAGGGAAATCAGGTTCTGATAATGA
TACCGGTAGTCTTCGTTCGGTACAACCGTCTGGCAAGAAGCAGTCTTCGG
GACACAAGGACACTGGAAGCCACAAAAGACAACGGCGGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_84370ATCC64974_84370Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_84370-T1.cdsATCC64974_84370-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_84370-T1.exon1ATCC64974_84370-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_84370-T1ATCC64974_84370-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR009057
DBxrefInterPro:IPR017930
DBxrefInterPro:IPR017877
DBxrefInterPro:IPR001005
DBxrefPFAM:PF13921
DBxrefPFAM:PF00249
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000014.1supercontigOGUI01000014.1:580797..582437 -
Powered by Drupal