|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000016.1:498213..500764+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_88410-T1 ID=ATCC64974_88410-T1|Name=ATCC64974_88410-T1|organism=Aspergillus niger N402|type=mRNA|length=2552bp|location=Sequence derived from alignment at OGUI01000016.1:498213..500764+ (Aspergillus niger N402)
ATGGCAGGGAGCAAGGGTCACGACTTCGAGACAAGTTGGAATGAACTGTC
CACCTCGCTGAAGAAAATTCACACCAAAGATGCCTCAGCTTTGTCCTTCG
AAGAGATATACCGCAAGTCATACAACATCGTTCTGGGAATGCGTGGAGTG
GAACTGTACGAACGGATTCAACAACTGGAACGTGACTGGTTAGATACAGA
AGTCCACAGGTTGGTGACCGGAGCCATCTCGCCCAGTCTGCTGCTGGCGA
GGCAGCTGGTAGATGCGCAAGACCAAGCCAATGAGAGGCGAGATGCAGGA
GAGAGATTTCTGGCAGTGCTCAAGGAAGCTTGGGAGGATCATCAGCTGTG
TATGAAAATGATTACGGATGTTCTTATGTATATGGTAAGTCTATCATCCT
TTATCTGCACTGAAAATCCGCGTTAACTGAAGGATAATCTCATCCATCAG
GACCGTGTTATGTCGACGGACCACCGAAAGCCATCCATTTATGTGGCATC
AATGGCGTTGTTTCGAGACCATGTGCTTCGTGCTCCTATTCGACCGGACA
CCAGAACGAGCGTATACGATGTTTTGGAGTCGACTGTGCTGTTCATGCTA
CAATTGGAACGGTCAGGGCACATAATCGACAGGCCTTTGATCAGACACTG
CGTGTATATGCTGGAAGGGCTCTATGAGACTATTACAGAGGAGGAATCAT
CCAAGTTGTACCTTACTGTCTTTGAGCCGGCATTCTTGGAAGCTAGTAAG
AAATTCTACCAGGCTGAAGGGCGGCGATTACTGGAGACCGGCGATGCTGC
AACCTTTTGCAAGGTCGCCACAGAGCGTCTCTCGGAGGAGACCGAACGGT
GTATTGACACGCTGTCATCCCTCACCAAGACGAAGATTAAGGATGTCCTC
GATAATGAGCTGATAAGAAACAACATCGCCGAGGTGGTGAAACTCGAGGG
CACCGGTGTCAGGACCATGCTGGACAATGATCGCATCGACAATCTACGAA
GCGTTTACGTGCTCAGCGCACGGGTCGACAACAAAAAGAGCCCCTTGACC
GCTGCCGTGCAGAGGCGGATTGTCGAGATGGGCAAAGAAATTAATTCCTC
TGCAATTGCATCACAAGCCTCGGCTCCCAGTGCAGGCAAGAAGACTGAAG
CTGGTGAAAAGAAGCCAGCTGAGAAACCAGTCAACCTGCAGACGATGGCT
GCCATTAAATGGGTGGACGATATTCTGCGTCTGAAGCAGAAGTTTGACAA
CATCTGGGAGAATGCGTTTGAGTCTGACCAAGTTCTACAAAGCGCGATAA
CCAGCAGCTTCTCCGAGTTCATCAACCTGTCTCAAGGTGGAGACTCGCGC
AGTTCTGAATACCTATCCCTCTTCTTCGACGAGAACCTAAAGAAGGGCAT
TAAAGGCAAGACAGATAGCGAGATTGATACTTTGCTGGACAATGGAATCA
CGCTTCTGCGTTACATCAAAGACAAGGACATGTTCGAGGCATACTACAAG
AAGCATCTCTCCCGTCGTCTGCTGATGAAGCGCTCCGTGAGCATGGATGC
