You are here

Home

ATCC64974_85800-T1, ATCC64974_85800-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_85800-T1
Unique NameATCC64974_85800-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000015.1:230254..231827+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_85800-T1 ID=ATCC64974_85800-T1|Name=ATCC64974_85800-T1|organism=Aspergillus niger N402|type=mRNA|length=1574bp|location=Sequence derived from alignment at OGUI01000015.1:230254..231827+ (Aspergillus niger N402)
ATGGCTGCAGGTGAGCAATTTGAATACATTATTGTCGGTGGTGGTACAGC
CGGCTGTGTCCTAGCCTCACGGCTGAAGCAATACAACTCCTCTTTGTCGA
TCTTGCTTGTCGAAGCGGGGCCCGATGCCAGCAATCACCCCCTCGTACCA
GACGGAAGTAAAGCCACTCAGTTACTTGGATCAGAGCTAGATTGGACATA
CGATACAGTGCCGCAGAAGCATCTTCATGACAGCGTACTCTCAAACCATG
CAGGAAAAGCTCTAGGTGGTAGTACCACAATTAACAGCGGTGAGCCTTAG
TATTCATTCATCGAGGGTCTGAACTTCAAGGAGGTGATGATGGACTTGGG
GTGATATCGTACAGAGCTAATGGACCCTATACGGCGCGATTAGGCGGATG
GATGCGAGGTGCAAAAGAAGATTATGACCTCTGGGCCAGCTTGGTCGGTG
ACTTTCGATGGAGCTACCATGGTCTCCTTCCTTACTTCCGGAAGCTTGAG
CATCACTTCGATCCCTTTGCCGACCCTGAAGTTCACGGGTTTGAAGGTCC
TATCAAAACCGAGTCCGTATCCTCTACAGGCCGCAGATACCCTCTTCGTC
AATTGGTGCAAGAGGTCTGGAATTCCGTCGGTGTAGCATATAACTCCAAC
ATTAATTCCGGCAGTCCTTACGGGCTGGTTGAGGTTGTCGAGAATCGCGA
CCACGGAATGAGACAAATGTCGAGCTCCGTTTATCCTCTAGACGTGGAGG
TCATGACTGAAACCCTGGTCAAGCGAGTGCTGGTGGAGGAACGCGATGAC
CAAAAGGTTGCAATAGGTGTAGTGTTGGAGGATACGGACGAAAGCCAGAT
TATTGCACGTCAAGAGGTGATCATATCTGCAGGTGCATATCGTACCCCTC
AGCTCATGATGCTTTCGGGGATTGGCCCAGCGGAGGAATTGCGAGCCTAC
GGGATCGATATTGTTCTCGATCTTCCGGATGTAGGCCGTCACTTTGCGGA
CCATGTAGCAGTCTCTCAGTGGTGGCAGTTGAAGCACCCGGAGAAGGGGC
TATCAATCGGATCACCCGCCTTCACCGACCCAGCTTTCTTCCGAGGAAAT
CCCATTGACTTTGTGGCCTTAGATTCAGTGCCCCTCGATGGCCTTCGTCA
AGCGTTGGTCAAGGACGACCCCAATTCGAACCCGGATGAGCATCCACTCA
TTGCCTCCCAGCGTGTGCATGTGGAAACATTCACAGTGTATGCGGCAGGA
AATGCTCAGAACCCTACAATTGCTACAGATGGCACACATATCACGACCGG
CGTATCCTGTATGCTTCCTACCTCTCGGGGCAGTATCAAGCTGGCAGATC
GAGACGTCCGAAGCGCGCCTCGTATCGATCCTAATTACTGTGCTACCGAG
GCTGATCGATATGTCCTGCGTGAGGGGCTTCGGAAATTGCGAAAAGCCTT
GCGCGACACTTCAGCGGGTCAGGAAATGATTGAATCAGAAACTGTCGAAG
AAAACTATGATCCTTTAGGTCCTGAAACAGATGATGAAGCTCTTGATGAT
CTCATCCGCCGTCGAGCTGCGTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000015.1:230254..231827+

>ATCC64974_85800-T1 ID=ATCC64974_85800-T1|Name=ATCC64974_85800-T1|organism=Aspergillus niger N402|type=CDS|length=2940bp|location=Sequence derived from alignment at OGUI01000015.1:230254..231827+ (Aspergillus niger N402)
ATGGCTGCAGGTGAGCAATTTGAATACATTATTGTCGGTGGTGGTACAGC
CGGCTGTGTCCTAGCCTCACGGCTGAAGCAATACAACTCCTCTTTGTCGA
TCTTGCTTGTCGAAGCGGGGCCCGATGCCAGCAATCACCCCCTCGTACCA
GACGGAAGTAAAGCCACTCAGTTACTTGGATCAGAGCTAGATTGGACATA
CGATACAGTGCCGCAGAAGCATCTTCATGACAGCGTACTCTCAAACCATG
CAGGAAAAGCTCTAGGTGGTAGTACCACAATTAACAGCGGCGGATGGATG
CGAGGTGCAAAAGAAGATTATGACCTCTGGGCCAGCTTGGTCGGTGACTT
TCGATGGAGCTACCATGGTCTCCTTCCTTACTTCCGGAAGCTTGAGCATC
ACTTCGATCCCTTTGCCGACCCTGAAGTTCACGGGTTTGAAGGTCCTATC
AAAACCGAGTCCGTATCCTCTACAGGCCGCAGATACCCTCTTCGTCAATT
GGTGCAAGAGGTCTGGAATTCCGTCGGTGTAGCATATAACTCCAACATTA
ATTCCGGCAGTCCTTACGGGCTGGTTGAGGTTGTCGAGAATCGCGACCAC
GGAATGAGACAAATGTCGAGCTCCGTTTATCCTCTAGACGTGGAGGTCAT
GACTGAAACCCTGGTCAAGCGAGTGCTGGTGGAGGAACGCGATGACCAAA
AGGTTGCAATAGGTGTAGTGTTGGAGGATACGGACGAAAGCCAGATTATT
GCACGTCAAGAGGTGATCATATCTGCAGGTGCATATCGTACCCCTCAGCT
CATGATGCTTTCGGGGATTGGCCCAGCGGAGGAATTGCGAGCCTACGGGA
TCGATATTGTTCTCGATCTTCCGGATGTAGGCCGTCACTTTGCGGACCAT
GTAGCAGTCTCTCAGTGGTGGCAGTTGAAGCACCCGGAGAAGGGGCTATC
AATCGGATCACCCGCCTTCACCGACCCAGCTTTCTTCCGAGGAAATCCCA
TTGACTTTGTGGCCTTAGATTCAGTGCCCCTCGATGGCCTTCGTCAAGCG
TTGGTCAAGGACGACCCCAATTCGAACCCGGATGAGCATCCACTCATTGC
CTCCCAGCGTGTGCATGTGGAAACATTCACAGTGTATGCGGCAGGAAATG
CTCAGAACCCTACAATTGCTACAGATGGCACACATATCACGACCGGCGTA
TCCTGTATGCTTCCTACCTCTCGGGGCAGTATCAAGCTGGCAGATCGAGA
CGTCCGAAGCGCGCCTCGTATCGATCCTAATTACTGTGCTACCGAGGCTG
ATCGATATGTCCTGCGTGAGGGGCTTCGGAAATTGCGAAAAGCCTTGCGC
GACACTTCAGCGGGTCAGGAAATGATTGAATCAGAAACTGTCGAAGAAAA
CTATGATCCTTTAGGTCCTGAAACAGATGATGAAGCTCTTGATGATCTCA
TCCGCCGTCGAGCTGCGTAAATGGCTGCAGGTGAGCAATTTGAATACATT
ATTGTCGGTGGTGGTACAGCCGGCTGTGTCCTAGCCTCACGGCTGAAGCA
ATACAACTCCTCTTTGTCGATCTTGCTTGTCGAAGCGGGGCCCGATGCCA
GCAATCACCCCCTCGTACCAGACGGAAGTAAAGCCACTCAGTTACTTGGA
TCAGAGCTAGATTGGACATACGATACAGTGCCGCAGAAGCATCTTCATGA
CAGCGTACTCTCAAACCATGCAGGAAAAGCTCTAGGTGGTAGTACCACAA
