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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000016.1:37342..38394- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_86890-T1 ID=ATCC64974_86890-T1|Name=ATCC64974_86890-T1|organism=Aspergillus niger N402|type=mRNA|length=1053bp|location=Sequence derived from alignment at OGUI01000016.1:37342..38394- (Aspergillus niger N402)
ATGTCGTCTGCTCCTGATTATGTGATGGGCACGCAAGGCTTCGGGAGTGC
ATGGACCAAAGATAATGTATCCATGCTGGTGGAGGTACTGAATGCCGCTG
GTATAAACCATTATGACACAGCCTTACTATACCCGATGACGAGCCCAGGA
GCTTCCGAAAAGCTGCTAGGAAGCATTCGCCAGGACAATTTTGTGATCGA
TACCAAGATCCTATACCGACCCGAGGCTCTGCGAAGAGAGAACATGGAGG
AGTCAATTCGCCGTAGCTTCGAGAACCTCGGCATCTCAAAGGTAGACGCC
AACATGAATCGTGCAGCAAAGAGATTTTTGTGCTTACCACCAATATCGAT
GTAGATTGCCACCCTCTATGCTCATGCTCCAGACAAATCTGTCTCTATCG
CCGAACAAGCCGCCAATTTTGATCATTTCTACCGAGCTGGTTACTTTGAG
CACCTTGGGCTGTGCAACTACTCTCCCGCACAGCTGAGAGAGTGGGTTGA
AATTGCAACTGCAAACAGCTACGTTATCCCGAGCGTCTACCAGGGCCAGT
ACAACATCTTCTGCCGGCAGTATGAGAGGGAACTGTTCCCCGTCTTGCGT
CAGCACGGCATCAGATTTGTGGCCAATTCCCCGTTGGCCGGCGGCTTTGC
GACAGGGAAGCTAACCTTCGCGAAGGAGGCTGAGCAACTGCGAGGTACTC
GATTTGAGGAAAGTGAGGGAAATGTAATGGGCGATCTGTTCCGCATGTGG
TATGACAAGCCGGTCTTTCATGATGCGGTACGCGACATTGCAACCGGGGT
TGACGGATCGGCGGGCAAGGTTAGCAGCCTGGCGCAGGCAGCGGTGCGCT
GGTTGCTGTTCCACTCAAAACTGGAAAGCACCGACAATATCGCGATCGGC
CCTAGTACACTGGACCAGCTGAAAGAGTACCTTGCCGCACGCGCAGCGGG
ACCCCTGCCTGAGGAGTTGGCAAGGCAGATTGACTGGCTGTATGCATCGT
TGAGGGAAGAGGCTGCGCCGTTGGTGGAGGTTGGATGGTGGACAAAGTCC
TAA back to topCoding sequence (CDS) from alignment at OGUI01000016.1:37342..38394- >ATCC64974_86890-T1 ID=ATCC64974_86890-T1|Name=ATCC64974_86890-T1|organism=Aspergillus niger N402|type=CDS|length=1980bp|location=Sequence derived from alignment at OGUI01000016.1:37342..38394- (Aspergillus niger N402)
ATTGCCACCCTCTATGCTCATGCTCCAGACAAATCTGTCTCTATCGCCGA
ACAAGCCGCCAATTTTGATCATTTCTACCGAGCTGGTTACTTTGAGCACC
TTGGGCTGTGCAACTACTCTCCCGCACAGCTGAGAGAGTGGGTTGAAATT
GCAACTGCAAACAGCTACGTTATCCCGAGCGTCTACCAGGGCCAGTACAA
CATCTTCTGCCGGCAGTATGAGAGGGAACTGTTCCCCGTCTTGCGTCAGC
ACGGCATCAGATTTGTGGCCAATTCCCCGTTGGCCGGCGGCTTTGCGACA
