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ATCC64974_85480-T1, ATCC64974_85480-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_85480-T1
Unique NameATCC64974_85480-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000015.1:130660..131435-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_85480-T1 ID=ATCC64974_85480-T1|Name=ATCC64974_85480-T1|organism=Aspergillus niger N402|type=mRNA|length=776bp|location=Sequence derived from alignment at OGUI01000015.1:130660..131435- (Aspergillus niger N402)
ATGAAGCTCGTTTATCTCGGGGTAAGGAATGACGGATGTTAATCTGTTCA
TCGTGTCGGCTGTCTGACCCCGTTCATCTGGACAGATTCTCCAAAATGCT
CAAGCTCCCGCCGTGGAGCTCTGCGCCGAGCGCGATCTCAGCAGCTATTC
GCGCTTCACCAAGGGCAGCGTCAGCGAATTCATGACGATGTTCAGTAAGA
CCGTGGCCGAACGGACGAAACAAGGACAAAGACAGGACATTCAAGAGCAA
GGCAAGTTGGCGTCCCTCGGGGTCGTCTTTTCACCCCCTCTGCGGCAGCC
CCTGACCGCCGGTCGCCTACAGATTTCACATTTCACGTCTACGCGCGAAC
CCAAGGCATCGCCGGAGTGATTATTAGCGATAATGAGTACCCGTCCCTGG
CTGCTCACCAGATCCTCTCGAAGATGCTGGATGAGTTCCTCTCCCTGAAC
CCGAACGCCGCCTCCTCCCGTGACCCGGTGCCCTTCCCCTCCCTCAAGAC
CTACATTCAGGCGTACCAGGACCCACACCAGGTGGATAGCATCCTCAAGA
TTCAGAAGGAGCTGGACGAGACCAAGATCGTTTTGCATAAGACTATCGAG
AGCGTATGTTCTGCGCGCATTACATGTGGGCAGAATGGTGCTAACTCCCC
AACCAGGTCCTCGAGCGCGGAGAGAAGATTGACGATCTCGTGTCCAAGTC
GGAGGGGCTCAGTGCCCAGTCGAAGATGTTCTACACCTCTGCGAAGAAGC
AGAATTCGTGCTGTGTGATCATGTGA
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Coding sequence (CDS) from alignment at OGUI01000015.1:130660..131435-

>ATCC64974_85480-T1 ID=ATCC64974_85480-T1|Name=ATCC64974_85480-T1|organism=Aspergillus niger N402|type=CDS|length=2352bp|location=Sequence derived from alignment at OGUI01000015.1:130660..131435- (Aspergillus niger N402)
GTCCTCGAGCGCGGAGAGAAGATTGACGATCTCGTGTCCAAGTCGGAGGG
GCTCAGTGCCCAGTCGAAGATGTTCTACACCTCTGCGAAGAAGCAGAATT
CGTGCTGTGTGATCATGTGAATTTCACATTTCACGTCTACGCGCGAACCC
AAGGCATCGCCGGAGTGATTATTAGCGATAATGAGTACCCGTCCCTGGCT
GCTCACCAGATCCTCTCGAAGATGCTGGATGAGTTCCTCTCCCTGAACCC
GAACGCCGCCTCCTCCCGTGACCCGGTGCCCTTCCCCTCCCTCAAGACCT
ACATTCAGGCGTACCAGGACCCACACCAGGTGGATAGCATCCTCAAGATT
CAGAAGGAGCTGGACGAGACCAAGATCGTTTTGCATAAGACTATCGAGAG
CATTCTCCAAAATGCTCAAGCTCCCGCCGTGGAGCTCTGCGCCGAGCGCG
ATCTCAGCAGCTATTCGCGCTTCACCAAGGGCAGCGTCAGCGAATTCATG
ACGATGTTCAGTAAGACCGTGGCCGAACGGACGAAACAAGGACAAAGACA
GGACATTCAAGAGCAAGATGAAGCTCGTTTATCTCGGGGTCCTCGAGCGC
GGAGAGAAGATTGACGATCTCGTGTCCAAGTCGGAGGGGCTCAGTGCCCA
GTCGAAGATGTTCTACACCTCTGCGAAGAAGCAGAATTCGTGCTGTGTGA
TCATGTGAATTTCACATTTCACGTCTACGCGCGAACCCAAGGCATCGCCG
GAGTGATTATTAGCGATAATGAGTACCCGTCCCTGGCTGCTCACCAGATC
