You are here

Home

ATCC64974_8440-T1, ATCC64974_8440-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_8440-T1
Unique NameATCC64974_8440-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000002.1:307309..308252+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_8440-T1 ID=ATCC64974_8440-T1|Name=ATCC64974_8440-T1|organism=Aspergillus niger N402|type=mRNA|length=944bp|location=Sequence derived from alignment at OGUI01000002.1:307309..308252+ (Aspergillus niger N402)
ATGTCTTCCGAGCAGACGTGAGTCGATTCCACTTCCCATTCCTCCCCTCC
TTTTACCCCTCTACCCCTCCATTGCTCTTTTCTCTCTCGGTCTCTCTCAG
TCAGCCTCTCTGGAGGTCCTTAGGGAGTCCTTTTTTGGATCCTCGTCAAC
CCCTCATTGCATTAATGAAAGCTAACCAATTGATATAGCTTCATTGCCAT
CAAGCCCGACGGTGTCCAGGTATGACTGATTCAAAGCCTCGACTCATCGC
TCTGTGATGCATCTGCGGCATCTCCGGAATTAAACCCGTACTGACCCTGC
CCTACCAGCGCGGACTCGTTGGCCCCATCATCTCTCGCTTCGAGAACCGT
GGGTTCGTACTCCCCATCCATTGCAATTCAAAAAACATAGATACTGACGT
TATCCCAGCTTCAAGCTCGTTGCTCTGAAGCTCTGCTCCCCCGGCCGTGA
GCACCTCGAGAAGCACTACGCTGACCTCAAGGAGAAGCCCTTCTTCCCCG
GTCTCGTCTCCTGTATGTAGCTCCCAGATGTTGCACATTGACGCATACCA
GCATACTAATCTTGCCTGTTAGACATGCTCTCTGGCCCCATCTGCGCCAT
GGTCTGGGAGGGCCGTGACGCCGTCAAGACCGGCCGCAGTAAGTTCCTCT
GCTAAAACTTGCATCTATCGTCGTATACTGATCATTTGAAAGCCATCCTC
GGTGCCACCAACCCCCTTGCCTCCGCCCCCGGCACCATCCGTGGTGACTA
CGCCATCGTAAGGACCCTGAACCCATCATGATCGAGACATCTCACTCACA
GTTGAATAGGACGTCGGCCGCAACGTCTGCCACGGTTCCGACTCCGTCGA
GAACGCCCAGAAGGAGATTGCCCTCTGGTTCTCCCCCAGCGAGCTCCAGC
AGTGGAAGCACTCCCAGTTCGACTGGATCTACGAGAAGGCCTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000002.1:307309..308252+

>ATCC64974_8440-T1 ID=ATCC64974_8440-T1|Name=ATCC64974_8440-T1|organism=Aspergillus niger N402|type=CDS|length=3234bp|location=Sequence derived from alignment at OGUI01000002.1:307309..308252+ (Aspergillus niger N402)
ATGTCTTCCGAGCAGACCTTCATTGCCATCAAGCCCGACGGTGTCCAGCG
CGGACTCGTTGGCCCCATCATCTCTCGCTTCGAGAACCGTGGCTTCAAGC
TCGTTGCTCTGAAGCTCTGCTCCCCCGGCCGTGAGCACCTCGAGAAGCAC
TACGCTGACCTCAAGGAGAAGCCCTTCTTCCCCGGTCTCGTCTCCTACAT
GCTCTCTGGCCCCATCTGCGCCATGGTCTGGGAGGGCCGTGACGCCGTCA
AGACCGGCCGCACCATCCTCGGTGCCACCAACCCCCTTGCCTCCGCCCCC
GGCACCATCCGTGGTGACTACGCCATCGACGTCGGCCGCAACGTCTGCCA
CGGTTCCGACTCCGTCGAGAACGCCCAGAAGGAGATTGCCCTCTGGTTCT
