You are here

Home

ATCC64974_86740-T1, ATCC64974_86740-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_86740-T1
Unique NameATCC64974_86740-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000015.1:535052..536721+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_86740-T1 ID=ATCC64974_86740-T1|Name=ATCC64974_86740-T1|organism=Aspergillus niger N402|type=mRNA|length=1670bp|location=Sequence derived from alignment at OGUI01000015.1:535052..536721+ (Aspergillus niger N402)
ATGCATCAAGTGTTGAAAGAGGATGGTACTACGGTGGAGCATGATGAGAG
AGGCACCCTTGGTGTTGAAGCGGTGGATATGCTGCCCTCATATGGCCCGG
ATGGCGTCAGAGGGCTTTTCAGCTCGGGGTATGTTCTTGGAGCCGCCTGC
CTTGCTTCTCTTGGGGGTTTCAGCTTTGGGTATGACCAGGGAGTCATATC
AGTCATCAATGTCATGCCACAATTCCATGCGGCTATCCCGCAGGCGGAGA
GTGAATTTGGCAAAGGGTTTATGACAGGCATGCTACTCCTCGGGGCATTT
GTCGGTTGTATCTTCATGCCTTATCTTGCAGACAGGATCTCCAGGAAATG
GGCCCTGACGGTGGTCGTTATCATTTTTGACATTGGGGCCGTTATCCAGA
CCTCGGCCCAAAGTTACGGCATGCTGGTTGCCGGAAGAGCAATTGGTGGT
ATTGGGGTTGGTACACTGGCTATGGTATGGATGAATCTCCGGCCGAATGC
AACATATTGCTTGCTAATATATCTGGCTACTAGGGCGCACCGCTTTATAT
CTCAGAAATTTCACCACCAAACCTGCGGGGAACCCTCTTAGTGCTCGAAT
CCATTTGCCTCGTGTCCGGCGCGGTCATAGCTTATTGGGTAACGTTCGGC
ATGAGATTAGTTGATAGTGAAGCTTCATTCCGTGTGCCTTTTGGCTTGCA
GATGGTCAGTGCAACTCTTGTTGGGGTCGGTATCCATTTCTTCCCATACT
CACCACGGTGGTTGGCGCTCGTTGATCGGCAGGAGGATTGCCTCAAGAGT
CTGAGTCGGCTGCGCGGCCTTCCATTGAGCGATCAGAAAGTCCAAGCTGA
ATACAACGCAATCATCGGTGAGGTTAGAGCCCAGAAACTCATGGAACAAC
AACAGCGCCCGGGCGTGACTGGCATCAAGCGAGAGGCTCTGATATGGATG
GACCTATTCAGGCCGCAGACCTGGAAGAGGACAGCAGTCGGTGTGGGTGT
AGGGTTTTTCCAACAATTCTCGGGGGTCAATGCGTTTATTTACTACGCGC
CCACGCTTTTCCAATTGATCGGCCAGAAGGGCGAGATGTCATTGATCTTG
TCAGGTGTATTCAATACCCTCCAGCTTCTCACTGTCCTGGTTTGTTTCTT
AACAATCGACAAAGTTGGTCGGCGCCCCTTGGCGATACTAGGCGGTTTCC
TGATGGGAGCCTGCTATATTATCATTGCCGTGCTGATGGCTCTTTATGGG
CCCGACTGGGCTAACCCATCGGCCGGTTGGGGCTGCGTGGCGGTGGCCTT
TCTTTACATCCTCATCTACGGGAACACATACTCGCCTCTTGGTTGGGCCT
TGCCTTCTGAGGTCTTCCCCAATGCACTTCGTTCGAAAGGGGTTGCGTTA
TCAACTTGCGTCAACTGGCTGTCCAATTTTATTGTTGGGATCGTGACTCC
GGTGATGATGGCTAATATTGGTTATGGCACATACGTCTTTTTTGCCGCGT
GCTGTGTTCTCGCAGGAACGTGGGCCTTTTTTCTGGTTCCCGAGACAACC
GGCAGAACACTGGAGCAGATTGACGAAGTTTTTGGCAATATTAGCAAACA