CTCTCGAAGATGCTGGATGAGTTCCTCTCCCTGAACCCGAACGCCGCCTC
CTCCCGTGACCCGGTGCCCTTCCCCTCCCTCAAGACCTACATTCAGGCGT
ACCAGGACCCACACCAGGTGGATAGCATCCTCAAGATTCAGAAGGAGCTG
GACGAGACCAAGATCGTTTTGCATAAGACTATCGAGAGCATTCTCCAAAA
TGCTCAAGCTCCCGCCGTGGAGCTCTGCGCCGAGCGCGATCTCAGCAGCT
ATTCGCGCTTCACCAAGGGCAGCGTCAGCGAATTCATGACGATGTTCAGT
AAGACCGTGGCCGAACGGACGAAACAAGGACAAAGACAGGACATTCAAGA
GCAAGATGAAGCTCGTTTATCTCGGGGTCCTCGAGCGCGGAGAGAAGATT
GACGATCTCGTGTCCAAGTCGGAGGGGCTCAGTGCCCAGTCGAAGATGTT
CTACACCTCTGCGAAGAAGCAGAATTCGTGCTGTGTGATCATGTGAATTT
CACATTTCACGTCTACGCGCGAACCCAAGGCATCGCCGGAGTGATTATTA
GCGATAATGAGTACCCGTCCCTGGCTGCTCACCAGATCCTCTCGAAGATG
CTGGATGAGTTCCTCTCCCTGAACCCGAACGCCGCCTCCTCCCGTGACCC
GGTGCCCTTCCCCTCCCTCAAGACCTACATTCAGGCGTACCAGGACCCAC
ACCAGGTGGATAGCATCCTCAAGATTCAGAAGGAGCTGGACGAGACCAAG
ATCGTTTTGCATAAGACTATCGAGAGCATTCTCCAAAATGCTCAAGCTCC
CGCCGTGGAGCTCTGCGCCGAGCGCGATCTCAGCAGCTATTCGCGCTTCA
CCAAGGGCAGCGTCAGCGAATTCATGACGATGTTCAGTAAGACCGTGGCC
GAACGGACGAAACAAGGACAAAGACAGGACATTCAAGAGCAAGATGAAGC
TCGTTTATCTCGGGGTCCTCGAGCGCGGAGAGAAGATTGACGATCTCGTG
TCCAAGTCGGAGGGGCTCAGTGCCCAGTCGAAGATGTTCTACACCTCTGC
GAAGAAGCAGAATTCGTGCTGTGTGATCATGTGAATTTCACATTTCACGT
CTACGCGCGAACCCAAGGCATCGCCGGAGTGATTATTAGCGATAATGAGT
ACCCGTCCCTGGCTGCTCACCAGATCCTCTCGAAGATGCTGGATGAGTTC
CTCTCCCTGAACCCGAACGCCGCCTCCTCCCGTGACCCGGTGCCCTTCCC
CTCCCTCAAGACCTACATTCAGGCGTACCAGGACCCACACCAGGTGGATA
GCATCCTCAAGATTCAGAAGGAGCTGGACGAGACCAAGATCGTTTTGCAT
AAGACTATCGAGAGCATTCTCCAAAATGCTCAAGCTCCCGCCGTGGAGCT
CTGCGCCGAGCGCGATCTCAGCAGCTATTCGCGCTTCACCAAGGGCAGCG
TCAGCGAATTCATGACGATGTTCAGTAAGACCGTGGCCGAACGGACGAAA
CAAGGACAAAGACAGGACATTCAAGAGCAAGATGAAGCTCGTTTATCTCG
GG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_85480ATCC64974_85480Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_85480-T1ATCC64974_85480-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_85480-T1.cdsATCC64974_85480-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_85480-T1.exon4ATCC64974_85480-T1.exon4Aspergillus niger N402exon
ATCC64974_85480-T1.exon3ATCC64974_85480-T1.exon3Aspergillus niger N402exon
ATCC64974_85480-T1.exon2ATCC64974_85480-T1.exon2Aspergillus niger N402exon
ATCC64974_85480-T1.exon1ATCC64974_85480-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09264CP4
DBxrefInterPro:IPR011012
DBxrefInterPro:IPR010908
DBxrefInterPro:IPR001388
DBxrefPFAM:PF00957
DBxrefPFAM:PF13774
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000015.1supercontigOGUI01000015.1:130660..131435 -
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