CCCCCAGCGAGCTCCAGCAGTGGAAGCACTCCCAGTTCGACTGGATCTAC
GAGAAGGCCTAAATGTCTTCCGAGCAGACCTTCATTGCCATCAAGCCCGA
CGGTGTCCAGCGCGGACTCGTTGGCCCCATCATCTCTCGCTTCGAGAACC
GTGGCTTCAAGCTCGTTGCTCTGAAGCTCTGCTCCCCCGGCCGTGAGCAC
CTCGAGAAGCACTACGCTGACCTCAAGGAGAAGCCCTTCTTCCCCGGTCT
CGTCTCCTACATGCTCTCTGGCCCCATCTGCGCCATGGTCTGGGAGGGCC
GTGACGCCGTCAAGACCGGCCGCACCATCCTCGGTGCCACCAACCCCCTT
GCCTCCGCCCCCGGCACCATCCGTGGTGACTACGCCATCGACGTCGGCCG
CAACGTCTGCCACGGTTCCGACTCCGTCGAGAACGCCCAGAAGGAGATTG
CCCTCTGGTTCTCCCCCAGCGAGCTCCAGCAGTGGAAGCACTCCCAGTTC
GACTGGATCTACGAGAAGGCCTAAATGTCTTCCGAGCAGACCTTCATTGC
CATCAAGCCCGACGGTGTCCAGCGCGGACTCGTTGGCCCCATCATCTCTC
GCTTCGAGAACCGTGGCTTCAAGCTCGTTGCTCTGAAGCTCTGCTCCCCC
GGCCGTGAGCACCTCGAGAAGCACTACGCTGACCTCAAGGAGAAGCCCTT
CTTCCCCGGTCTCGTCTCCTACATGCTCTCTGGCCCCATCTGCGCCATGG
TCTGGGAGGGCCGTGACGCCGTCAAGACCGGCCGCACCATCCTCGGTGCC
ACCAACCCCCTTGCCTCCGCCCCCGGCACCATCCGTGGTGACTACGCCAT
CGACGTCGGCCGCAACGTCTGCCACGGTTCCGACTCCGTCGAGAACGCCC
AGAAGGAGATTGCCCTCTGGTTCTCCCCCAGCGAGCTCCAGCAGTGGAAG
CACTCCCAGTTCGACTGGATCTACGAGAAGGCCTAAATGTCTTCCGAGCA
GACCTTCATTGCCATCAAGCCCGACGGTGTCCAGCGCGGACTCGTTGGCC
CCATCATCTCTCGCTTCGAGAACCGTGGCTTCAAGCTCGTTGCTCTGAAG
CTCTGCTCCCCCGGCCGTGAGCACCTCGAGAAGCACTACGCTGACCTCAA
GGAGAAGCCCTTCTTCCCCGGTCTCGTCTCCTACATGCTCTCTGGCCCCA
TCTGCGCCATGGTCTGGGAGGGCCGTGACGCCGTCAAGACCGGCCGCACC
ATCCTCGGTGCCACCAACCCCCTTGCCTCCGCCCCCGGCACCATCCGTGG
TGACTACGCCATCGACGTCGGCCGCAACGTCTGCCACGGTTCCGACTCCG
TCGAGAACGCCCAGAAGGAGATTGCCCTCTGGTTCTCCCCCAGCGAGCTC
CAGCAGTGGAAGCACTCCCAGTTCGACTGGATCTACGAGAAGGCCTAAAT
GTCTTCCGAGCAGACCTTCATTGCCATCAAGCCCGACGGTGTCCAGCGCG
GACTCGTTGGCCCCATCATCTCTCGCTTCGAGAACCGTGGCTTCAAGCTC
GTTGCTCTGAAGCTCTGCTCCCCCGGCCGTGAGCACCTCGAGAAGCACTA
CGCTGACCTCAAGGAGAAGCCCTTCTTCCCCGGTCTCGTCTCCTACATGC
TCTCTGGCCCCATCTGCGCCATGGTCTGGGAGGGCCGTGACGCCGTCAAG
ACCGGCCGCACCATCCTCGGTGCCACCAACCCCCTTGCCTCCGCCCCCGG
CACCATCCGTGGTGACTACGCCATCGACGTCGGCCGCAACGTCTGCCACG
GTTCCGACTCCGTCGAGAACGCCCAGAAGGAGATTGCCCTCTGGTTCTCC
CCCAGCGAGCTCCAGCAGTGGAAGCACTCCCAGTTCGACTGGATCTACGA
GAAGGCCTAAATGTCTTCCGAGCAGACCTTCATTGCCATCAAGCCCGACG
GTGTCCAGCGCGGACTCGTTGGCCCCATCATCTCTCGCTTCGAGAACCGT
GGCTTCAAGCTCGTTGCTCTGAAGCTCTGCTCCCCCGGCCGTGAGCACCT
CGAGAAGCACTACGCTGACCTCAAGGAGAAGCCCTTCTTCCCCGGTCTCG