AGCACACCATGAATTTATGAGGGAAACTACTTTCCAAGCGGCTAGAGGGG
AAGGGAGGCTTGACGTGTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000015.1:535052..536721+

>ATCC64974_86740-T1 ID=ATCC64974_86740-T1|Name=ATCC64974_86740-T1|organism=Aspergillus niger N402|type=CDS|length=3222bp|location=Sequence derived from alignment at OGUI01000015.1:535052..536721+ (Aspergillus niger N402)
ATGCATCAAGTGTTGAAAGAGGATGGTACTACGGTGGAGCATGATGAGAG
AGGCACCCTTGGTGTTGAAGCGGTGGATATGCTGCCCTCATATGGCCCGG
ATGGCGTCAGAGGGCTTTTCAGCTCGGGGTATGTTCTTGGAGCCGCCTGC
CTTGCTTCTCTTGGGGGTTTCAGCTTTGGGTATGACCAGGGAGTCATATC
AGTCATCAATGTCATGCCACAATTCCATGCGGCTATCCCGCAGGCGGAGA
GTGAATTTGGCAAAGGGTTTATGACAGGCATGCTACTCCTCGGGGCATTT
GTCGGTTGTATCTTCATGCCTTATCTTGCAGACAGGATCTCCAGGAAATG
GGCCCTGACGGTGGTCGTTATCATTTTTGACATTGGGGCCGTTATCCAGA
CCTCGGCCCAAAGTTACGGCATGCTGGTTGCCGGAAGAGCAATTGGTGGT
ATTGGGGTTGGTACACTGGCTATGGGCGCACCGCTTTATATCTCAGAAAT
TTCACCACCAAACCTGCGGGGAACCCTCTTAGTGCTCGAATCCATTTGCC
TCGTGTCCGGCGCGGTCATAGCTTATTGGGTAACGTTCGGCATGAGATTA
GTTGATAGTGAAGCTTCATTCCGTGTGCCTTTTGGCTTGCAGATGGTCAG
TGCAACTCTTGTTGGGGTCGGTATCCATTTCTTCCCATACTCACCACGGT
GGTTGGCGCTCGTTGATCGGCAGGAGGATTGCCTCAAGAGTCTGAGTCGG
CTGCGCGGCCTTCCATTGAGCGATCAGAAAGTCCAAGCTGAATACAACGC
AATCATCGGTGAGGTTAGAGCCCAGAAACTCATGGAACAACAACAGCGCC
CGGGCGTGACTGGCATCAAGCGAGAGGCTCTGATATGGATGGACCTATTC
AGGCCGCAGACCTGGAAGAGGACAGCAGTCGGTGTGGGTGTAGGGTTTTT
CCAACAATTCTCGGGGGTCAATGCGTTTATTTACTACGCGCCCACGCTTT
TCCAATTGATCGGCCAGAAGGGCGAGATGTCATTGATCTTGTCAGGTGTA
TTCAATACCCTCCAGCTTCTCACTGTCCTGGTTTGTTTCTTAACAATCGA
CAAAGTTGGTCGGCGCCCCTTGGCGATACTAGGCGGTTTCCTGATGGGAG
CCTGCTATATTATCATTGCCGTGCTGATGGCTCTTTATGGGCCCGACTGG
GCTAACCCATCGGCCGGTTGGGGCTGCGTGGCGGTGGCCTTTCTTTACAT
CCTCATCTACGGGAACACATACTCGCCTCTTGGTTGGGCCTTGCCTTCTG
AGGTCTTCCCCAATGCACTTCGTTCGAAAGGGGTTGCGTTATCAACTTGC
GTCAACTGGCTGTCCAATTTTATTGTTGGGATCGTGACTCCGGTGATGAT
GGCTAATATTGGTTATGGCACATACGTCTTTTTTGCCGCGTGCTGTGTTC
TCGCAGGAACGTGGGCCTTTTTTCTGGTTCCCGAGACAACCGGCAGAACA
CTGGAGCAGATTGACGAAGTTTTTGGCAATATTAGCAAACAAGCACACCA
TGAATTTATGAGGGAAACTACTTTCCAAGCGGCTAGAGGGGAAGGGAGGC
TTGACGTGTGAATGCATCAAGTGTTGAAAGAGGATGGTACTACGGTGGAG
CATGATGAGAGAGGCACCCTTGGTGTTGAAGCGGTGGATATGCTGCCCTC
ATATGGCCCGGATGGCGTCAGAGGGCTTTTCAGCTCGGGGTATGTTCTTG
