You are here

Home

ATCC64974_87300-T1, ATCC64974_87300-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_87300-T1
Unique NameATCC64974_87300-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:164073..165726-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_87300-T1 ID=ATCC64974_87300-T1|Name=ATCC64974_87300-T1|organism=Aspergillus niger N402|type=mRNA|length=1654bp|location=Sequence derived from alignment at OGUI01000016.1:164073..165726- (Aspergillus niger N402)
ATGACAGAAGATGTATCCTTGGGCACCGACATGGCTCGCTCTGACACACT
GAAGAAGAACGGTCATGAAGAGGTTCATCTTGAGAATGTATCTCCAACGC
CACCTGGCCAACAGCCAAACAGGAGCCTTTGGACAGATCCTTCTCCCACC
AACCCTCAAAACTGGCCTGTCTGGAAGAAGAATGCCCATATCCTGATGGT
GGCGTTTCATTCGATGGCCGCAACCTTCATGGCGGCCGGCATTATACCGG
CCTACGACATCATGGCTGAAAGGTACAACATAACGGTGCCACAAGCCAGT
TATCTCACCTCCGTTCAAGTACGTGATATCTATCGTTTACTCAGCGCTTC
CTCCACAGGGTCAATTCCTCCCCTTTAGTATTGGACGTACCGCCTGACTC
ACATTCGATCATCTGTACAGATCTTGCTCTTAGGAATTTGTCCCCTTTTC
TGGAGACCGATTGCCAACACCTACGGACGATACCATGTATTCCTGTTTTC
GGTCCTTGGAAGTATGGTCTGCAATATCGGTGGAGCTCGCTGTACTACAT
ACGGGACACAAATGGCCACTCGAGTACTCGCCGCAATCCTCATTTCTCCC
CCTATTGGAATAGGCAGTGGTGTGATCACGGAGCTGTGTGAGCCAGAGAA
ACGAGCGCAAAAGCTTGGGTGGTGGACACTCATGTTGACGCTTGGAACTC
CAGGTGGGCCATTTATTATGGGTTTTGTTACAAAGCGAATTGGGTTTGAG
TGGATCTATTGGATATTCGCCATGATGAACTTCGGGCAGTTCATCGCTTA
CCTGCTCTTGGGTGACGAAACGCTGTACATTCCGACCGACGGCGATACTC
ATGATGCAGGCGTGGCTAGATCTCGCTTCGTCCAGAAGTTCATCCCTCGC
CGGATCAACCCGCGTCCGCTTAAGCTTCGCGAATTCATCGAGCCACTTCT
CTTTACGAGGCTTCCTAGGGTGCTGATTCCTGCATGCGCTCATTCTATAG
TGTTCTGTTATGGAAACATTGCTTTGATTGTCGAAATGCCAATTGCTTTT
GGCGAGAAGTTCGACTTCGATTCGCAGCAAATTGGTCTGCAATTCATTGC
TATCATTATCGGGTGTGTCCTTGGTGAGCAGTTGAGTGGCCCTATGTCAG
ACCGGTTTCTGCAAGCCATGCATAGAAGAAGAGGATACCACCGGCCCGCA
GACAGGCTATGGCTCTCATACATTGGCTTTGCGACTGTCATTGCTGGCCT
TTTCGTATGGGGCTTTCAGCTACAGAAGGCTACCAGCTGGAACGTGACCC
CATGCGTCGGCGCCGCAATCGCCAGCTTTGGAAACCAAATCATAACGACA
ATCCTTATTTCGTTCGCTGTTGACAGCTATAAGGAAGCATCGACTAGTGT
CGGCGTCTGCATCAACGTGTTTCGACATGTGTATGGTTTTGTAAGTCAAA
GAGCAGACAGCGTTAGTGGTTCCTTGCTGATGGTTTTAGATCGGTCCATT
TTATTTCCCTGACATGTTCGAGACGTTGGGTCTGGGCGGTGCAGCTGGCG
TCATGTGTGCTATCATTGGGGTCTGCGCACTGCCCTCGATCATTGCCATA
CATTTCGTTGCTACGCGCGCAGATCAGAAGACGCAAGATGTTGTTACGGA
TTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000016.1:164073..165726-

>ATCC64974_87300-T1 ID=ATCC64974_87300-T1|Name=ATCC64974_87300-T1|organism=Aspergillus niger N402|type=CDS|length=4509bp|location=Sequence derived from alignment at OGUI01000016.1:164073..165726- (Aspergillus niger N402)
ATCGGTCCATTTTATTTCCCTGACATGTTCGAGACGTTGGGTCTGGGCGG