TCTCCTACATGCTCTCTGGCCCCATCTGCGCCATGGTCTGGGAGGGCCGT
GACGCCGTCAAGACCGGCCGCACCATCCTCGGTGCCACCAACCCCCTTGC
CTCCGCCCCCGGCACCATCCGTGGTGACTACGCCATCGACGTCGGCCGCA
ACGTCTGCCACGGTTCCGACTCCGTCGAGAACGCCCAGAAGGAGATTGCC
CTCTGGTTCTCCCCCAGCGAGCTCCAGCAGTGGAAGCACTCCCAGTTCGA
CTGGATCTACGAGAAGGCCTAAATGTCTTCCGAGCAGACCTTCATTGCCA
TCAAGCCCGACGGTGTCCAGCGCGGACTCGTTGGCCCCATCATCTCTCGC
TTCGAGAACCGTGGCTTCAAGCTCGTTGCTCTGAAGCTCTGCTCCCCCGG
CCGTGAGCACCTCGAGAAGCACTACGCTGACCTCAAGGAGAAGCCCTTCT
TCCCCGGTCTCGTCTCCTACATGCTCTCTGGCCCCATCTGCGCCATGGTC
TGGGAGGGCCGTGACGCCGTCAAGACCGGCCGCACCATCCTCGGTGCCAC
CAACCCCCTTGCCTCCGCCCCCGGCACCATCCGTGGTGACTACGCCATCG
ACGTCGGCCGCAACGTCTGCCACGGTTCCGACTCCGTCGAGAACGCCCAG
AAGGAGATTGCCCTCTGGTTCTCCCCCAGCGAGCTCCAGCAGTGGAAGCA
CTCCCAGTTCGACTGGATCTACGAGAAGGCCTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004550nucleoside diphosphate kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0006183GTP biosynthetic process
GO:0006165nucleoside diphosphate phosphorylation
GO:0006241CTP biosynthetic process
GO:0006228UTP biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NDK1ATCC64974_8440Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_8440-T1ATCC64974_8440-T1-proteinAspergillus niger N402polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_8440-T1.exon1ATCC64974_8440-T1.exon1Aspergillus niger N402exon
ATCC64974_8440-T1.exon2ATCC64974_8440-T1.exon2Aspergillus niger N402exon
ATCC64974_8440-T1.exon3ATCC64974_8440-T1.exon3Aspergillus niger N402exon
ATCC64974_8440-T1.exon4ATCC64974_8440-T1.exon4Aspergillus niger N402exon
ATCC64974_8440-T1.exon5ATCC64974_8440-T1.exon5Aspergillus niger N402exon
ATCC64974_8440-T1.exon6ATCC64974_8440-T1.exon6Aspergillus niger N402exon
ATCC64974_8440-T1.exon7ATCC64974_8440-T1.exon7Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_8440-T1.cdsATCC64974_8440-T1.cdsAspergillus niger N402CDS


Properties
Property NameValue
NoteBUSCO:EOG09264YKY
DBxrefInterPro:IPR023005
DBxrefInterPro:IPR036850
DBxrefInterPro:IPR034907
DBxrefInterPro:IPR001564
DBxrefPFAM:PF00334
Productnucleoside diphosphate kinase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000002.1supercontigOGUI01000002.1:307309..308252 +
Powered by Drupal