CGAGCGACAGATGATCTCTAAAATGAAGATGGAAGTCGGCAACCAGTTCA
CACAGCGCCTGGAGTCCATGTTCAAGGACATGACCATATCTGAGGATCTG
ACATCTAGCTACAAGGAACACATGCGACAGTCCAGCGACCCCGACCAGAG
GCGGATCGAGCTGGATATTAACGTGCTCACCAGTACGATGTGGCCCATGG
AGATCATGTCTAACGCGAGAAATGACGAGGTCCAACTTCCCCCCATCCTT
CCCAAGGAGGTTGACAGCGTCAAGCAAAGCTTCGAACAATTCTACCTTGG
CAAGCACAATGGCCGCAAGCTGTCGTGGCAAGCCAGCATGGGTACGGCCG
ACATCCGCGCAACTTTCCAACGAGCCAATGGCAAGGTCCAGCGACACGAA
CTCAACGTCTCCACCTACGCCATGATCATTCTGCTACTTTTCAACGATGT
GCCTGCGGGCGAGTCTCTCACCTATACGGACATTCAAGCACGCACTCGTA
TTCCCGATCACGATCTGATTCGAAACTTGCAATCCCTGGCCGTTGCACCC
AAGACTCGTGTCCTGAAGAAAGACCCCATGAGCAAGGACGTCAAGCCCAC
AGACAAATTTGTCTTCAACAACGAGTTCCAGAGTCCGTTCATGAAGGTCC
GAATCGGCGTTGTCAGCGGCAGTGCCAACAAGGTCGAGAACCAGGACCAG
CGCAAGGAGACGGAGAAGAAGATGAGTGAGGAGCGCGGAGCCAGCATCGA
GGCTGCCATTGTCAGAATCATGAAGTGGGTCCCCAGCTCCATGTCCTACC
ATATTGACTTTTCGCTAACCAATACTTCAGACAACGTAAAACACTAATCC
ACTCGCAACTCATGACCGAGGTGCTCTCTCAGCTGTCGGCGCGATTCGTG
CCAGACGTCAACATGATCAAAAAGCGCATTGAGAGCTTGATTGATCGGGA
GTATCTCGAGCGAGTTGAAGAGGACCCACCTACTTACGGATATGTGGCGT
AG back to topCoding sequence (CDS) from alignment at OGUI01000016.1:498213..500764+ >ATCC64974_88410-T1 ID=ATCC64974_88410-T1|Name=ATCC64974_88410-T1|organism=Aspergillus niger N402|type=CDS|length=7290bp|location=Sequence derived from alignment at OGUI01000016.1:498213..500764+ (Aspergillus niger N402)
ATGGCAGGGAGCAAGGGTCACGACTTCGAGACAAGTTGGAATGAACTGTC
CACCTCGCTGAAGAAAATTCACACCAAAGATGCCTCAGCTTTGTCCTTCG
AAGAGATATACCGCAAGTCATACAACATCGTTCTGGGAATGCGTGGAGTG
GAACTGTACGAACGGATTCAACAACTGGAACGTGACTGGTTAGATACAGA
AGTCCACAGGTTGGTGACCGGAGCCATCTCGCCCAGTCTGCTGCTGGCGA
GGCAGCTGGTAGATGCGCAAGACCAAGCCAATGAGAGGCGAGATGCAGGA
GAGAGATTTCTGGCAGTGCTCAAGGAAGCTTGGGAGGATCATCAGCTGTG
TATGAAAATGATTACGGATGTTCTTATGTATATGGACCGTGTTATGTCGA
CGGACCACCGAAAGCCATCCATTTATGTGGCATCAATGGCGTTGTTTCGA
GACCATGTGCTTCGTGCTCCTATTCGACCGGACACCAGAACGAGCGTATA
CGATGTTTTGGAGTCGACTGTGCTGTTCATGCTACAATTGGAACGGTCAG
