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ATCC64974_88250-T1, ATCC64974_88250-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_88250-T1
Unique NameATCC64974_88250-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:443516..444575+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_88250-T1 ID=ATCC64974_88250-T1|Name=ATCC64974_88250-T1|organism=Aspergillus niger N402|type=mRNA|length=1060bp|location=Sequence derived from alignment at OGUI01000016.1:443516..444575+ (Aspergillus niger N402)
ATGTCTCCTCCCGCTGCTATCTTCGAGCCCACCGTGGTCCCCACTGGCAT
CAAGTCCAACGTGGTGGTCCCGGAGGCCGCTCCCGTCACTGGCTCGTCCC
AGACCCAGCTGCTTGACCACTTCGCTGGCAAGTGGGACAACTTCAAGTTC
GCTCCCATCCGTGAGAGTCAGGTTTCGCGTGCTATGACCAGACGCTACTT
CCAGGATCTGGACAAGTACGCTGAGAGTGACATTGTCATTGTGGGTGCTG
GTTCCTGCGGTTTGAGCACCGCGTATGTTCTGGCCAAGGCTCGCCCGGAC
CTGAAGATTGCCATTATCGAGGCCAATGTTTCCCCTGGTTCGTCCTCCAT
ATAATTCTCCACATAGTTCGCCAGATGGGTCAACATACTAACTCTCCATA
GGTGGTGGTGCCTGGCTTGGTGGCCAGCTCTTCTCCGCCATGGTCATGCG
TCGTCCCGCCGAGGTCTTCCTGAACGAGCTGGGCGTTCCCTACGAGGAAG
ACCTAGCGAACCCCAACTACGTTGTGGTCAAGCACGCCTCGCTGTTCACC
TCGACCCTGTTGTCCAAGGTTCTCTCCTTCCCCAACGTCAAGCTCTTCAA
CGCCACCAGCGTGGAGGACCTGATCACTCGCCCTGCTGCCAGCGGCGACC
CCAAGGAAGTCCGCATTGCCGGTGTGGTCACGAACTGGACCCTGGTCACA
CTCCACCACGACGACCACTCCTGCATGGACCCTAACACCATCAACGCTCC
CGTGATCATCAGTACCACCGGCCACGACGGTCCTTTCGGTGCCTTCTCGG
CCAAGAGACTCGTCTCCATGAACAGCGTCGACAAGCTGGGCGGTATGCGC
GGCTTGGACATGAACTCGGCCGAGGACGCCATCGTCAAGAACACCCGTGA
GGTCACCAAGGGTTTGATCATCGGTGGTATGGAGCTGTCGGAGATCGATG
GCTTCAACCGCATGGGTCCTACTTTCGGTGCTATGGTCCTGAGCGGTGTC
AAGGCTGCCGAGGAGGCGCTGCAGATCTTTGACGAGCGTAAGCGCGAGTG
CGCTGAGTAA
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Coding sequence (CDS) from alignment at OGUI01000016.1:443516..444575+

>ATCC64974_88250-T1 ID=ATCC64974_88250-T1|Name=ATCC64974_88250-T1|organism=Aspergillus niger N402|type=CDS|length=1992bp|location=Sequence derived from alignment at OGUI01000016.1:443516..444575+ (Aspergillus niger N402)
ATGTCTCCTCCCGCTGCTATCTTCGAGCCCACCGTGGTCCCCACTGGCAT
CAAGTCCAACGTGGTGGTCCCGGAGGCCGCTCCCGTCACTGGCTCGTCCC
AGACCCAGCTGCTTGACCACTTCGCTGGCAAGTGGGACAACTTCAAGTTC
GCTCCCATCCGTGAGAGTCAGGTTTCGCGTGCTATGACCAGACGCTACTT
CCAGGATCTGGACAAGTACGCTGAGAGTGACATTGTCATTGTGGGTGCTG
GTTCCTGCGGTTTGAGCACCGCGTATGTTCTGGCCAAGGCTCGCCCGGAC
CTGAAGATTGCCATTATCGAGGCCAATGTTTCCCCTGGTGGTGGTGCCTG
GCTTGGTGGCCAGCTCTTCTCCGCCATGGTCATGCGTCGTCCCGCCGAGG
