You are here

Home

ATCC64974_87050-T1, ATCC64974_87050-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_87050-T1
Unique NameATCC64974_87050-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:89636..91296-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_87050-T1 ID=ATCC64974_87050-T1|Name=ATCC64974_87050-T1|organism=Aspergillus niger N402|type=mRNA|length=1661bp|location=Sequence derived from alignment at OGUI01000016.1:89636..91296- (Aspergillus niger N402)
ATGGGCGTGATGCGCAAGACTGCTGACCAGGCCTTGGGCCTGACCGCCAC
CGCCCTGGCTCTGGTCAGTGCCGCCCAGGCCACCTCCCCGTCCGTCACCG
TCTCCCAGGGTCTCATCCGCGGCTTTGAGCACAACGATACGAATGTCTTC
CTGGGTATTCCGTTTGCCGAGACGACCGCTGGTGAGAACCGCTGGAAGGC
CCCCAAGGCTCTGTCGTCCTTTGCCGGAGGCGAGTTCAATGCCACCACCT
ATGGCCCCTCGTGCGCCCAGGCCATGTCTGGCACCGCCATCACGGCCCAG
AGCGAAGACTGCCTCAGCATGAACATCTGGACTCCACTGAGCGGCAGTGA
CCTGCCCGTCTTCGTGTATGTCTACGGTGGAGCCATGGTTACTGGTGGCA
GCAGCAATGCTCAATGGCAGGGCTACAACTTTGCCCGCAAGGATGTCATC
TATGTCAACTTCAACTACCGCGAGAGCATCTACGCTTCGCCTAATGCCCC
GGAACTGGAAGGCCAGTCGCAGAACTTTGGCATCATGGATGTGGATTTGG
CCGTGCAATGGGTCTATGACAACATCGAAGGTATGCTTTCTATTTCCGCT
GCTATTGGCTCACTTAATCACTAACAAACGTCGCAGCTTTCGGAGGAAAC
AAATCGAACATTGTGCTGGGTGGTCACTCCTCTGGCGGTGTGCACGTCGA
CCACTACCTCTGGAACCACCCCGAGACCTTCCTTGCCGGCGCCGTCGAGA
TGTCGGCCAATGCCGAGTCCGGTCCGGCCTATGCCCCTACCGGCGTGGCC
TTGGCTCAGGTCGTCGAGGACATGTTGGCTGCCGGCGTGACACTCGGCTG
CGATGCCAGCAACTACACGTTGGACTGCTTGCGCGAGGCTGATACATATG
CCTTCCAGACCAGCTACTTTAATTCCACCTCCAACACCTGGTTCTCCCCC
ATTGTCGACAACATCACTCGCTTCTCCAACTACACCGACCGTTTTGCCCA
GGGCTACTACCCCAAGTCCCTACCTCTGATGGTTGGTAACTCTGACCAGG
AGGGCCGTCTGTTTGCCTATGCCTATGCCTCCGAAAATACCAAATTCAAC
AAGTGGATCCACACCTTCGACGCGGATGTCGCCTGGGTGCCGTCCGCGGA
GCTCTTGGCTGCGTACAACAGCGCTGATTACTCGTCTGTCTCCTTTGAGA
GTGGCGCCTGCTACGGCGATGCCCGTTTCCTCTGCGCGACCGACTACCTT
GTCGACGTGCGCTCGAGCGAACAGCCCACTTGGATCTACCGCTGGTTTGG
TAACTACTCAAACGTGTTGGGCATCGCCGACATTGGCCCTTCCCACGGCA
GTGAGGTACCCTTCTTCCACGGTGGCAACGAGTGCTTCTCCAAGTTAAGC
GACGTCACCACGGCGGAACAGGAGCTAGCGGACTACATGAACGACTGGTT
TGTGGCCTGGATCAAGGCGCCCAGTGCCGGCCCCGGATGGGACAAAGCTC
AACCCGTCAACGGTCCTCTGGCTCGCCTGGGAGTTCCGGGCAACGAGCTG
GCAATCGAGATGAGCACGACCGGTGCGTACAATGGACGCTGCCAGGCCGT
ATACAAGCCCAACTTTCCCAAGTATCCGGTGGTGCAGAACCCCGTGCTGC
TGGATTCGTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000016.1:89636..91296-

>ATCC64974_87050-T1 ID=ATCC64974_87050-T1|Name=ATCC64974_87050-T1|organism=Aspergillus niger N402|type=CDS|length=3210bp|location=Sequence derived from alignment at OGUI01000016.1:89636..91296- (Aspergillus niger N402)
CTTTCGGAGGAAACAAATCGAACATTGTGCTGGGTGGTCACTCCTCTGGC
GGTGTGCACGTCGACCACTACCTCTGGAACCACCCCGAGACCTTCCTTGC
CGGCGCCGTCGAGATGTCGGCCAATGCCGAGTCCGGTCCGGCCTATGCCC
CTACCGGCGTGGCCTTGGCTCAGGTCGTCGAGGACATGTTGGCTGCCGGC
GTGACACTCGGCTGCGATGCCAGCAACTACACGTTGGACTGCTTGCGCGA
GGCTGATACATATGCCTTCCAGACCAGCTACTTTAATTCCACCTCCAACA
CCTGGTTCTCCCCCATTGTCGACAACATCACTCGCTTCTCCAACTACACC
GACCGTTTTGCCCAGGGCTACTACCCCAAGTCCCTACCTCTGATGGTTGG
TAACTCTGACCAGGAGGGCCGTCTGTTTGCCTATGCCTATGCCTCCGAAA
ATACCAAATTCAACAAGTGGATCCACACCTTCGACGCGGATGTCGCCTGG
GTGCCGTCCGCGGAGCTCTTGGCTGCGTACAACAGCGCTGATTACTCGTC
TGTCTCCTTTGAGAGTGGCGCCTGCTACGGCGATGCCCGTTTCCTCTGCG
CGACCGACTACCTTGTCGACGTGCGCTCGAGCGAACAGCCCACTTGGATC
TACCGCTGGTTTGGTAACTACTCAAACGTGTTGGGCATCGCCGACATTGG
CCCTTCCCACGGCAGTGAGGTACCCTTCTTCCACGGTGGCAACGAGTGCT
TCTCCAAGTTAAGCGACGTCACCACGGCGGAACAGGAGCTAGCGGACTAC
ATGAACGACTGGTTTGTGGCCTGGATCAAGGCGCCCAGTGCCGGCCCCGG
ATGGGACAAAGCTCAACCCGTCAACGGTCCTCTGGCTCGCCTGGGAGTTC
CGGGCAACGAGCTGGCAATCGAGATGAGCACGACCGGTGCGTACAATGGA
CGCTGCCAGGCCGTATACAAGCCCAACTTTCCCAAGTATCCGGTGGTGCA
GAACCCCGTGCTGCTGGATTCGTAAATGGGCGTGATGCGCAAGACTGCTG
ACCAGGCCTTGGGCCTGACCGCCACCGCCCTGGCTCTGGTCAGTGCCGCC
CAGGCCACCTCCCCGTCCGTCACCGTCTCCCAGGGTCTCATCCGCGGCTT
TGAGCACAACGATACGAATGTCTTCCTGGGTATTCCGTTTGCCGAGACGA
CCGCTGGTGAGAACCGCTGGAAGGCCCCCAAGGCTCTGTCGTCCTTTGCC
GGAGGCGAGTTCAATGCCACCACCTATGGCCCCTCGTGCGCCCAGGCCAT
GTCTGGCACCGCCATCACGGCCCAGAGCGAAGACTGCCTCAGCATGAACA
TCTGGACTCCACTGAGCGGCAGTGACCTGCCCGTCTTCGTGTATGTCTAC
GGTGGAGCCATGGTTACTGGTGGCAGCAGCAATGCTCAATGGCAGGGCTA
CAACTTTGCCCGCAAGGATGTCATCTATGTCAACTTCAACTACCGCGAGA
GCATCTACGCTTCGCCTAATGCCCCGGAACTGGAAGGCCAGTCGCAGAAC
TTTGGCATCATGGATGTGGATTTGGCCGTGCAATGGGTCTATGACAACAT
CGAAGCTTTCGGAGGAAACAAATCGAACATTGTGCTGGGTGGTCACTCCT
CTGGCGGTGTGCACGTCGACCACTACCTCTGGAACCACCCCGAGACCTTC
CTTGCCGGCGCCGTCGAGATGTCGGCCAATGCCGAGTCCGGTCCGGCCTA
TGCCCCTACCGGCGTGGCCTTGGCTCAGGTCGTCGAGGACATGTTGGCTG