GGCACATAATCGACAGGCCTTTGATCAGACACTGCGTGTATATGCTGGAA
GGGCTCTATGAGACTATTACAGAGGAGGAATCATCCAAGTTGTACCTTAC
TGTCTTTGAGCCGGCATTCTTGGAAGCTAGTAAGAAATTCTACCAGGCTG
AAGGGCGGCGATTACTGGAGACCGGCGATGCTGCAACCTTTTGCAAGGTC
GCCACAGAGCGTCTCTCGGAGGAGACCGAACGGTGTATTGACACGCTGTC
ATCCCTCACCAAGACGAAGATTAAGGATGTCCTCGATAATGAGCTGATAA
GAAACAACATCGCCGAGGTGGTGAAACTCGAGGGCACCGGTGTCAGGACC
ATGCTGGACAATGATCGCATCGACAATCTACGAAGCGTTTACGTGCTCAG
CGCACGGGTCGACAACAAAAAGAGCCCCTTGACCGCTGCCGTGCAGAGGC
GGATTGTCGAGATGGGCAAAGAAATTAATTCCTCTGCAATTGCATCACAA
GCCTCGGCTCCCAGTGCAGGCAAGAAGACTGAAGCTGGTGAAAAGAAGCC
AGCTGAGAAACCAGTCAACCTGCAGACGATGGCTGCCATTAAATGGGTGG
ACGATATTCTGCGTCTGAAGCAGAAGTTTGACAACATCTGGGAGAATGCG
TTTGAGTCTGACCAAGTTCTACAAAGCGCGATAACCAGCAGCTTCTCCGA
GTTCATCAACCTGTCTCAAGGTGGAGACTCGCGCAGTTCTGAATACCTAT
CCCTCTTCTTCGACGAGAACCTAAAGAAGGGCATTAAAGGCAAGACAGAT
AGCGAGATTGATACTTTGCTGGACAATGGAATCACGCTTCTGCGTTACAT
CAAAGACAAGGACATGTTCGAGGCATACTACAAGAAGCATCTCTCCCGTC
GTCTGCTGATGAAGCGCTCCGTGAGCATGGATGCCGAGCGACAGATGATC
TCTAAAATGAAGATGGAAGTCGGCAACCAGTTCACACAGCGCCTGGAGTC
CATGTTCAAGGACATGACCATATCTGAGGATCTGACATCTAGCTACAAGG
AACACATGCGACAGTCCAGCGACCCCGACCAGAGGCGGATCGAGCTGGAT
ATTAACGTGCTCACCAGTACGATGTGGCCCATGGAGATCATGTCTAACGC
GAGAAATGACGAGGTCCAACTTCCCCCCATCCTTCCCAAGGAGGTTGACA
GCGTCAAGCAAAGCTTCGAACAATTCTACCTTGGCAAGCACAATGGCCGC
AAGCTGTCGTGGCAAGCCAGCATGGGTACGGCCGACATCCGCGCAACTTT
CCAACGAGCCAATGGCAAGGTCCAGCGACACGAACTCAACGTCTCCACCT
ACGCCATGATCATTCTGCTACTTTTCAACGATGTGCCTGCGGGCGAGTCT
CTCACCTATACGGACATTCAAGCACGCACTCGTATTCCCGATCACGATCT
GATTCGAAACTTGCAATCCCTGGCCGTTGCACCCAAGACTCGTGTCCTGA
AGAAAGACCCCATGAGCAAGGACGTCAAGCCCACAGACAAATTTGTCTTC
AACAACGAGTTCCAGAGTCCGTTCATGAAGGTCCGAATCGGCGTTGTCAG
CGGCAGTGCCAACAAGGTCGAGAACCAGGACCAGCGCAAGGAGACGGAGA
AGAAGATGAGTGAGGAGCGCGGAGCCAGCATCGAGGCTGCCATTGTCAGA
ATCATGAAACAACGTAAAACACTAATCCACTCGCAACTCATGACCGAGGT
GCTCTCTCAGCTGTCGGCGCGATTCGTGCCAGACGTCAACATGATCAAAA
AGCGCATTGAGAGCTTGATTGATCGGGAGTATCTCGAGCGAGTTGAAGAG
GACCCACCTACTTACGGATATGTGGCGTAGATGGCAGGGAGCAAGGGTCA
