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ATCC64974_8810-T1, ATCC64974_8810-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_8810-T1
Unique NameATCC64974_8810-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000002.1:420614..421829-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_8810-T1 ID=ATCC64974_8810-T1|Name=ATCC64974_8810-T1|organism=Aspergillus niger N402|type=mRNA|length=1216bp|location=Sequence derived from alignment at OGUI01000002.1:420614..421829- (Aspergillus niger N402)
ATGGATAACGCAAACCTCTGGACTCGCCGATCCAAGTACGTCCCACTCCG
ACACGATGACTTTGCCCGCATGCTTGTGTGGCTGATGCGACTCAACTAAC
CTGTTTAATCTTTTGTTCCTATCTATAGCACCTCCAAGTTGTCTCTGTCT
ATGACGGGGACGGACGGCGCTCGAGTTGAACTTCCCCGCGCCACCAAGCG
TTTCGGCCCCGACAGCTCCCACGGCGGCCGGTCCAACCCTTTCAACGCCC
TCTCCCCCCTCTCCGGCGGCGTGTCCTCTCCGTCTACAAACGCCTCCTCT
GCATTCGGCCTGGGCTCCGGTGCCTTTGCGTCGTTTGGAACCCCCAAAAC
CCCCGGTGCACCTTCCGACCTGAAAACTCCCGGCGAGAAGCGTGAAAACC
CTGTCGACCAGGTTTCCGCTGCTGAGGCCGGCAAACCTAAGGGCGCTGCC
TTGACGCTCAAGGAGCACCCGCTCAAGTCCACTTGGATTATCTGGTACCG
GCCTCCCACACCTAAATACTCCGATTACGAAAAGTCTACCGCTCCGCTTG
CATCCATATCATCAGTAGAGAGTTTCTGGTCGATCTATTCGCACCTAAAG
AGGCCCTCTCTGCTCCCCACAGTCTCCGACTACCATATCTTCAAAAAGGG
CATCCGTCCGGTATGGGAGGACGAGGCCAATAAGAGAGGTGGAAAATGGG
TGGTGAGGCTGAAGAAGGGGGTTGCGGATCGCTACTGGGAGGATCTCCTC
CTGGCTATGATCGGTGACCAGTTTGCAGAGGCTAGTGATGAGGTTTGTGG
TGCGGTGCTCAGTGTGCGGAGCGGGGAGGATGTTCTGAATGTGTGGACCC
GCATCGATGGCGGGCGGAACATCAAGATCAGGTATGTCATACGTGGACAC
ATCCCGTTGGAAGTGACATCGCAAGTTTACTAACGTGTTCTGCAGAGAGA
CAATCAAACGTCTGCTGAACTTCCCGGCCGACACCAATATCGTCTGGAAG
AGTCATGACGACAGTATCGCCCAACGTTCGGCCATCGACCAGGCTCGCCA
GGAGAAGGCCGCCGGAAACGCCGGTCATCACCACCATCACCATCACCATC
ACCACCACAACAACAACAACAACAACCACAATCACAACCAGCAAAACCAG
CTGGGCGATCGACGAAGAGTTACGGCGAATGACGAGGGGGATAAAGGAAA
AGGCACGACATCTTGA
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Coding sequence (CDS) from alignment at OGUI01000002.1:420614..421829-

>ATCC64974_8810-T1 ID=ATCC64974_8810-T1|Name=ATCC64974_8810-T1|organism=Aspergillus niger N402|type=CDS|length=3177bp|location=Sequence derived from alignment at OGUI01000002.1:420614..421829- (Aspergillus niger N402)
AGAGACAATCAAACGTCTGCTGAACTTCCCGGCCGACACCAATATCGTCT
GGAAGAGTCATGACGACAGTATCGCCCAACGTTCGGCCATCGACCAGGCT
CGCCAGGAGAAGGCCGCCGGAAACGCCGGTCATCACCACCATCACCATCA
CCATCACCACCACAACAACAACAACAACAACCACAATCACAACCAGCAAA
ACCAGCTGGGCGATCGACGAAGAGTTACGGCGAATGACGAGGGGGATAAA
GGAAAAGGCACGACATCTTGACACCTCCAAGTTGTCTCTGTCTATGACGG
GGACGGACGGCGCTCGAGTTGAACTTCCCCGCGCCACCAAGCGTTTCGGC
CCCGACAGCTCCCACGGCGGCCGGTCCAACCCTTTCAACGCCCTCTCCCC
CCTCTCCGGCGGCGTGTCCTCTCCGTCTACAAACGCCTCCTCTGCATTCG
GCCTGGGCTCCGGTGCCTTTGCGTCGTTTGGAACCCCCAAAACCCCCGGT
GCACCTTCCGACCTGAAAACTCCCGGCGAGAAGCGTGAAAACCCTGTCGA
CCAGGTTTCCGCTGCTGAGGCCGGCAAACCTAAGGGCGCTGCCTTGACGC
TCAAGGAGCACCCGCTCAAGTCCACTTGGATTATCTGGTACCGGCCTCCC
ACACCTAAATACTCCGATTACGAAAAGTCTACCGCTCCGCTTGCATCCAT
ATCATCAGTAGAGAGTTTCTGGTCGATCTATTCGCACCTAAAGAGGCCCT
CTCTGCTCCCCACAGTCTCCGACTACCATATCTTCAAAAAGGGCATCCGT
CCGGTATGGGAGGACGAGGCCAATAAGAGAGGTGGAAAATGGGTGGTGAG
GCTGAAGAAGGGGGTTGCGGATCGCTACTGGGAGGATCTCCTCCTGGCTA
TGATCGGTGACCAGTTTGCAGAGGCTAGTGATGAGGTTTGTGGTGCGGTG