CCGGCGTGACACTCGGCTGCGATGCCAGCAACTACACGTTGGACTGCTTG
CGCGAGGCTGATACATATGCCTTCCAGACCAGCTACTTTAATTCCACCTC
CAACACCTGGTTCTCCCCCATTGTCGACAACATCACTCGCTTCTCCAACT
ACACCGACCGTTTTGCCCAGGGCTACTACCCCAAGTCCCTACCTCTGATG
GTTGGTAACTCTGACCAGGAGGGCCGTCTGTTTGCCTATGCCTATGCCTC
CGAAAATACCAAATTCAACAAGTGGATCCACACCTTCGACGCGGATGTCG
CCTGGGTGCCGTCCGCGGAGCTCTTGGCTGCGTACAACAGCGCTGATTAC
TCGTCTGTCTCCTTTGAGAGTGGCGCCTGCTACGGCGATGCCCGTTTCCT
CTGCGCGACCGACTACCTTGTCGACGTGCGCTCGAGCGAACAGCCCACTT
GGATCTACCGCTGGTTTGGTAACTACTCAAACGTGTTGGGCATCGCCGAC
ATTGGCCCTTCCCACGGCAGTGAGGTACCCTTCTTCCACGGTGGCAACGA
GTGCTTCTCCAAGTTAAGCGACGTCACCACGGCGGAACAGGAGCTAGCGG
ACTACATGAACGACTGGTTTGTGGCCTGGATCAAGGCGCCCAGTGCCGGC
CCCGGATGGGACAAAGCTCAACCCGTCAACGGTCCTCTGGCTCGCCTGGG
AGTTCCGGGCAACGAGCTGGCAATCGAGATGAGCACGACCGGTGCGTACA
ATGGACGCTGCCAGGCCGTATACAAGCCCAACTTTCCCAAGTATCCGGTG
GTGCAGAACCCCGTGCTGCTGGATTCGTAAATGGGCGTGATGCGCAAGAC
TGCTGACCAGGCCTTGGGCCTGACCGCCACCGCCCTGGCTCTGGTCAGTG
CCGCCCAGGCCACCTCCCCGTCCGTCACCGTCTCCCAGGGTCTCATCCGC
GGCTTTGAGCACAACGATACGAATGTCTTCCTGGGTATTCCGTTTGCCGA
GACGACCGCTGGTGAGAACCGCTGGAAGGCCCCCAAGGCTCTGTCGTCCT
TTGCCGGAGGCGAGTTCAATGCCACCACCTATGGCCCCTCGTGCGCCCAG
GCCATGTCTGGCACCGCCATCACGGCCCAGAGCGAAGACTGCCTCAGCAT
GAACATCTGGACTCCACTGAGCGGCAGTGACCTGCCCGTCTTCGTGTATG
TCTACGGTGGAGCCATGGTTACTGGTGGCAGCAGCAATGCTCAATGGCAG
GGCTACAACTTTGCCCGCAAGGATGTCATCTATGTCAACTTCAACTACCG
CGAGAGCATCTACGCTTCGCCTAATGCCCCGGAACTGGAAGGCCAGTCGC
AGAACTTTGGCATCATGGATGTGGATTTGGCCGTGCAATGGGTCTATGAC
AACATCGAAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_87050ATCC64974_87050Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_87050-T1ATCC64974_87050-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_87050-T1.cdsATCC64974_87050-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_87050-T1.exon2ATCC64974_87050-T1.exon2Aspergillus niger N402exon
ATCC64974_87050-T1.exon1ATCC64974_87050-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000161.1
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-27)
NoteMEROPS:MER0033198
NoteCAZy:CE10
DBxrefInterPro:IPR019826
DBxrefInterPro:IPR002018
DBxrefInterPro:IPR029058
DBxrefPFAM:PF00135
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:89636..91296 -
Powered by Drupal