CGACTTCGAGACAAGTTGGAATGAACTGTCCACCTCGCTGAAGAAAATTC
ACACCAAAGATGCCTCAGCTTTGTCCTTCGAAGAGATATACCGCAAGTCA
TACAACATCGTTCTGGGAATGCGTGGAGTGGAACTGTACGAACGGATTCA
ACAACTGGAACGTGACTGGTTAGATACAGAAGTCCACAGGTTGGTGACCG
GAGCCATCTCGCCCAGTCTGCTGCTGGCGAGGCAGCTGGTAGATGCGCAA
GACCAAGCCAATGAGAGGCGAGATGCAGGAGAGAGATTTCTGGCAGTGCT
CAAGGAAGCTTGGGAGGATCATCAGCTGTGTATGAAAATGATTACGGATG
TTCTTATGTATATGGACCGTGTTATGTCGACGGACCACCGAAAGCCATCC
ATTTATGTGGCATCAATGGCGTTGTTTCGAGACCATGTGCTTCGTGCTCC
TATTCGACCGGACACCAGAACGAGCGTATACGATGTTTTGGAGTCGACTG
TGCTGTTCATGCTACAATTGGAACGGTCAGGGCACATAATCGACAGGCCT
TTGATCAGACACTGCGTGTATATGCTGGAAGGGCTCTATGAGACTATTAC
AGAGGAGGAATCATCCAAGTTGTACCTTACTGTCTTTGAGCCGGCATTCT
TGGAAGCTAGTAAGAAATTCTACCAGGCTGAAGGGCGGCGATTACTGGAG
ACCGGCGATGCTGCAACCTTTTGCAAGGTCGCCACAGAGCGTCTCTCGGA
GGAGACCGAACGGTGTATTGACACGCTGTCATCCCTCACCAAGACGAAGA
TTAAGGATGTCCTCGATAATGAGCTGATAAGAAACAACATCGCCGAGGTG
GTGAAACTCGAGGGCACCGGTGTCAGGACCATGCTGGACAATGATCGCAT
CGACAATCTACGAAGCGTTTACGTGCTCAGCGCACGGGTCGACAACAAAA
AGAGCCCCTTGACCGCTGCCGTGCAGAGGCGGATTGTCGAGATGGGCAAA
GAAATTAATTCCTCTGCAATTGCATCACAAGCCTCGGCTCCCAGTGCAGG
CAAGAAGACTGAAGCTGGTGAAAAGAAGCCAGCTGAGAAACCAGTCAACC
TGCAGACGATGGCTGCCATTAAATGGGTGGACGATATTCTGCGTCTGAAG
CAGAAGTTTGACAACATCTGGGAGAATGCGTTTGAGTCTGACCAAGTTCT
ACAAAGCGCGATAACCAGCAGCTTCTCCGAGTTCATCAACCTGTCTCAAG
GTGGAGACTCGCGCAGTTCTGAATACCTATCCCTCTTCTTCGACGAGAAC
CTAAAGAAGGGCATTAAAGGCAAGACAGATAGCGAGATTGATACTTTGCT
GGACAATGGAATCACGCTTCTGCGTTACATCAAAGACAAGGACATGTTCG
AGGCATACTACAAGAAGCATCTCTCCCGTCGTCTGCTGATGAAGCGCTCC
GTGAGCATGGATGCCGAGCGACAGATGATCTCTAAAATGAAGATGGAAGT
CGGCAACCAGTTCACACAGCGCCTGGAGTCCATGTTCAAGGACATGACCA
TATCTGAGGATCTGACATCTAGCTACAAGGAACACATGCGACAGTCCAGC
GACCCCGACCAGAGGCGGATCGAGCTGGATATTAACGTGCTCACCAGTAC
GATGTGGCCCATGGAGATCATGTCTAACGCGAGAAATGACGAGGTCCAAC
TTCCCCCCATCCTTCCCAAGGAGGTTGACAGCGTCAAGCAAAGCTTCGAA
CAATTCTACCTTGGCAAGCACAATGGCCGCAAGCTGTCGTGGCAAGCCAG
CATGGGTACGGCCGACATCCGCGCAACTTTCCAACGAGCCAATGGCAAGG
TCCAGCGACACGAACTCAACGTCTCCACCTACGCCATGATCATTCTGCTA