TCTTCCTGAACGAGCTGGGCGTTCCCTACGAGGAAGACCTAGCGAACCCC
AACTACGTTGTGGTCAAGCACGCCTCGCTGTTCACCTCGACCCTGTTGTC
CAAGGTTCTCTCCTTCCCCAACGTCAAGCTCTTCAACGCCACCAGCGTGG
AGGACCTGATCACTCGCCCTGCTGCCAGCGGCGACCCCAAGGAAGTCCGC
ATTGCCGGTGTGGTCACGAACTGGACCCTGGTCACACTCCACCACGACGA
CCACTCCTGCATGGACCCTAACACCATCAACGCTCCCGTGATCATCAGTA
CCACCGGCCACGACGGTCCTTTCGGTGCCTTCTCGGCCAAGAGACTCGTC
TCCATGAACAGCGTCGACAAGCTGGGCGGTATGCGCGGCTTGGACATGAA
CTCGGCCGAGGACGCCATCGTCAAGAACACCCGTGAGGTCACCAAGGGTT
TGATCATCGGTGGTATGGAGCTGTCGGAGATCGATGGCTTCAACCGCATG
GGTCCTACTTTCGGTGCTATGGTCCTGAGCGGTGTCAAGGCTGCCGAGGA
GGCGCTGCAGATCTTTGACGAGCGTAAGCGCGAGTGCGCTGAGTAAATGT
CTCCTCCCGCTGCTATCTTCGAGCCCACCGTGGTCCCCACTGGCATCAAG
TCCAACGTGGTGGTCCCGGAGGCCGCTCCCGTCACTGGCTCGTCCCAGAC
CCAGCTGCTTGACCACTTCGCTGGCAAGTGGGACAACTTCAAGTTCGCTC
CCATCCGTGAGAGTCAGGTTTCGCGTGCTATGACCAGACGCTACTTCCAG
GATCTGGACAAGTACGCTGAGAGTGACATTGTCATTGTGGGTGCTGGTTC
CTGCGGTTTGAGCACCGCGTATGTTCTGGCCAAGGCTCGCCCGGACCTGA
AGATTGCCATTATCGAGGCCAATGTTTCCCCTGGTGGTGGTGCCTGGCTT
GGTGGCCAGCTCTTCTCCGCCATGGTCATGCGTCGTCCCGCCGAGGTCTT
CCTGAACGAGCTGGGCGTTCCCTACGAGGAAGACCTAGCGAACCCCAACT
ACGTTGTGGTCAAGCACGCCTCGCTGTTCACCTCGACCCTGTTGTCCAAG
GTTCTCTCCTTCCCCAACGTCAAGCTCTTCAACGCCACCAGCGTGGAGGA
CCTGATCACTCGCCCTGCTGCCAGCGGCGACCCCAAGGAAGTCCGCATTG
CCGGTGTGGTCACGAACTGGACCCTGGTCACACTCCACCACGACGACCAC
TCCTGCATGGACCCTAACACCATCAACGCTCCCGTGATCATCAGTACCAC
CGGCCACGACGGTCCTTTCGGTGCCTTCTCGGCCAAGAGACTCGTCTCCA
TGAACAGCGTCGACAAGCTGGGCGGTATGCGCGGCTTGGACATGAACTCG
GCCGAGGACGCCATCGTCAAGAACACCCGTGAGGTCACCAAGGGTTTGAT
CATCGGTGGTATGGAGCTGTCGGAGATCGATGGCTTCAACCGCATGGGTC
CTACTTTCGGTGCTATGGTCCTGAGCGGTGTCAAGGCTGCCGAGGAGGCG
CTGCAGATCTTTGACGAGCGTAAGCGCGAGTGCGCTGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009228thiamine biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_88250ATCC64974_88250Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_88250-T1.exon1ATCC64974_88250-T1.exon1Aspergillus niger N402exon
ATCC64974_88250-T1.exon2ATCC64974_88250-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_88250-T1.cdsATCC64974_88250-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_88250-T1ATCC64974_88250-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027495
DBxrefInterPro:IPR002922
DBxrefInterPro:IPR036188
DBxrefPFAM:PF01946
DBxrefPFAM:PF13450
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:443516..444575 +
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