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ATCC64974_87650-T1, ATCC64974_87650-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_87650-T1
Unique NameATCC64974_87650-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:250978..251362-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_87650-T1 ID=ATCC64974_87650-T1|Name=ATCC64974_87650-T1|organism=Aspergillus niger N402|type=mRNA|length=385bp|location=Sequence derived from alignment at OGUI01000016.1:250978..251362- (Aspergillus niger N402)
ATGTCCGCTTCAAATCCCCCCTCACAGTCCGAATACGTGACCCTAGTATC
CGGTGATGGATTCGAATTCGTCATCCCGCGCAGCACAGCCTGCGTGTCGG
GGACGATACGTCGCATGTTAGAGCCGTCTAGTGAGTCTTGTCTCCTCACA
TGTGTGTTTCAGTGGTGGCACTTGCTAACAACTCCATTACTATATAGGTC
GCTTCTCGGAATCCGTTACCGGTCGATGCGTCCTCGAGAATATTAGCGGT
ATTGTGCTTGAAAAAGTATGCGAGTATTTCTGCTACAATGAGAAGAATAA
GAACCAGACATATGTTCCGGATATGGATATCCCGCCGGAGTTGTGTTTGG
AATTGTTGATGGCGGCGGATTATTTGGATGCGTGA
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Coding sequence (CDS) from alignment at OGUI01000016.1:250978..251362-

>ATCC64974_87650-T1 ID=ATCC64974_87650-T1|Name=ATCC64974_87650-T1|organism=Aspergillus niger N402|type=CDS|length=636bp|location=Sequence derived from alignment at OGUI01000016.1:250978..251362- (Aspergillus niger N402)
GTCGCTTCTCGGAATCCGTTACCGGTCGATGCGTCCTCGAGAATATTAGC
GGTATTGTGCTTGAAAAAGTATGCGAGTATTTCTGCTACAATGAGAAGAA
TAAGAACCAGACATATGTTCCGGATATGGATATCCCGCCGGAGTTGTGTT
TGGAATTGTTGATGGCGGCGGATTATTTGGATGCGTGAATGTCCGCTTCA
AATCCCCCCTCACAGTCCGAATACGTGACCCTAGTATCCGGTGATGGATT
CGAATTCGTCATCCCGCGCAGCACAGCCTGCGTGTCGGGGACGATACGTC
GCATGTTAGAGCCGTCTAGTCGCTTCTCGGAATCCGTTACCGGTCGATGC
GTCCTCGAGAATATTAGCGGTATTGTGCTTGAAAAAGTATGCGAGTATTT
CTGCTACAATGAGAAGAATAAGAACCAGACATATGTTCCGGATATGGATA
TCCCGCCGGAGTTGTGTTTGGAATTGTTGATGGCGGCGGATTATTTGGAT
GCGTGAATGTCCGCTTCAAATCCCCCCTCACAGTCCGAATACGTGACCCT
AGTATCCGGTGATGGATTCGAATTCGTCATCCCGCGCAGCACAGCCTGCG
TGTCGGGGACGATACGTCGCATGTTAGAGCCGTCTA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_87650ATCC64974_87650Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_87650-T1ATCC64974_87650-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_87650-T1.cdsATCC64974_87650-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_87650-T1.exon2ATCC64974_87650-T1.exon2Aspergillus niger N402exon
ATCC64974_87650-T1.exon1ATCC64974_87650-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09265QTV
DBxrefInterPro:IPR011333
DBxrefInterPro:IPR016073
DBxrefInterPro:IPR001232
DBxrefPFAM:PF03931
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:250978..251362 -
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