CTTTTCAACGATGTGCCTGCGGGCGAGTCTCTCACCTATACGGACATTCA
AGCACGCACTCGTATTCCCGATCACGATCTGATTCGAAACTTGCAATCCC
TGGCCGTTGCACCCAAGACTCGTGTCCTGAAGAAAGACCCCATGAGCAAG
GACGTCAAGCCCACAGACAAATTTGTCTTCAACAACGAGTTCCAGAGTCC
GTTCATGAAGGTCCGAATCGGCGTTGTCAGCGGCAGTGCCAACAAGGTCG
AGAACCAGGACCAGCGCAAGGAGACGGAGAAGAAGATGAGTGAGGAGCGC
GGAGCCAGCATCGAGGCTGCCATTGTCAGAATCATGAAACAACGTAAAAC
ACTAATCCACTCGCAACTCATGACCGAGGTGCTCTCTCAGCTGTCGGCGC
GATTCGTGCCAGACGTCAACATGATCAAAAAGCGCATTGAGAGCTTGATT
GATCGGGAGTATCTCGAGCGAGTTGAAGAGGACCCACCTACTTACGGATA
TGTGGCGTAGATGGCAGGGAGCAAGGGTCACGACTTCGAGACAAGTTGGA
ATGAACTGTCCACCTCGCTGAAGAAAATTCACACCAAAGATGCCTCAGCT
TTGTCCTTCGAAGAGATATACCGCAAGTCATACAACATCGTTCTGGGAAT
GCGTGGAGTGGAACTGTACGAACGGATTCAACAACTGGAACGTGACTGGT
TAGATACAGAAGTCCACAGGTTGGTGACCGGAGCCATCTCGCCCAGTCTG
CTGCTGGCGAGGCAGCTGGTAGATGCGCAAGACCAAGCCAATGAGAGGCG
AGATGCAGGAGAGAGATTTCTGGCAGTGCTCAAGGAAGCTTGGGAGGATC
ATCAGCTGTGTATGAAAATGATTACGGATGTTCTTATGTATATGGACCGT
GTTATGTCGACGGACCACCGAAAGCCATCCATTTATGTGGCATCAATGGC
GTTGTTTCGAGACCATGTGCTTCGTGCTCCTATTCGACCGGACACCAGAA
CGAGCGTATACGATGTTTTGGAGTCGACTGTGCTGTTCATGCTACAATTG
GAACGGTCAGGGCACATAATCGACAGGCCTTTGATCAGACACTGCGTGTA
TATGCTGGAAGGGCTCTATGAGACTATTACAGAGGAGGAATCATCCAAGT
TGTACCTTACTGTCTTTGAGCCGGCATTCTTGGAAGCTAGTAAGAAATTC
TACCAGGCTGAAGGGCGGCGATTACTGGAGACCGGCGATGCTGCAACCTT
TTGCAAGGTCGCCACAGAGCGTCTCTCGGAGGAGACCGAACGGTGTATTG
ACACGCTGTCATCCCTCACCAAGACGAAGATTAAGGATGTCCTCGATAAT
GAGCTGATAAGAAACAACATCGCCGAGGTGGTGAAACTCGAGGGCACCGG
TGTCAGGACCATGCTGGACAATGATCGCATCGACAATCTACGAAGCGTTT
ACGTGCTCAGCGCACGGGTCGACAACAAAAAGAGCCCCTTGACCGCTGCC
GTGCAGAGGCGGATTGTCGAGATGGGCAAAGAAATTAATTCCTCTGCAAT
TGCATCACAAGCCTCGGCTCCCAGTGCAGGCAAGAAGACTGAAGCTGGTG
AAAAGAAGCCAGCTGAGAAACCAGTCAACCTGCAGACGATGGCTGCCATT
AAATGGGTGGACGATATTCTGCGTCTGAAGCAGAAGTTTGACAACATCTG
GGAGAATGCGTTTGAGTCTGACCAAGTTCTACAAAGCGCGATAACCAGCA
GCTTCTCCGAGTTCATCAACCTGTCTCAAGGTGGAGACTCGCGCAGTTCT
GAATACCTATCCCTCTTCTTCGACGAGAACCTAAAGAAGGGCATTAAAGG
