|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000015.1:270354..272235+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_85940-T1 ID=ATCC64974_85940-T1|Name=ATCC64974_85940-T1|organism=Aspergillus niger N402|type=mRNA|length=1882bp|location=Sequence derived from alignment at OGUI01000015.1:270354..272235+ (Aspergillus niger N402)
ATGGATATATCCGCCCAGACATTCTTCTACCATCTACCCAGAGTGTTGGA
TGACTTGGCATCCTGTTGTTTCGTATCTATAGACTTTGAATTCTCTGGCA
TCGCCAAAGGCCTCGGACCCTCTGCTAAGAGCAGAAGCACCCTACAGGAG
CGCTATGAAGAAGTCAAGAATTCCGCTGATCAATACCAAATCCTACAAGT
CGGCTTGACTATCTGCCATGAGGATCCAGAGACAGGTTAGACACACATGT
CCACCACTCCAGGTTGATGTGTTAATAGCGCAATCACAGCAACGTACACC
TTGAAACCATATAATCTATACTTGAGCCCAATCATCGACCGGAAGCTTGA
TTTAGACAGAAATTGTTCCTTCCAAAGCAGTGGTATGCTCGTTTCAAAGC
TGCCCTCGTCCCGTTAACCTAATAAGATCTACTTAGCCGTCGAGTTCCTC
TTGGAAAACAAGTTTAGCATGGAAGATCTGTACAAGAATGGCGTCACCTA
CTTGTCGAGAGATGAGGAAAGTCGAATAATGGCCAGAGTCATGCAGAGAA
ATGAACGCACGACAGCGCGCAGTTCTCTGGACGTCGGGGACCATGAATAT
GAGTCCTTAGCCTTTTTAAAGGATGTTCGCCGTCTTGTAGATGAATGGCT
GGCGCTTGGTAAAGTAGGAGTTTTGGTCCTCTCTAGTACTGCTTTTCTAA
CCGTTGTTACCAGGCCCGGGAGGATTACCTTAATATCCCGCCACCTCGGC
CTATAACAGGACCTGCTCCATCCAATCACCCCAAGTCTATGCCAACGGAC
CTCAATAGGTTTCAAAAGAGGCTTGTTCATCAGCTCATCGAAGTGGAGTA
TCCGTCTTTGGTGACGGTCAGTAGGCCGGGGTTTATACAGATAATCGACT
ACGACGAACAGCGCGAGAAGGCTGTTCGCGACCAGAGGGTGAAATGGGTA
CAAGAAAGGATCTGGAAACAGACTGGATTCAGATGGATCGCGGAGGCGCT
AGCCGGGGGCGATCTGACCAACCTCGAGCCTTTCTGCTTCATCAATTTGA
TGTCGTCTTCGAAGGAGAACCCCCAAAGTTCTCTTCAGGACTTCTCGCGG
GGGGTGAAGCAGCGGTTGCAGAAGAACAGACCTGTTCTGGTGGGCCATAA
CCTCTTCACGGACCTAATTTACTTTTGTCGGTGCTTCTTCGGGCCTCTCC
CGGACCGTGTGGAGGATTTCCAAGCCATGGCTCATGAGATGTTTCCGGTG
TTGATGGATACGAAGTATATGGCTACACACAACTGTGGCTCCATAAATCC
TAGGTCTTCCCTGCAGGAAATCAATGACAGCCTCGCTAAACAGCCAACAC
CAGCAATAAGTAGGTCGATAGCAATATTGTCGTTCCTCACTAACGTCGAT
CAGGTATACACCCTCAATTTACCAAATACAACACGCGGGCAATCGATCAC
GAAGCTGGCTTTGATAGTTTGCTCACTGCTCAGGTTTTCATTAAACTTTC