GGGAAGCTAACCTTCGCGAAGGAGGCTGAGCAACTGCGAGGTACTCGATT
TGAGGAAAGTGAGGGAAATGTAATGGGCGATCTGTTCCGCATGTGGTATG
ACAAGCCGGTCTTTCATGATGCGGTACGCGACATTGCAACCGGGGTTGAC
GGATCGGCGGGCAAGGTTAGCAGCCTGGCGCAGGCAGCGGTGCGCTGGTT
GCTGTTCCACTCAAAACTGGAAAGCACCGACAATATCGCGATCGGCCCTA
GTACACTGGACCAGCTGAAAGAGTACCTTGCCGCACGCGCAGCGGGACCC
CTGCCTGAGGAGTTGGCAAGGCAGATTGACTGGCTGTATGCATCGTTGAG
GGAAGAGGCTGCGCCGTTGGTGGAGGTTGGATGGTGGACAAAGTCCTAAA
TGTCGTCTGCTCCTGATTATGTGATGGGCACGCAAGGCTTCGGGAGTGCA
TGGACCAAAGATAATGTATCCATGCTGGTGGAGGTACTGAATGCCGCTGG
TATAAACCATTATGACACAGCCTTACTATACCCGATGACGAGCCCAGGAG
CTTCCGAAAAGCTGCTAGGAAGCATTCGCCAGGACAATTTTGTGATCGAT
ACCAAGATCCTATACCGACCCGAGGCTCTGCGAAGAGAGAACATGGAGGA
GTCAATTCGCCGTAGCTTCGAGAACCTCGGCATCTCAAAGATTGCCACCC
TCTATGCTCATGCTCCAGACAAATCTGTCTCTATCGCCGAACAAGCCGCC
AATTTTGATCATTTCTACCGAGCTGGTTACTTTGAGCACCTTGGGCTGTG
CAACTACTCTCCCGCACAGCTGAGAGAGTGGGTTGAAATTGCAACTGCAA
ACAGCTACGTTATCCCGAGCGTCTACCAGGGCCAGTACAACATCTTCTGC
CGGCAGTATGAGAGGGAACTGTTCCCCGTCTTGCGTCAGCACGGCATCAG
ATTTGTGGCCAATTCCCCGTTGGCCGGCGGCTTTGCGACAGGGAAGCTAA
CCTTCGCGAAGGAGGCTGAGCAACTGCGAGGTACTCGATTTGAGGAAAGT
GAGGGAAATGTAATGGGCGATCTGTTCCGCATGTGGTATGACAAGCCGGT
CTTTCATGATGCGGTACGCGACATTGCAACCGGGGTTGACGGATCGGCGG
GCAAGGTTAGCAGCCTGGCGCAGGCAGCGGTGCGCTGGTTGCTGTTCCAC
TCAAAACTGGAAAGCACCGACAATATCGCGATCGGCCCTAGTACACTGGA
CCAGCTGAAAGAGTACCTTGCCGCACGCGCAGCGGGACCCCTGCCTGAGG
AGTTGGCAAGGCAGATTGACTGGCTGTATGCATCGTTGAGGGAAGAGGCT
GCGCCGTTGGTGGAGGTTGGATGGTGGACAAAGTCCTAAATGTCGTCTGC
TCCTGATTATGTGATGGGCACGCAAGGCTTCGGGAGTGCATGGACCAAAG
ATAATGTATCCATGCTGGTGGAGGTACTGAATGCCGCTGGTATAAACCAT
TATGACACAGCCTTACTATACCCGATGACGAGCCCAGGAGCTTCCGAAAA
GCTGCTAGGAAGCATTCGCCAGGACAATTTTGTGATCGATACCAAGATCC
TATACCGACCCGAGGCTCTGCGAAGAGAGAACATGGAGGAGTCAATTCGC
CGTAGCTTCGAGAACCTCGGCATCTCAAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_86890-T1 | ATCC64974_86890-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR023210 |
| DBxref | InterPro:IPR036812 |
| DBxref | PFAM:PF00248 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000016.1 | supercontig | OGUI01000016.1:37342..38394 - |
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