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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000016.1:405177..405881- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_88150-T1 ID=ATCC64974_88150-T1|Name=ATCC64974_88150-T1|organism=Aspergillus niger N402|type=mRNA|length=705bp|location=Sequence derived from alignment at OGUI01000016.1:405177..405881- (Aspergillus niger N402)
ATGGCCCAACAAGGGTCTGGGAAACCTTTTCGTCCCATTGCCCCTAGGAG
GATACCAGAGCCTCCAACCCCGGCCGCTGCGCCCGAGGAGGGGAAAATAA
AGCGAGCTTCCACGGCTTGCGGGGAATGTAAACGACGTCGAACGAAGGTG
AAAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCGGTTGCCTTT
CCTTTATAATGCATCACAATGATTCATCCAGCCAACCCCCCCTCCCCTTT
CCCCCCCTCCCCTTTCCCCCCCTCCTCCCCCACCCGTTAAGTTCCTTTAT
CCTCCCCCTCTTTCTGTTCTGACCCGGGTGGTGGTATCACAGTGTAGTGC
AGATACAACAGGGACGCCGTGCGCTGAATGTGCTCTCCACGACCGGGAGT
GCGTGATCGATGAATTCGCCGACAAACGACGCAAGGTAGCGGCCAAGCGT
GCCCAGGAGGATCTAAAATATTACCGTGGCTTTGTGGAACAACTTCTTGA
GGCGCTGCGATCTAGTGATTGTGCCACCATCGATGGTATTCTCGACGTCA
TCCGGTCGGGCGCAACTCATGATGAAATCCGGGCGGTTCTTGCTCGCTCC
GCGCCGAAGGCTGAGATTAATATCCCCGACGGAGTAGATTCCGTGGTGAC
AGACGGCAACAACAGCCCGCCGGCGAGCTCCAAGCCGGATGGCCTACCCG
AATGA back to topCoding sequence (CDS) from alignment at OGUI01000016.1:405177..405881- >ATCC64974_88150-T1 ID=ATCC64974_88150-T1|Name=ATCC64974_88150-T1|organism=Aspergillus niger N402|type=CDS|length=1020bp|location=Sequence derived from alignment at OGUI01000016.1:405177..405881- (Aspergillus niger N402)
TGTAGTGCAGATACAACAGGGACGCCGTGCGCTGAATGTGCTCTCCACGA
CCGGGAGTGCGTGATCGATGAATTCGCCGACAAACGACGCAAGGTAGCGG
CCAAGCGTGCCCAGGAGGATCTAAAATATTACCGTGGCTTTGTGGAACAA
CTTCTTGAGGCGCTGCGATCTAGTGATTGTGCCACCATCGATGGTATTCT
CGACGTCATCCGGTCGGGCGCAACTCATGATGAAATCCGGGCGGTTCTTG
CTCGCTCCGCGCCGAAGGCTGAGATTAATATCCCCGACGGAGTAGATTCC
GTGGTGACAGACGGCAACAACAGCCCGCCGGCGAGCTCCAAGCCGGATGG
CCTACCCGAATGAATGGCCCAACAAGGGTCTGGGAAACCTTTTCGTCCCA
TTGCCCCTAGGAGGATACCAGAGCCTCCAACCCCGGCCGCTGCGCCCGAG
GAGGGGAAAATAAAGCGAGCTTCCACGGCTTGCGGGGAATGTAAACGACG
TCGAACGAAGTGTAGTGCAGATACAACAGGGACGCCGTGCGCTGAATGTG
CTCTCCACGACCGGGAGTGCGTGATCGATGAATTCGCCGACAAACGACGC
AAGGTAGCGGCCAAGCGTGCCCAGGAGGATCTAAAATATTACCGTGGCTT
TGTGGAACAACTTCTTGAGGCGCTGCGATCTAGTGATTGTGCCACCATCG
ATGGTATTCTCGACGTCATCCGGTCGGGCGCAACTCATGATGAAATCCGG
GCGGTTCTTGCTCGCTCCGCGCCGAAGGCTGAGATTAATATCCCCGACGG
AGTAGATTCCGTGGTGACAGACGGCAACAACAGCCCGCCGGCGAGCTCCA
AGCCGGATGGCCTACCCGAATGAATGGCCCAACAAGGGTCTGGGAAACCT
TTTCGTCCCATTGCCCCTAGGAGGATACCAGAGCCTCCAACCCCGGCCGC
TGCGCCCGAGGAGGGGAAAATAAAGCGAGCTTCCACGGCTTGCGGGGAAT
GTAAACGACGTCGAACGAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_88150-T1 | ATCC64974_88150-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000016.1 | supercontig | OGUI01000016.1:405177..405881 - |
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