TGCCCAGCTCCGAGACAGGGGAACGTCGGGGATTCCGCCAACAGTTCCAG
AAACACCTCAACCCAGTGAAAAGTCGAAGGAGCCCACGAAGCAGGTTATA
GGCGACTTCGAGGCTACCGTCATTCTACCTAGAGGTCCCAAGTCAAACAA
CGTCCGTATTATGTTCGGCTCTATCGAAGTTGAAAGAGTCGTCCAAGACA
ACGGCGGTAGTGATGCTGGCGAGGTAACCAGAATATCCTTAACACCCCGC
GACTCTCCTGAGACACAGAAGAAAGCCGACGAGGGCCGGTTGATTCCACG
CTTAGGCGCGCAATTTTGGAACATTTATGGAAACAAGCTGCGCGTCTTTG
GCACGAATGAAAGGGTATGTCACATTGGCTAG back to topCoding sequence (CDS) from alignment at OGUI01000015.1:270354..272235+ >ATCC64974_85940-T1 ID=ATCC64974_85940-T1|Name=ATCC64974_85940-T1|organism=Aspergillus niger N402|type=CDS|length=6348bp|location=Sequence derived from alignment at OGUI01000015.1:270354..272235+ (Aspergillus niger N402)
ATGGATATATCCGCCCAGACATTCTTCTACCATCTACCCAGAGTGTTGGA
TGACTTGGCATCCTGTTGTTTCGTATCTATAGACTTTGAATTCTCTGGCA
TCGCCAAAGGCCTCGGACCCTCTGCTAAGAGCAGAAGCACCCTACAGGAG
CGCTATGAAGAAGTCAAGAATTCCGCTGATCAATACCAAATCCTACAAGT
CGGCTTGACTATCTGCCATGAGGATCCAGAGACAGCCGTCGAGTTCCTCT
TGGAAAACAAGTTTAGCATGGAAGATCTGTACAAGAATGGCGTCACCTAC
TTGTCGAGAGATGAGGAAAGTCGAATAATGGCCAGAGTCATGCAGAGAAA
TGAACGCACGACAGCGCGCAGTTCTCTGGACGTCGGGGACCATGAATATG
AGTCCTTAGCCTTTTTAAAGGATGTTCGCCGTCTTGTAGATGAATGGCTG
GCGCTTGGTAAAGCCCGGGAGGATTACCTTAATATCCCGCCACCTCGGCC
TATAACAGGACCTGCTCCATCCAATCACCCCAAGTCTATGCCAACGGACC
TCAATAGGTTTCAAAAGAGGCTTGTTCATCAGCTCATCGAAGTGGAGTAT
CCGTCTTTGGTGACGGTCAGTAGGCCGGGGTTTATACAGATAATCGACTA
CGACGAACAGCGCGAGAAGGCTGTTCGCGACCAGAGGGTGAAATGGGTAC
AAGAAAGGATCTGGAAACAGACTGGATTCAGATGGATCGCGGAGGCGCTA
GCCGGGGGCGATCTGACCAACCTCGAGCCTTTCTGCTTCATCAATTTGAT
GTCGTCTTCGAAGGAGAACCCCCAAAGTTCTCTTCAGGACTTCTCGCGGG
GGGTGAAGCAGCGGTTGCAGAAGAACAGACCTGTTCTGGTGGGCCATAAC
CTCTTCACGGACCTAATTTACTTTTGTCGGTGCTTCTTCGGGCCTCTCCC
GGACCGTGTGGAGGATTTCCAAGCCATGGCTCATGAGATGTTTCCGGTGT
TGATGGATACGAAGTATATGGCTACACACAACTGTGGCTCCATAAATCCT
AGGTCTTCCCTGCAGGAAATCAATGACAGCCTCGCTAAACAGCCAACACC
AGCAATAAGTATACACCCTCAATTTACCAAATACAACACGCGGGCAATCG