CTCAGTGTGCGGAGCGGGGAGGATGTTCTGAATGTGTGGACCCGCATCGA
TGGCGGGCGGAACATCAAGATCAGATGGATAACGCAAACCTCTGGACTCG
CCGATCCAAAGAGACAATCAAACGTCTGCTGAACTTCCCGGCCGACACCA
ATATCGTCTGGAAGAGTCATGACGACAGTATCGCCCAACGTTCGGCCATC
GACCAGGCTCGCCAGGAGAAGGCCGCCGGAAACGCCGGTCATCACCACCA
TCACCATCACCATCACCACCACAACAACAACAACAACAACCACAATCACA
ACCAGCAAAACCAGCTGGGCGATCGACGAAGAGTTACGGCGAATGACGAG
GGGGATAAAGGAAAAGGCACGACATCTTGACACCTCCAAGTTGTCTCTGT
CTATGACGGGGACGGACGGCGCTCGAGTTGAACTTCCCCGCGCCACCAAG
CGTTTCGGCCCCGACAGCTCCCACGGCGGCCGGTCCAACCCTTTCAACGC
CCTCTCCCCCCTCTCCGGCGGCGTGTCCTCTCCGTCTACAAACGCCTCCT
CTGCATTCGGCCTGGGCTCCGGTGCCTTTGCGTCGTTTGGAACCCCCAAA
ACCCCCGGTGCACCTTCCGACCTGAAAACTCCCGGCGAGAAGCGTGAAAA
CCCTGTCGACCAGGTTTCCGCTGCTGAGGCCGGCAAACCTAAGGGCGCTG
CCTTGACGCTCAAGGAGCACCCGCTCAAGTCCACTTGGATTATCTGGTAC
CGGCCTCCCACACCTAAATACTCCGATTACGAAAAGTCTACCGCTCCGCT
TGCATCCATATCATCAGTAGAGAGTTTCTGGTCGATCTATTCGCACCTAA
AGAGGCCCTCTCTGCTCCCCACAGTCTCCGACTACCATATCTTCAAAAAG
GGCATCCGTCCGGTATGGGAGGACGAGGCCAATAAGAGAGGTGGAAAATG
GGTGGTGAGGCTGAAGAAGGGGGTTGCGGATCGCTACTGGGAGGATCTCC
TCCTGGCTATGATCGGTGACCAGTTTGCAGAGGCTAGTGATGAGGTTTGT
GGTGCGGTGCTCAGTGTGCGGAGCGGGGAGGATGTTCTGAATGTGTGGAC
CCGCATCGATGGCGGGCGGAACATCAAGATCAGATGGATAACGCAAACCT
CTGGACTCGCCGATCCAAAGAGACAATCAAACGTCTGCTGAACTTCCCGG
CCGACACCAATATCGTCTGGAAGAGTCATGACGACAGTATCGCCCAACGT
TCGGCCATCGACCAGGCTCGCCAGGAGAAGGCCGCCGGAAACGCCGGTCA
TCACCACCATCACCATCACCATCACCACCACAACAACAACAACAACAACC
ACAATCACAACCAGCAAAACCAGCTGGGCGATCGACGAAGAGTTACGGCG
AATGACGAGGGGGATAAAGGAAAAGGCACGACATCTTGACACCTCCAAGT
TGTCTCTGTCTATGACGGGGACGGACGGCGCTCGAGTTGAACTTCCCCGC
GCCACCAAGCGTTTCGGCCCCGACAGCTCCCACGGCGGCCGGTCCAACCC
TTTCAACGCCCTCTCCCCCCTCTCCGGCGGCGTGTCCTCTCCGTCTACAA
ACGCCTCCTCTGCATTCGGCCTGGGCTCCGGTGCCTTTGCGTCGTTTGGA
ACCCCCAAAACCCCCGGTGCACCTTCCGACCTGAAAACTCCCGGCGAGAA
GCGTGAAAACCCTGTCGACCAGGTTTCCGCTGCTGAGGCCGGCAAACCTA
AGGGCGCTGCCTTGACGCTCAAGGAGCACCCGCTCAAGTCCACTTGGATT
ATCTGGTACCGGCCTCCCACACCTAAATACTCCGATTACGAAAAGTCTAC
CGCTCCGCTTGCATCCATATCATCAGTAGAGAGTTTCTGGTCGATCTATT
CGCACCTAAAGAGGCCCTCTCTGCTCCCCACAGTCTCCGACTACCATATC
TTCAAAAAGGGCATCCGTCCGGTATGGGAGGACGAGGCCAATAAGAGAGG
TGGAAAATGGGTGGTGAGGCTGAAGAAGGGGGTTGCGGATCGCTACTGGG
AGGATCTCCTCCTGGCTATGATCGGTGACCAGTTTGCAGAGGCTAGTGAT
GAGGTTTGTGGTGCGGTGCTCAGTGTGCGGAGCGGGGAGGATGTTCTGAA
TGTGTGGACCCGCATCGATGGCGGGCGGAACATCAAGATCAGATGGATAA
CGCAAACCTCTGGACTCGCCGATCCAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_8810ATCC64974_8810Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_8810-T1ATCC64974_8810-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_8810-T1.cdsATCC64974_8810-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_8810-T1.exon3ATCC64974_8810-T1.exon3Aspergillus niger N402exon
ATCC64974_8810-T1.exon2ATCC64974_8810-T1.exon2Aspergillus niger N402exon
ATCC64974_8810-T1.exon1ATCC64974_8810-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000021.4
DBxrefInterPro:IPR019770
DBxrefInterPro:IPR023398
DBxrefInterPro:IPR001040
DBxrefPFAM:PF01652
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000002.1supercontigOGUI01000002.1:420614..421829 -
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