TGCAGCTGGCGTCATGTGTGCTATCATTGGGGTCTGCGCACTGCCCTCGA
TCATTGCCATACATTTCGTTGCTACGCGCGCAGATCAGAAGACGCAAGAT
GTTGTTACGGATTAAATCTTGCTCTTAGGAATTTGTCCCCTTTTCTGGAG
ACCGATTGCCAACACCTACGGACGATACCATGTATTCCTGTTTTCGGTCC
TTGGAAGTATGGTCTGCAATATCGGTGGAGCTCGCTGTACTACATACGGG
ACACAAATGGCCACTCGAGTACTCGCCGCAATCCTCATTTCTCCCCCTAT
TGGAATAGGCAGTGGTGTGATCACGGAGCTGTGTGAGCCAGAGAAACGAG
CGCAAAAGCTTGGGTGGTGGACACTCATGTTGACGCTTGGAACTCCAGGT
GGGCCATTTATTATGGGTTTTGTTACAAAGCGAATTGGGTTTGAGTGGAT
CTATTGGATATTCGCCATGATGAACTTCGGGCAGTTCATCGCTTACCTGC
TCTTGGGTGACGAAACGCTGTACATTCCGACCGACGGCGATACTCATGAT
GCAGGCGTGGCTAGATCTCGCTTCGTCCAGAAGTTCATCCCTCGCCGGAT
CAACCCGCGTCCGCTTAAGCTTCGCGAATTCATCGAGCCACTTCTCTTTA
CGAGGCTTCCTAGGGTGCTGATTCCTGCATGCGCTCATTCTATAGTGTTC
TGTTATGGAAACATTGCTTTGATTGTCGAAATGCCAATTGCTTTTGGCGA
GAAGTTCGACTTCGATTCGCAGCAAATTGGTCTGCAATTCATTGCTATCA
TTATCGGGTGTGTCCTTGGTGAGCAGTTGAGTGGCCCTATGTCAGACCGG
TTTCTGCAAGCCATGCATAGAAGAAGAGGATACCACCGGCCCGCAGACAG
GCTATGGCTCTCATACATTGGCTTTGCGACTGTCATTGCTGGCCTTTTCG
TATGGGGCTTTCAGCTACAGAAGGCTACCAGCTGGAACGTGACCCCATGC
GTCGGCGCCGCAATCGCCAGCTTTGGAAACCAAATCATAACGACAATCCT
TATTTCGTTCGCTGTTGACAGCTATAAGGAAGCATCGACTAGTGTCGGCG
TCTGCATCAACGTGTTTCGACATGTGTATGGTTTTATGACAGAAGATGTA
TCCTTGGGCACCGACATGGCTCGCTCTGACACACTGAAGAAGAACGGTCA
TGAAGAGGTTCATCTTGAGAATGTATCTCCAACGCCACCTGGCCAACAGC
CAAACAGGAGCCTTTGGACAGATCCTTCTCCCACCAACCCTCAAAACTGG
CCTGTCTGGAAGAAGAATGCCCATATCCTGATGGTGGCGTTTCATTCGAT
GGCCGCAACCTTCATGGCGGCCGGCATTATACCGGCCTACGACATCATGG
CTGAAAGGTACAACATAACGGTGCCACAAGCCAGTTATCTCACCTCCGTT
CAAATCGGTCCATTTTATTTCCCTGACATGTTCGAGACGTTGGGTCTGGG
CGGTGCAGCTGGCGTCATGTGTGCTATCATTGGGGTCTGCGCACTGCCCT
CGATCATTGCCATACATTTCGTTGCTACGCGCGCAGATCAGAAGACGCAA
GATGTTGTTACGGATTAAATCTTGCTCTTAGGAATTTGTCCCCTTTTCTG
GAGACCGATTGCCAACACCTACGGACGATACCATGTATTCCTGTTTTCGG
TCCTTGGAAGTATGGTCTGCAATATCGGTGGAGCTCGCTGTACTACATAC
GGGACACAAATGGCCACTCGAGTACTCGCCGCAATCCTCATTTCTCCCCC
TATTGGAATAGGCAGTGGTGTGATCACGGAGCTGTGTGAGCCAGAGAAAC
GAGCGCAAAAGCTTGGGTGGTGGACACTCATGTTGACGCTTGGAACTCCA
GGTGGGCCATTTATTATGGGTTTTGTTACAAAGCGAATTGGGTTTGAGTG
GATCTATTGGATATTCGCCATGATGAACTTCGGGCAGTTCATCGCTTACC
TGCTCTTGGGTGACGAAACGCTGTACATTCCGACCGACGGCGATACTCAT
GATGCAGGCGTGGCTAGATCTCGCTTCGTCCAGAAGTTCATCCCTCGCCG
GATCAACCCGCGTCCGCTTAAGCTTCGCGAATTCATCGAGCCACTTCTCT
TTACGAGGCTTCCTAGGGTGCTGATTCCTGCATGCGCTCATTCTATAGTG
TTCTGTTATGGAAACATTGCTTTGATTGTCGAAATGCCAATTGCTTTTGG
CGAGAAGTTCGACTTCGATTCGCAGCAAATTGGTCTGCAATTCATTGCTA
TCATTATCGGGTGTGTCCTTGGTGAGCAGTTGAGTGGCCCTATGTCAGAC
CGGTTTCTGCAAGCCATGCATAGAAGAAGAGGATACCACCGGCCCGCAGA
CAGGCTATGGCTCTCATACATTGGCTTTGCGACTGTCATTGCTGGCCTTT
TCGTATGGGGCTTTCAGCTACAGAAGGCTACCAGCTGGAACGTGACCCCA