ATCACGAAGCTGGCTTTGATAGTTTGCTCACTGCTCAGGTTTTCATTAAA
CTTTCTGCCCAGCTCCGAGACAGGGGAACGTCGGGGATTCCGCCAACAGT
TCCAGAAACACCTCAACCCAGTGAAAAGTCGAAGGAGCCCACGAAGCAGG
TTATAGGCGACTTCGAGGCTACCGTCATTCTACCTAGAGGTCCCAAGTCA
AACAACGTCCGTATTATGTTCGGCTCTATCGAAGTTGAAAGAGTCGTCCA
AGACAACGGCGGTAGTGATGCTGGCGAGGTAACCAGAATATCCTTAACAC
CCCGCGACTCTCCTGAGACACAGAAGAAAGCCGACGAGGGCCGGTTGATT
CCACGCTTAGGCGCGCAATTTTGGAACATTTATGGAAACAAGCTGCGCGT
CTTTGGCACGAATGAAAGGGTATGTCACATTGGCTAGATGGATATATCCG
CCCAGACATTCTTCTACCATCTACCCAGAGTGTTGGATGACTTGGCATCC
TGTTGTTTCGTATCTATAGACTTTGAATTCTCTGGCATCGCCAAAGGCCT
CGGACCCTCTGCTAAGAGCAGAAGCACCCTACAGGAGCGCTATGAAGAAG
TCAAGAATTCCGCTGATCAATACCAAATCCTACAAGTCGGCTTGACTATC
TGCCATGAGGATCCAGAGACAGCCGTCGAGTTCCTCTTGGAAAACAAGTT
TAGCATGGAAGATCTGTACAAGAATGGCGTCACCTACTTGTCGAGAGATG
AGGAAAGTCGAATAATGGCCAGAGTCATGCAGAGAAATGAACGCACGACA
GCGCGCAGTTCTCTGGACGTCGGGGACCATGAATATGAGTCCTTAGCCTT
TTTAAAGGATGTTCGCCGTCTTGTAGATGAATGGCTGGCGCTTGGTAAAG
CCCGGGAGGATTACCTTAATATCCCGCCACCTCGGCCTATAACAGGACCT
GCTCCATCCAATCACCCCAAGTCTATGCCAACGGACCTCAATAGGTTTCA
AAAGAGGCTTGTTCATCAGCTCATCGAAGTGGAGTATCCGTCTTTGGTGA
CGGTCAGTAGGCCGGGGTTTATACAGATAATCGACTACGACGAACAGCGC
GAGAAGGCTGTTCGCGACCAGAGGGTGAAATGGGTACAAGAAAGGATCTG
GAAACAGACTGGATTCAGATGGATCGCGGAGGCGCTAGCCGGGGGCGATC
TGACCAACCTCGAGCCTTTCTGCTTCATCAATTTGATGTCGTCTTCGAAG
GAGAACCCCCAAAGTTCTCTTCAGGACTTCTCGCGGGGGGTGAAGCAGCG
GTTGCAGAAGAACAGACCTGTTCTGGTGGGCCATAACCTCTTCACGGACC
TAATTTACTTTTGTCGGTGCTTCTTCGGGCCTCTCCCGGACCGTGTGGAG
GATTTCCAAGCCATGGCTCATGAGATGTTTCCGGTGTTGATGGATACGAA
GTATATGGCTACACACAACTGTGGCTCCATAAATCCTAGGTCTTCCCTGC
AGGAAATCAATGACAGCCTCGCTAAACAGCCAACACCAGCAATAAGTATA
CACCCTCAATTTACCAAATACAACACGCGGGCAATCGATCACGAAGCTGG
CTTTGATAGTTTGCTCACTGCTCAGGTTTTCATTAAACTTTCTGCCCAGC
TCCGAGACAGGGGAACGTCGGGGATTCCGCCAACAGTTCCAGAAACACCT
CAACCCAGTGAAAAGTCGAAGGAGCCCACGAAGCAGGTTATAGGCGACTT
CGAGGCTACCGTCATTCTACCTAGAGGTCCCAAGTCAAACAACGTCCGTA
TTATGTTCGGCTCTATCGAAGTTGAAAGAGTCGTCCAAGACAACGGCGGT
