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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000016.1:190598..191323- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_87420-T1 ID=ATCC64974_87420-T1|Name=ATCC64974_87420-T1|organism=Aspergillus niger N402|type=mRNA|length=726bp|location=Sequence derived from alignment at OGUI01000016.1:190598..191323- (Aspergillus niger N402)
ATGGTCCGCCTAAAACACCGCTACATCCTCCTCGACATCCTCTACCCCGA
TCCCTCAACATGGCCCCCAGCCGCCTCCCGCACCAATAAGAACCCTCTAT
CCAAATCAAAGTCGCAAGCACAGCTACAAATCCATTCGCCCACATCCGAT
GCCCTAACACCGGGCCTGCTAGCGAAAATGGTCAGAGAGGAAGTCTCACT
CATGTTTGGCGATTACGGCGTCGGTAGATTGGGTGGTGCGGGCGCGGGGG
GTATTAGTGGTATGTTTTCCTTCTCCTCTAGCTCTATTCCTCTTTGAATT
GGGTTTTTTTGCCTGCTGGGTTGTGATAATGAGACTAATTACTTGTTTGA
TGAATATCCAGTGAAATACCTCTCCCCTGCTACTTCGACGGCTATTATTC
GGTGTCCTCGCGCGTCGTTCCGGCTTGTGTGGACGGCGCTGACCTGCATG
TCGCAGGTTCCGGGGTTTAGTGAGGGTGGGTCGAAGAGGACGACGAGAGC
TTGTGTGTTTCGGGTTATTAGGGTGTCCGGGACGATGCGGAAGGCGGAGG
AGGAGGCGATTCGGAGGGCGAGGAGGGAGATTGTGCGGTTGAGGGAGGCG
GAGGAGAGTGGGGTTTTGGAGGGGTTGTTGGGGGGTTTAGTGGATGTGGC
TGGGGAGGAGAGTACGCCGGTTACTGGGGAGGATGTGGTTGGGGATGTGA
TGATGGAGAGTGAGGATGATGATTGA back to topCoding sequence (CDS) from alignment at OGUI01000016.1:190598..191323- >ATCC64974_87420-T1 ID=ATCC64974_87420-T1|Name=ATCC64974_87420-T1|organism=Aspergillus niger N402|type=CDS|length=1248bp|location=Sequence derived from alignment at OGUI01000016.1:190598..191323- (Aspergillus niger N402)
TGAAATACCTCTCCCCTGCTACTTCGACGGCTATTATTCGGTGTCCTCGC
GCGTCGTTCCGGCTTGTGTGGACGGCGCTGACCTGCATGTCGCAGGTTCC
GGGGTTTAGTGAGGGTGGGTCGAAGAGGACGACGAGAGCTTGTGTGTTTC
GGGTTATTAGGGTGTCCGGGACGATGCGGAAGGCGGAGGAGGAGGCGATT
CGGAGGGCGAGGAGGGAGATTGTGCGGTTGAGGGAGGCGGAGGAGAGTGG
GGTTTTGGAGGGGTTGTTGGGGGGTTTAGTGGATGTGGCTGGGGAGGAGA
GTACGCCGGTTACTGGGGAGGATGTGGTTGGGGATGTGATGATGGAGAGT
GAGGATGATGATTGAATGGTCCGCCTAAAACACCGCTACATCCTCCTCGA
CATCCTCTACCCCGATCCCTCAACATGGCCCCCAGCCGCCTCCCGCACCA
ATAAGAACCCTCTATCCAAATCAAAGTCGCAAGCACAGCTACAAATCCAT
TCGCCCACATCCGATGCCCTAACACCGGGCCTGCTAGCGAAAATGGTCAG
AGAGGAAGTCTCACTCATGTTTGGCGATTACGGCGTCGGTAGATTGGGTG
GTGCGGGCGCGGGGGGTATTAGTGTGAAATACCTCTCCCCTGCTACTTCG
ACGGCTATTATTCGGTGTCCTCGCGCGTCGTTCCGGCTTGTGTGGACGGC
GCTGACCTGCATGTCGCAGGTTCCGGGGTTTAGTGAGGGTGGGTCGAAGA
GGACGACGAGAGCTTGTGTGTTTCGGGTTATTAGGGTGTCCGGGACGATG
CGGAAGGCGGAGGAGGAGGCGATTCGGAGGGCGAGGAGGGAGATTGTGCG
GTTGAGGGAGGCGGAGGAGAGTGGGGTTTTGGAGGGGTTGTTGGGGGGTT
TAGTGGATGTGGCTGGGGAGGAGAGTACGCCGGTTACTGGGGAGGATGTG
GTTGGGGATGTGATGATGGAGAGTGAGGATGATGATTGAATGGTCCGCCT
AAAACACCGCTACATCCTCCTCGACATCCTCTACCCCGATCCCTCAACAT
GGCCCCCAGCCGCCTCCCGCACCAATAAGAACCCTCTATCCAAATCAAAG
TCGCAAGCACAGCTACAAATCCATTCGCCCACATCCGATGCCCTAACACC
GGGCCTGCTAGCGAAAATGGTCAGAGAGGAAGTCTCACTCATGTTTGGCG
ATTACGGCGTCGGTAGATTGGGTGGTGCGGGCGCGGGGGGTATTAGTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008033 | tRNA processing |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004540 | ribonuclease activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_87420-T1 | ATCC64974_87420-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002759 |
| DBxref | InterPro:IPR038085 |
| DBxref | PFAM:PF01900 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000016.1 | supercontig | OGUI01000016.1:190598..191323 - |
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