You are here

Home

ATCC64974_88600-T1, ATCC64974_88600-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_88600-T1
Unique NameATCC64974_88600-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:566740..568623-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_88600-T1 ID=ATCC64974_88600-T1|Name=ATCC64974_88600-T1|organism=Aspergillus niger N402|type=mRNA|length=1884bp|location=Sequence derived from alignment at OGUI01000016.1:566740..568623- (Aspergillus niger N402)
ATGCATCCTCACGTCCTCTGCCTAGGGCTGCTGCTTGCTAGTAGTAATGC
AGCTGCAGTTTCCAGCACTGCCAGTTCTACAGCTGCATCCCCTCTGGTGA
CCACTCTGAACATCACTGTAGAAGGTGGAAACTATCCACTGCACATCTTC
CTATTGAATACAAGTACACCTAACAAATACTCCAGATTTATGGAACCTAT
ATATTGGCCCCGTTGAGACTGCCTCGATCAACACCACCGTTGAACCTACT
CCAATTCCATCTGCCGAACTGATCCCCCCTCCCCCACTCTACTACCCCTC
CTACTTACCAGGAGCCCAGATCCCAGGACTACGAAGAAACGAAAGCTGGT
CATTCCCCAAAGGGTTCTGGTGGGGCGTATCAAGCGCCTCATATCAAGTC
GAAGGGGCCGTCAAAGCAGATGGCCGGGGCCCTAGCTTATGGGATGCATT
TACCCACCGAGCCATGAGCGTAGCCGACAACCAGACAGGAGATGTCGCGA
TTAACCAGTATTACATGTACAAGCAAGGTACTCCTCCTATCAAGCCCGAA
AAGCTTTATCTCTCTAATATGTCAATACCGTAGACATCCAACGCATCGCC
GCGATGGGCGTACCAGCATACTCCTTCTCTGTCTCCTGGTCCAGAATCTT
CCCCTTCGGCAACGGCCCCATCAACGAAGCAGGTCTGCAGTACTATGACG
ACGTAATCAACACCTGCCTAGAATACGGCGTCAAACCCCAAGTGACACTG
TACCATTGGGACCTGCCCTTATACCTCCAGCTCTCCTACGGAGGCTGGAC
AAGCGAAAAGATCGTCGACGACTTCGTCGCCTATGCCAAGGTCCTCTTAG
AGCGATGGGGCGACAAAGTCTGGCAATGGTACACATTCAACGAACCGCAC
TCCTTCTGCGGCGAATACCCAGTACCAGATGGATATTTCCCGCGCACCAC
GTCCATCCCCGACGTCCAGCAACCCTACTGGTGCGGACACTACATGCTTA
TCGCCGCGGGAAAAACATACCAACTTGCACGTTCAATGAACATCACAGCA
CCCATCAGCATCAAGAATAACGGCGGCTACAAGCTCCCTCGAACTGCTTC
CCCAGAAGACGCAGAAGCCGTCGAGCGCGCCTGGGCATTCAACGAAGGAT
GGTTCGCGGACCCCCTGTTCCTAGGCGACTATCCATCCCGGCTGAAGAAC
TTCACCTCGAGCTTCTTACCCGAGTTCACGACCGAAGAGCGGGACATGAT
CAAGGGAGCAAGTGATTACTTCGCGCACGACGCCTACACAGCGGCATACT
ACATGGCACCTGATGCAGGGATCGAGGGGTGTCTGTCTGACCCCAGTAAC
AGCCTATACCCGGAATGCTATAATTCCTCCTATACGTTGCCAGAATCCGA
AGGCGGTTGGCTTGTTGGCCCGGCGTCCGATCCTAATACCCGCTGGCTTC