AGTGATGCTGGCGAGGTAACCAGAATATCCTTAACACCCCGCGACTCTCC
TGAGACACAGAAGAAAGCCGACGAGGGCCGGTTGATTCCACGCTTAGGCG
CGCAATTTTGGAACATTTATGGAAACAAGCTGCGCGTCTTTGGCACGAAT
GAAAGGGTATGTCACATTGGCTAGATGGATATATCCGCCCAGACATTCTT
CTACCATCTACCCAGAGTGTTGGATGACTTGGCATCCTGTTGTTTCGTAT
CTATAGACTTTGAATTCTCTGGCATCGCCAAAGGCCTCGGACCCTCTGCT
AAGAGCAGAAGCACCCTACAGGAGCGCTATGAAGAAGTCAAGAATTCCGC
TGATCAATACCAAATCCTACAAGTCGGCTTGACTATCTGCCATGAGGATC
CAGAGACAGCCGTCGAGTTCCTCTTGGAAAACAAGTTTAGCATGGAAGAT
CTGTACAAGAATGGCGTCACCTACTTGTCGAGAGATGAGGAAAGTCGAAT
AATGGCCAGAGTCATGCAGAGAAATGAACGCACGACAGCGCGCAGTTCTC
TGGACGTCGGGGACCATGAATATGAGTCCTTAGCCTTTTTAAAGGATGTT
CGCCGTCTTGTAGATGAATGGCTGGCGCTTGGTAAAGCCCGGGAGGATTA
CCTTAATATCCCGCCACCTCGGCCTATAACAGGACCTGCTCCATCCAATC
ACCCCAAGTCTATGCCAACGGACCTCAATAGGTTTCAAAAGAGGCTTGTT
CATCAGCTCATCGAAGTGGAGTATCCGTCTTTGGTGACGGTCAGTAGGCC
GGGGTTTATACAGATAATCGACTACGACGAACAGCGCGAGAAGGCTGTTC
GCGACCAGAGGGTGAAATGGGTACAAGAAAGGATCTGGAAACAGACTGGA
TTCAGATGGATCGCGGAGGCGCTAGCCGGGGGCGATCTGACCAACCTCGA
GCCTTTCTGCTTCATCAATTTGATGTCGTCTTCGAAGGAGAACCCCCAAA
GTTCTCTTCAGGACTTCTCGCGGGGGGTGAAGCAGCGGTTGCAGAAGAAC
AGACCTGTTCTGGTGGGCCATAACCTCTTCACGGACCTAATTTACTTTTG
TCGGTGCTTCTTCGGGCCTCTCCCGGACCGTGTGGAGGATTTCCAAGCCA
TGGCTCATGAGATGTTTCCGGTGTTGATGGATACGAAGTATATGGCTACA
CACAACTGTGGCTCCATAAATCCTAGGTCTTCCCTGCAGGAAATCAATGA
CAGCCTCGCTAAACAGCCAACACCAGCAATAAGTATACACCCTCAATTTA
CCAAATACAACACGCGGGCAATCGATCACGAAGCTGGCTTTGATAGTTTG
CTCACTGCTCAGGTTTTCATTAAACTTTCTGCCCAGCTCCGAGACAGGGG
AACGTCGGGGATTCCGCCAACAGTTCCAGAAACACCTCAACCCAGTGAAA
AGTCGAAGGAGCCCACGAAGCAGGTTATAGGCGACTTCGAGGCTACCGTC
ATTCTACCTAGAGGTCCCAAGTCAAACAACGTCCGTATTATGTTCGGCTC
TATCGAAGTTGAAAGAGTCGTCCAAGACAACGGCGGTAGTGATGCTGGCG
AGGTAACCAGAATATCCTTAACACCCCGCGACTCTCCTGAGACACAGAAG
AAAGCCGACGAGGGCCGGTTGATTCCACGCTTAGGCGCGCAATTTTGGAA
CATTTATGGAAACAAGCTGCGCGTCTTTGGCACGAATGAAAGGGTATGTC
ACATTGGCTAGATGGATATATCCGCCCAGACATTCTTCTACCATCTACCC
