You are here

Home

ATCC64974_88560-T1, ATCC64974_88560-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_88560-T1
Unique NameATCC64974_88560-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:557204..558349+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_88560-T1 ID=ATCC64974_88560-T1|Name=ATCC64974_88560-T1|organism=Aspergillus niger N402|type=mRNA|length=1146bp|location=Sequence derived from alignment at OGUI01000016.1:557204..558349+ (Aspergillus niger N402)
ATGTCCTTTCCGCCACCTCCAGGTCTCAGACAAGCCCCGTCGTCTCTTCC
TCCCCGGCCACCGGCAACAGCAAGCGGTGCCTCACCATCTACCTTTCAAC
CTGCATATTCGGCGGCACCGTCTGGTGCAAGCAGCAGCTATGGCGGAAAC
GGGTCTCGGCCGGGCTACAGCGCCATCACAGCATTCCAGCCTCGCTCGGT
AGCTTCTAGCCAACCTTACCGTACCAGCAGCCCCGTCGTGTCCGCTCCGC
CAACTACATCTAGTGGATATTCGACACCGACCACGGGCAGTTACGGTGGC
TACTACCCTCAGGCGCAAGCGTCATACCAAAGCGGTCCTTCTTACTACGG
AGCCGCCCAATACAATGAAAACACATACGGTCCGTCTGTACCGCGGATTC
AAAACCCCTTCACGCCCGCAGGGGGGGATCAGTCAGGCGCCTATGGCATG
CGGGGGAGGAACTTTGGCCGGAATGAATCGGGGCTGGACCCTGAAACGGA
AGCCCAGATTGCACAGTGGCAGAGTGCCTACGTAAACAAGGAGGAGATGC
CCGTAGCCGGCAAGGTTCCTGGTCGCCCGGGTGTTAACCCGGGTGTTTCT
GGTCCCACTTCTGGTGCAAATACCCCATCCGGATCCAATACAGCGGCTAA
CACGCCAGCACCCACCGTGGGTAACCCGGAGCCTGCACCGAAGACTGTGG
TTCGTGCCGGAGGTGGTCAGACCTGGTCCGATTCGACCCTACTCGAGTGG
GATCCCGCACATTTTCGCTTGTTTGTAGGCAATCTGGCTGGTGAGGTCAC
GGACGATTCGCTACTCAAGGCATTCTCCAAGTACACCTCTGTTCAAAAGG
CTCGAGTAATCCGTGACAAACGTACCCAGAAGAGTAAAGGCTACGGATTC
GTCAGTTTCAGCGACGGCGACGATTATTTCAAGGCTGCGAGAGAGATGCA
GGGCAAGTACATTGGCTCGCATCCGGTTCTGCTCCGACGAGCCACCACAG
AGGTCCGTCCCGTGTCCAACACGAAAAATGGGAAGAAGCATGGTGGTGGA
GGCGGTTCGGGTGGTGGCTCCGGCAGTGGTAAGGTCAAGCACGATGGAGT
CAAAAAGCACGGAAAGACCAAGGGAGGACTCAAGATTATTGGATGA
back to top

Coding sequence (CDS) from alignment at OGUI01000016.1:557204..558349+

>ATCC64974_88560-T1 ID=ATCC64974_88560-T1|Name=ATCC64974_88560-T1|organism=Aspergillus niger N402|type=CDS|length=1146bp|location=Sequence derived from alignment at OGUI01000016.1:557204..558349+ (Aspergillus niger N402)
ATGTCCTTTCCGCCACCTCCAGGTCTCAGACAAGCCCCGTCGTCTCTTCC
TCCCCGGCCACCGGCAACAGCAAGCGGTGCCTCACCATCTACCTTTCAAC
CTGCATATTCGGCGGCACCGTCTGGTGCAAGCAGCAGCTATGGCGGAAAC
GGGTCTCGGCCGGGCTACAGCGCCATCACAGCATTCCAGCCTCGCTCGGT
AGCTTCTAGCCAACCTTACCGTACCAGCAGCCCCGTCGTGTCCGCTCCGC
CAACTACATCTAGTGGATATTCGACACCGACCACGGGCAGTTACGGTGGC
TACTACCCTCAGGCGCAAGCGTCATACCAAAGCGGTCCTTCTTACTACGG
AGCCGCCCAATACAATGAAAACACATACGGTCCGTCTGTACCGCGGATTC
AAAACCCCTTCACGCCCGCAGGGGGGGATCAGTCAGGCGCCTATGGCATG
CGGGGGAGGAACTTTGGCCGGAATGAATCGGGGCTGGACCCTGAAACGGA
AGCCCAGATTGCACAGTGGCAGAGTGCCTACGTAAACAAGGAGGAGATGC
CCGTAGCCGGCAAGGTTCCTGGTCGCCCGGGTGTTAACCCGGGTGTTTCT
GGTCCCACTTCTGGTGCAAATACCCCATCCGGATCCAATACAGCGGCTAA
CACGCCAGCACCCACCGTGGGTAACCCGGAGCCTGCACCGAAGACTGTGG
TTCGTGCCGGAGGTGGTCAGACCTGGTCCGATTCGACCCTACTCGAGTGG
GATCCCGCACATTTTCGCTTGTTTGTAGGCAATCTGGCTGGTGAGGTCAC
GGACGATTCGCTACTCAAGGCATTCTCCAAGTACACCTCTGTTCAAAAGG
CTCGAGTAATCCGTGACAAACGTACCCAGAAGAGTAAAGGCTACGGATTC
GTCAGTTTCAGCGACGGCGACGATTATTTCAAGGCTGCGAGAGAGATGCA
GGGCAAGTACATTGGCTCGCATCCGGTTCTGCTCCGACGAGCCACCACAG
AGGTCCGTCCCGTGTCCAACACGAAAAATGGGAAGAAGCATGGTGGTGGA
GGCGGTTCGGGTGGTGGCTCCGGCAGTGGTAAGGTCAAGCACGATGGAGT
CAAAAAGCACGGAAAGACCAAGGGAGGACTCAAGATTATTGGATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_88560ATCC64974_88560Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_88560-T1.exon1ATCC64974_88560-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_88560-T1.cdsATCC64974_88560-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_88560-T1ATCC64974_88560-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034215
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:557204..558349 +
Powered by Drupal