ATAAGGCTACTGAGTGGCTGCCTCAGTTCCTGCACTATATCCAGGATACG
TGGAAGCCCGAGAATGGCATAGCCATCACTGAGTTCGGATTTTCGGAGCC
GTTTGAGGCGTATAAGACTCTGCGCGAGGATATATTGACGGATCCTTTGA
GGACGCTCTATTACCACGACTATGTGCAGGCAATGTTGATGGCTGTCGCC
GAGGGGGTTAAACTTGTGGGATGTTCGGCTTGGAGCATTGCTGATAATAT
TGAGTGGACTGCGGGGTTTACTGTTAAGTTTGGATTGCAGGTGAGTTTAC
TTTCCTTCTGTAGGAAAATGGGTATTACTAACTCTGTTGTTTTGTAGTAT
GTCAATTTGACCACGCAAGAGCGCTTCTACAAGGCTAGTTTCTTTGAACT
GGCAAATTTGTTCCGGACATATATCAAGGAGTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000016.1:566740..568623-

>ATCC64974_88600-T1 ID=ATCC64974_88600-T1|Name=ATCC64974_88600-T1|organism=Aspergillus niger N402|type=CDS|length=6840bp|location=Sequence derived from alignment at OGUI01000016.1:566740..568623- (Aspergillus niger N402)
TATGTCAATTTGACCACGCAAGAGCGCTTCTACAAGGCTAGTTTCTTTGA
ACTGGCAAATTTGTTCCGGACATATATCAAGGAGTAGACATCCAACGCAT
CGCCGCGATGGGCGTACCAGCATACTCCTTCTCTGTCTCCTGGTCCAGAA
TCTTCCCCTTCGGCAACGGCCCCATCAACGAAGCAGGTCTGCAGTACTAT
GACGACGTAATCAACACCTGCCTAGAATACGGCGTCAAACCCCAAGTGAC
ACTGTACCATTGGGACCTGCCCTTATACCTCCAGCTCTCCTACGGAGGCT
GGACAAGCGAAAAGATCGTCGACGACTTCGTCGCCTATGCCAAGGTCCTC
TTAGAGCGATGGGGCGACAAAGTCTGGCAATGGTACACATTCAACGAACC
GCACTCCTTCTGCGGCGAATACCCAGTACCAGATGGATATTTCCCGCGCA
CCACGTCCATCCCCGACGTCCAGCAACCCTACTGGTGCGGACACTACATG
CTTATCGCCGCGGGAAAAACATACCAACTTGCACGTTCAATGAACATCAC
AGCACCCATCAGCATCAAGAATAACGGCGGCTACAAGCTCCCTCGAACTG
CTTCCCCAGAAGACGCAGAAGCCGTCGAGCGCGCCTGGGCATTCAACGAA
GGATGGTTCGCGGACCCCCTGTTCCTAGGCGACTATCCATCCCGGCTGAA
GAACTTCACCTCGAGCTTCTTACCCGAGTTCACGACCGAAGAGCGGGACA
TGATCAAGGGAGCAAGTGATTACTTCGCGCACGACGCCTACACAGCGGCA
TACTACATGGCACCTGATGCAGGGATCGAGGGGTGTCTGTCTGACCCCAG
TAACAGCCTATACCCGGAATGCTATAATTCCTCCTATACGTTGCCAGAAT
CCGAAGGCGGTTGGCTTGTTGGCCCGGCGTCCGATCCTAATACCCGCTGG
CTTCATAAGGCTACTGAGTGGCTGCCTCAGTTCCTGCACTATATCCAGGA
TACGTGGAAGCCCGAGAATGGCATAGCCATCACTGAGTTCGGATTTTCGG
AGCCGTTTGAGGCGTATAAGACTCTGCGCGAGGATATATTGACGGATCCT
TTGAGGACGCTCTATTACCACGACTATGTGCAGGCAATGTTGATGGCTGT