CAAGACAGATAGCGAGATTGATACTTTGCTGGACAATGGAATCACGCTTC
TGCGTTACATCAAAGACAAGGACATGTTCGAGGCATACTACAAGAAGCAT
CTCTCCCGTCGTCTGCTGATGAAGCGCTCCGTGAGCATGGATGCCGAGCG
ACAGATGATCTCTAAAATGAAGATGGAAGTCGGCAACCAGTTCACACAGC
GCCTGGAGTCCATGTTCAAGGACATGACCATATCTGAGGATCTGACATCT
AGCTACAAGGAACACATGCGACAGTCCAGCGACCCCGACCAGAGGCGGAT
CGAGCTGGATATTAACGTGCTCACCAGTACGATGTGGCCCATGGAGATCA
TGTCTAACGCGAGAAATGACGAGGTCCAACTTCCCCCCATCCTTCCCAAG
GAGGTTGACAGCGTCAAGCAAAGCTTCGAACAATTCTACCTTGGCAAGCA
CAATGGCCGCAAGCTGTCGTGGCAAGCCAGCATGGGTACGGCCGACATCC
GCGCAACTTTCCAACGAGCCAATGGCAAGGTCCAGCGACACGAACTCAAC
GTCTCCACCTACGCCATGATCATTCTGCTACTTTTCAACGATGTGCCTGC
GGGCGAGTCTCTCACCTATACGGACATTCAAGCACGCACTCGTATTCCCG
ATCACGATCTGATTCGAAACTTGCAATCCCTGGCCGTTGCACCCAAGACT
CGTGTCCTGAAGAAAGACCCCATGAGCAAGGACGTCAAGCCCACAGACAA
ATTTGTCTTCAACAACGAGTTCCAGAGTCCGTTCATGAAGGTCCGAATCG
GCGTTGTCAGCGGCAGTGCCAACAAGGTCGAGAACCAGGACCAGCGCAAG
GAGACGGAGAAGAAGATGAGTGAGGAGCGCGGAGCCAGCATCGAGGCTGC
CATTGTCAGAATCATGAAACAACGTAAAACACTAATCCACTCGCAACTCA
TGACCGAGGTGCTCTCTCAGCTGTCGGCGCGATTCGTGCCAGACGTCAAC
ATGATCAAAAAGCGCATTGAGAGCTTGATTGATCGGGAGTATCTCGAGCG
AGTTGAAGAGGACCCACCTACTTACGGATATGTGGCGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0031461 | cullin-RING ubiquitin ligase complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006511 | ubiquitin-dependent protein catabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0031625 | ubiquitin protein ligase binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_88410-T1 | ATCC64974_88410-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036317 |
| DBxref | InterPro:IPR036390 |
| DBxref | InterPro:IPR016159 |
| DBxref | InterPro:IPR016157 |
| DBxref | InterPro:IPR001373 |
| DBxref | InterPro:IPR036388 |
| DBxref | InterPro:IPR019559 |
| DBxref | InterPro:IPR016158 |
| DBxref | PFAM:PF10557 |
| DBxref | PFAM:PF00888 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000016.1 | supercontig | OGUI01000016.1:498213..500764 + |
|
