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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000015.1:253199..253837- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_85860-T1 ID=ATCC64974_85860-T1|Name=ATCC64974_85860-T1|organism=Aspergillus niger N402|type=mRNA|length=639bp|location=Sequence derived from alignment at OGUI01000015.1:253199..253837- (Aspergillus niger N402)
ATGACGAAGCGCACCAAGAGTATGTGCCCCTTTTGAACCTCTACTGGAGG
ACCGATGAACTCTTGAATGAATGAACGATGAATCGCGAGACTAACAATTA
TTGCAGAGGTCGGTATCACGGGTAAATATGGTACCAGGTATGCAGCCACG
CTTTTCCACCACGACGGTTTGAAATCGGGATGAAGTCGATCGCGTTTTTA
TTCTCCGAAAATCGAAGACGACAGATTCAGCCTTGAATTTCGCCATACAG
AAGAATCGATATTGACGATGGTGATAATAGATACGGTGCCTCCCTGCGTA
AGCAGGTGAAGAAGATGGAAGTGTCCCAGCACGCCCGTTACATCTGCACC
TTCTGCGGAAAGAACACCGTCAAGCGCAAGGCTGTTGGTATCTGGGAGTG
CAAGGGCTGCAACAAGACTGTTGCCGGTGGTGCCTACACTGTCTCGTAAG
TACCGAATCTGCTGCTGCTGCTTTCGATAAGCTGCGTCCTGGGCCCAGTG
CAGTCTCCATCTATACGGACTGGGCCTCAAGAAGCGGACGTGACATGGAT
GCTAATCGCTCGGGTTGTGTTACAGTACCCCCGCCGCTGCCGCCACTCGC
TCCACTATCCGTCGTCTCAGAGAAATCGCGGAGGTTTAG back to topCoding sequence (CDS) from alignment at OGUI01000015.1:253199..253837- >ATCC64974_85860-T1 ID=ATCC64974_85860-T1|Name=ATCC64974_85860-T1|organism=Aspergillus niger N402|type=CDS|length=1116bp|location=Sequence derived from alignment at OGUI01000015.1:253199..253837- (Aspergillus niger N402)
TACCCCCGCCGCTGCCGCCACTCGCTCCACTATCCGTCGTCTCAGAGAAA
TCGCGGAGGTTTAGATACGGTGCCTCCCTGCGTAAGCAGGTGAAGAAGAT
GGAAGTGTCCCAGCACGCCCGTTACATCTGCACCTTCTGCGGAAAGAACA
CCGTCAAGCGCAAGGCTGTTGGTATCTGGGAGTGCAAGGGCTGCAACAAG
ACTGTTGCCGGTGGTGCCTACACTGTCTCAGGTCGGTATCACGGGTAAAT
ATGGTACCAGATGACGAAGCGCACCAAGATACCCCCGCCGCTGCCGCCAC
TCGCTCCACTATCCGTCGTCTCAGAGAAATCGCGGAGGTTTAGATACGGT
GCCTCCCTGCGTAAGCAGGTGAAGAAGATGGAAGTGTCCCAGCACGCCCG
TTACATCTGCACCTTCTGCGGAAAGAACACCGTCAAGCGCAAGGCTGTTG
GTATCTGGGAGTGCAAGGGCTGCAACAAGACTGTTGCCGGTGGTGCCTAC
ACTGTCTCAGGTCGGTATCACGGGTAAATATGGTACCAGATGACGAAGCG
CACCAAGATACCCCCGCCGCTGCCGCCACTCGCTCCACTATCCGTCGTCT
CAGAGAAATCGCGGAGGTTTAGATACGGTGCCTCCCTGCGTAAGCAGGTG
AAGAAGATGGAAGTGTCCCAGCACGCCCGTTACATCTGCACCTTCTGCGG
AAAGAACACCGTCAAGCGCAAGGCTGTTGGTATCTGGGAGTGCAAGGGCT
GCAACAAGACTGTTGCCGGTGGTGCCTACACTGTCTCAGGTCGGTATCAC
GGGTAAATATGGTACCAGATGACGAAGCGCACCAAGATACCCCCGCCGCT
GCCGCCACTCGCTCCACTATCCGTCGTCTCAGAGAAATCGCGGAGGTTTA
GATACGGTGCCTCCCTGCGTAAGCAGGTGAAGAAGATGGAAGTGTCCCAG
CACGCCCGTTACATCTGCACCTTCTGCGGAAAGAACACCGTCAAGCGCAA
GGCTGTTGGTATCTGGGAGTGCAAGGGCTGCAACAAGACTGTTGCCGGTG
GTGCCTACACTGTCTCAGGTCGGTATCACGGGTAAATATGGTACCAGATG
ACGAAGCGCACCAAGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_85860-T1 | ATCC64974_85860-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011332 |
| DBxref | InterPro:IPR002674 |
| DBxref | InterPro:IPR011331 |
| DBxref | PFAM:PF01780 |
| Product | 60S ribosomal protein L43A |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000015.1 | supercontig | OGUI01000015.1:253199..253837 - |
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