TGCGTCGGCGCCGCAATCGCCAGCTTTGGAAACCAAATCATAACGACAAT
CCTTATTTCGTTCGCTGTTGACAGCTATAAGGAAGCATCGACTAGTGTCG
GCGTCTGCATCAACGTGTTTCGACATGTGTATGGTTTTATGACAGAAGAT
GTATCCTTGGGCACCGACATGGCTCGCTCTGACACACTGAAGAAGAACGG
TCATGAAGAGGTTCATCTTGAGAATGTATCTCCAACGCCACCTGGCCAAC
AGCCAAACAGGAGCCTTTGGACAGATCCTTCTCCCACCAACCCTCAAAAC
TGGCCTGTCTGGAAGAAGAATGCCCATATCCTGATGGTGGCGTTTCATTC
GATGGCCGCAACCTTCATGGCGGCCGGCATTATACCGGCCTACGACATCA
TGGCTGAAAGGTACAACATAACGGTGCCACAAGCCAGTTATCTCACCTCC
GTTCAAATCGGTCCATTTTATTTCCCTGACATGTTCGAGACGTTGGGTCT
GGGCGGTGCAGCTGGCGTCATGTGTGCTATCATTGGGGTCTGCGCACTGC
CCTCGATCATTGCCATACATTTCGTTGCTACGCGCGCAGATCAGAAGACG
CAAGATGTTGTTACGGATTAAATCTTGCTCTTAGGAATTTGTCCCCTTTT
CTGGAGACCGATTGCCAACACCTACGGACGATACCATGTATTCCTGTTTT
CGGTCCTTGGAAGTATGGTCTGCAATATCGGTGGAGCTCGCTGTACTACA
TACGGGACACAAATGGCCACTCGAGTACTCGCCGCAATCCTCATTTCTCC
CCCTATTGGAATAGGCAGTGGTGTGATCACGGAGCTGTGTGAGCCAGAGA
AACGAGCGCAAAAGCTTGGGTGGTGGACACTCATGTTGACGCTTGGAACT
CCAGGTGGGCCATTTATTATGGGTTTTGTTACAAAGCGAATTGGGTTTGA
GTGGATCTATTGGATATTCGCCATGATGAACTTCGGGCAGTTCATCGCTT
ACCTGCTCTTGGGTGACGAAACGCTGTACATTCCGACCGACGGCGATACT
CATGATGCAGGCGTGGCTAGATCTCGCTTCGTCCAGAAGTTCATCCCTCG
CCGGATCAACCCGCGTCCGCTTAAGCTTCGCGAATTCATCGAGCCACTTC
TCTTTACGAGGCTTCCTAGGGTGCTGATTCCTGCATGCGCTCATTCTATA
GTGTTCTGTTATGGAAACATTGCTTTGATTGTCGAAATGCCAATTGCTTT
TGGCGAGAAGTTCGACTTCGATTCGCAGCAAATTGGTCTGCAATTCATTG
CTATCATTATCGGGTGTGTCCTTGGTGAGCAGTTGAGTGGCCCTATGTCA
GACCGGTTTCTGCAAGCCATGCATAGAAGAAGAGGATACCACCGGCCCGC
AGACAGGCTATGGCTCTCATACATTGGCTTTGCGACTGTCATTGCTGGCC
TTTTCGTATGGGGCTTTCAGCTACAGAAGGCTACCAGCTGGAACGTGACC
CCATGCGTCGGCGCCGCAATCGCCAGCTTTGGAAACCAAATCATAACGAC
AATCCTTATTTCGTTCGCTGTTGACAGCTATAAGGAAGCATCGACTAGTG
TCGGCGTCTGCATCAACGTGTTTCGACATGTGTATGGTTTTATGACAGAA
GATGTATCCTTGGGCACCGACATGGCTCGCTCTGACACACTGAAGAAGAA
CGGTCATGAAGAGGTTCATCTTGAGAATGTATCTCCAACGCCACCTGGCC
AACAGCCAAACAGGAGCCTTTGGACAGATCCTTCTCCCACCAACCCTCAA
AACTGGCCTGTCTGGAAGAAGAATGCCCATATCCTGATGGTGGCGTTTCA
TTCGATGGCCGCAACCTTCATGGCGGCCGGCATTATACCGGCCTACGACA
TCATGGCTGAAAGGTACAACATAACGGTGCCACAAGCCAGTTATCTCACC
TCCGTTCAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_87300ATCC64974_87300Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_87300-T1ATCC64974_87300-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_87300-T1.cdsATCC64974_87300-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_87300-T1.exon3ATCC64974_87300-T1.exon3Aspergillus niger N402exon
ATCC64974_87300-T1.exon2ATCC64974_87300-T1.exon2Aspergillus niger N402exon
ATCC64974_87300-T1.exon1ATCC64974_87300-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:164073..165726 -
Powered by Drupal