GAGCCGCCTGCCTTGCTTCTCTTGGGGGTTTCAGCTTTGGGTATGACCAG
GGAGTCATATCAGTCATCAATGTCATGCCACAATTCCATGCGGCTATCCC
GCAGGCGGAGAGTGAATTTGGCAAAGGGTTTATGACAGGCATGCTACTCC
TCGGGGCATTTGTCGGTTGTATCTTCATGCCTTATCTTGCAGACAGGATC
TCCAGGAAATGGGCCCTGACGGTGGTCGTTATCATTTTTGACATTGGGGC
CGTTATCCAGACCTCGGCCCAAAGTTACGGCATGCTGGTTGCCGGAAGAG
CAATTGGTGGTATTGGGGTTGGTACACTGGCTATGGGCGCACCGCTTTAT
ATCTCAGAAATTTCACCACCAAACCTGCGGGGAACCCTCTTAGTGCTCGA
ATCCATTTGCCTCGTGTCCGGCGCGGTCATAGCTTATTGGGTAACGTTCG
GCATGAGATTAGTTGATAGTGAAGCTTCATTCCGTGTGCCTTTTGGCTTG
CAGATGGTCAGTGCAACTCTTGTTGGGGTCGGTATCCATTTCTTCCCATA
CTCACCACGGTGGTTGGCGCTCGTTGATCGGCAGGAGGATTGCCTCAAGA
GTCTGAGTCGGCTGCGCGGCCTTCCATTGAGCGATCAGAAAGTCCAAGCT
GAATACAACGCAATCATCGGTGAGGTTAGAGCCCAGAAACTCATGGAACA
ACAACAGCGCCCGGGCGTGACTGGCATCAAGCGAGAGGCTCTGATATGGA
TGGACCTATTCAGGCCGCAGACCTGGAAGAGGACAGCAGTCGGTGTGGGT
GTAGGGTTTTTCCAACAATTCTCGGGGGTCAATGCGTTTATTTACTACGC
GCCCACGCTTTTCCAATTGATCGGCCAGAAGGGCGAGATGTCATTGATCT
TGTCAGGTGTATTCAATACCCTCCAGCTTCTCACTGTCCTGGTTTGTTTC
TTAACAATCGACAAAGTTGGTCGGCGCCCCTTGGCGATACTAGGCGGTTT
CCTGATGGGAGCCTGCTATATTATCATTGCCGTGCTGATGGCTCTTTATG
GGCCCGACTGGGCTAACCCATCGGCCGGTTGGGGCTGCGTGGCGGTGGCC
TTTCTTTACATCCTCATCTACGGGAACACATACTCGCCTCTTGGTTGGGC
CTTGCCTTCTGAGGTCTTCCCCAATGCACTTCGTTCGAAAGGGGTTGCGT
TATCAACTTGCGTCAACTGGCTGTCCAATTTTATTGTTGGGATCGTGACT
CCGGTGATGATGGCTAATATTGGTTATGGCACATACGTCTTTTTTGCCGC
GTGCTGTGTTCTCGCAGGAACGTGGGCCTTTTTTCTGGTTCCCGAGACAA
CCGGCAGAACACTGGAGCAGATTGACGAAGTTTTTGGCAATATTAGCAAA
CAAGCACACCATGAATTTATGAGGGAAACTACTTTCCAAGCGGCTAGAGG
GGAAGGGAGGCTTGACGTGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_86740ATCC64974_86740Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_86740-T1.exon1ATCC64974_86740-T1.exon1Aspergillus niger N402exon
ATCC64974_86740-T1.exon2ATCC64974_86740-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_86740-T1.cdsATCC64974_86740-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_86740-T1ATCC64974_86740-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000151.2
NoteEggNog:ENOG41
NoteSMCOG1169:sugar transport protein
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000015.1supercontigOGUI01000015.1:535052..536721 +
Powered by Drupal