TTAACAGCGGCGGATGGATGCGAGGTGCAAAAGAAGATTATGACCTCTGG
GCCAGCTTGGTCGGTGACTTTCGATGGAGCTACCATGGTCTCCTTCCTTA
CTTCCGGAAGCTTGAGCATCACTTCGATCCCTTTGCCGACCCTGAAGTTC
ACGGGTTTGAAGGTCCTATCAAAACCGAGTCCGTATCCTCTACAGGCCGC
AGATACCCTCTTCGTCAATTGGTGCAAGAGGTCTGGAATTCCGTCGGTGT
AGCATATAACTCCAACATTAATTCCGGCAGTCCTTACGGGCTGGTTGAGG
TTGTCGAGAATCGCGACCACGGAATGAGACAAATGTCGAGCTCCGTTTAT
CCTCTAGACGTGGAGGTCATGACTGAAACCCTGGTCAAGCGAGTGCTGGT
GGAGGAACGCGATGACCAAAAGGTTGCAATAGGTGTAGTGTTGGAGGATA
CGGACGAAAGCCAGATTATTGCACGTCAAGAGGTGATCATATCTGCAGGT
GCATATCGTACCCCTCAGCTCATGATGCTTTCGGGGATTGGCCCAGCGGA
GGAATTGCGAGCCTACGGGATCGATATTGTTCTCGATCTTCCGGATGTAG
GCCGTCACTTTGCGGACCATGTAGCAGTCTCTCAGTGGTGGCAGTTGAAG
CACCCGGAGAAGGGGCTATCAATCGGATCACCCGCCTTCACCGACCCAGC
TTTCTTCCGAGGAAATCCCATTGACTTTGTGGCCTTAGATTCAGTGCCCC
TCGATGGCCTTCGTCAAGCGTTGGTCAAGGACGACCCCAATTCGAACCCG
GATGAGCATCCACTCATTGCCTCCCAGCGTGTGCATGTGGAAACATTCAC
AGTGTATGCGGCAGGAAATGCTCAGAACCCTACAATTGCTACAGATGGCA
CACATATCACGACCGGCGTATCCTGTATGCTTCCTACCTCTCGGGGCAGT
ATCAAGCTGGCAGATCGAGACGTCCGAAGCGCGCCTCGTATCGATCCTAA
TTACTGTGCTACCGAGGCTGATCGATATGTCCTGCGTGAGGGGCTTCGGA
AATTGCGAAAAGCCTTGCGCGACACTTCAGCGGGTCAGGAAATGATTGAA
TCAGAAACTGTCGAAGAAAACTATGATCCTTTAGGTCCTGAAACAGATGA
TGAAGCTCTTGATGATCTCATCCGCCGTCGAGCTGCGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0050660flavin adenine dinucleotide binding
GO:0016614oxidoreductase activity, acting on CH-OH group of donors
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_85800ATCC64974_85800Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_85800-T1.exon1ATCC64974_85800-T1.exon1Aspergillus niger N402exon
ATCC64974_85800-T1.exon2ATCC64974_85800-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_85800-T1.cdsATCC64974_85800-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_85800-T1ATCC64974_85800-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteCAZy:AA3_3
NoteCAZy:AA3_2
DBxrefInterPro:IPR012132
DBxrefInterPro:IPR036188
DBxrefInterPro:IPR007867
DBxrefInterPro:IPR000172
DBxrefPFAM:PF00732
DBxrefPFAM:PF05199
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000015.1supercontigOGUI01000015.1:230254..231827 +
Powered by Drupal