AGAGTGTTGGATGACTTGGCATCCTGTTGTTTCGTATCTATAGACTTTGA
ATTCTCTGGCATCGCCAAAGGCCTCGGACCCTCTGCTAAGAGCAGAAGCA
CCCTACAGGAGCGCTATGAAGAAGTCAAGAATTCCGCTGATCAATACCAA
ATCCTACAAGTCGGCTTGACTATCTGCCATGAGGATCCAGAGACAGCCGT
CGAGTTCCTCTTGGAAAACAAGTTTAGCATGGAAGATCTGTACAAGAATG
GCGTCACCTACTTGTCGAGAGATGAGGAAAGTCGAATAATGGCCAGAGTC
ATGCAGAGAAATGAACGCACGACAGCGCGCAGTTCTCTGGACGTCGGGGA
CCATGAATATGAGTCCTTAGCCTTTTTAAAGGATGTTCGCCGTCTTGTAG
ATGAATGGCTGGCGCTTGGTAAAGCCCGGGAGGATTACCTTAATATCCCG
CCACCTCGGCCTATAACAGGACCTGCTCCATCCAATCACCCCAAGTCTAT
GCCAACGGACCTCAATAGGTTTCAAAAGAGGCTTGTTCATCAGCTCATCG
AAGTGGAGTATCCGTCTTTGGTGACGGTCAGTAGGCCGGGGTTTATACAG
ATAATCGACTACGACGAACAGCGCGAGAAGGCTGTTCGCGACCAGAGGGT
GAAATGGGTACAAGAAAGGATCTGGAAACAGACTGGATTCAGATGGATCG
CGGAGGCGCTAGCCGGGGGCGATCTGACCAACCTCGAGCCTTTCTGCTTC
ATCAATTTGATGTCGTCTTCGAAGGAGAACCCCCAAAGTTCTCTTCAGGA
CTTCTCGCGGGGGGTGAAGCAGCGGTTGCAGAAGAACAGACCTGTTCTGG
TGGGCCATAACCTCTTCACGGACCTAATTTACTTTTGTCGGTGCTTCTTC
GGGCCTCTCCCGGACCGTGTGGAGGATTTCCAAGCCATGGCTCATGAGAT
GTTTCCGGTGTTGATGGATACGAAGTATATGGCTACACACAACTGTGGCT
CCATAAATCCTAGGTCTTCCCTGCAGGAAATCAATGACAGCCTCGCTAAA
CAGCCAACACCAGCAATAAGTATACACCCTCAATTTACCAAATACAACAC
GCGGGCAATCGATCACGAAGCTGGCTTTGATAGTTTGCTCACTGCTCAGG
TTTTCATTAAACTTTCTGCCCAGCTCCGAGACAGGGGAACGTCGGGGATT
CCGCCAACAGTTCCAGAAACACCTCAACCCAGTGAAAAGTCGAAGGAGCC
CACGAAGCAGGTTATAGGCGACTTCGAGGCTACCGTCATTCTACCTAGAG
GTCCCAAGTCAAACAACGTCCGTATTATGTTCGGCTCTATCGAAGTTGAA
AGAGTCGTCCAAGACAACGGCGGTAGTGATGCTGGCGAGGTAACCAGAAT
ATCCTTAACACCCCGCGACTCTCCTGAGACACAGAAGAAAGCCGACGAGG
GCCGGTTGATTCCACGCTTAGGCGCGCAATTTTGGAACATTTATGGAAAC
AAGCTGCGCGTCTTTGGCACGAATGAAAGGGTATGTCACATTGGCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_85940-T1 | ATCC64974_85940-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012337 |
| DBxref | InterPro:IPR006941 |
| DBxref | InterPro:IPR036397 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000015.1 | supercontig | OGUI01000015.1:270354..272235 + |
|