CGCCGAGGGGGTTAAACTTGTGGGATGTTCGGCTTGGAGCATTGCTGATA
ATATTGAGTGGACTGCGGGGTTTACTGTTAAGTTTGGATTGCAGATTTAT
GGAACCTATATATTGGCCCCGTTGAGACTGCCTCGATCAACACCACCGTT
GAACCTACTCCAATTCCATCTGCCGAACTGATCCCCCCTCCCCCACTCTA
CTACCCCTCCTACTTACCAGGAGCCCAGATCCCAGGACTACGAAGAAACG
AAAGCTGGTCATTCCCCAAAGGGTTCTGGTGGGGCGTATCAAGCGCCTCA
TATCAAGTCGAAGGGGCCGTCAAAGCAGATGGCCGGGGCCCTAGCTTATG
GGATGCATTTACCCACCGAGCCATGAGCGTAGCCGACAACCAGACAGGAG
ATGTCGCGATTAACCAGTATTACATGTACAAGCAAGATGCATCCTCACGT
CCTCTGCCTAGGGCTGCTGCTTGCTAGTAGTAATGCAGCTGCAGTTTCCA
GCACTGCCAGTTCTACAGCTGCATCCCCTCTGGTGACCACTCTGAACATC
ACTGTAGAAGTATGTCAATTTGACCACGCAAGAGCGCTTCTACAAGGCTA
GTTTCTTTGAACTGGCAAATTTGTTCCGGACATATATCAAGGAGTAGACA
TCCAACGCATCGCCGCGATGGGCGTACCAGCATACTCCTTCTCTGTCTCC
TGGTCCAGAATCTTCCCCTTCGGCAACGGCCCCATCAACGAAGCAGGTCT
GCAGTACTATGACGACGTAATCAACACCTGCCTAGAATACGGCGTCAAAC
CCCAAGTGACACTGTACCATTGGGACCTGCCCTTATACCTCCAGCTCTCC
TACGGAGGCTGGACAAGCGAAAAGATCGTCGACGACTTCGTCGCCTATGC
CAAGGTCCTCTTAGAGCGATGGGGCGACAAAGTCTGGCAATGGTACACAT
TCAACGAACCGCACTCCTTCTGCGGCGAATACCCAGTACCAGATGGATAT
TTCCCGCGCACCACGTCCATCCCCGACGTCCAGCAACCCTACTGGTGCGG
ACACTACATGCTTATCGCCGCGGGAAAAACATACCAACTTGCACGTTCAA
TGAACATCACAGCACCCATCAGCATCAAGAATAACGGCGGCTACAAGCTC
CCTCGAACTGCTTCCCCAGAAGACGCAGAAGCCGTCGAGCGCGCCTGGGC
ATTCAACGAAGGATGGTTCGCGGACCCCCTGTTCCTAGGCGACTATCCAT
CCCGGCTGAAGAACTTCACCTCGAGCTTCTTACCCGAGTTCACGACCGAA
GAGCGGGACATGATCAAGGGAGCAAGTGATTACTTCGCGCACGACGCCTA
CACAGCGGCATACTACATGGCACCTGATGCAGGGATCGAGGGGTGTCTGT
CTGACCCCAGTAACAGCCTATACCCGGAATGCTATAATTCCTCCTATACG
TTGCCAGAATCCGAAGGCGGTTGGCTTGTTGGCCCGGCGTCCGATCCTAA
TACCCGCTGGCTTCATAAGGCTACTGAGTGGCTGCCTCAGTTCCTGCACT
ATATCCAGGATACGTGGAAGCCCGAGAATGGCATAGCCATCACTGAGTTC
GGATTTTCGGAGCCGTTTGAGGCGTATAAGACTCTGCGCGAGGATATATT
GACGGATCCTTTGAGGACGCTCTATTACCACGACTATGTGCAGGCAATGT
TGATGGCTGTCGCCGAGGGGGTTAAACTTGTGGGATGTTCGGCTTGGAGC
ATTGCTGATAATATTGAGTGGACTGCGGGGTTTACTGTTAAGTTTGGATT
GCAGATTTATGGAACCTATATATTGGCCCCGTTGAGACTGCCTCGATCAA
CACCACCGTTGAACCTACTCCAATTCCATCTGCCGAACTGATCCCCCCTC
CCCCACTCTACTACCCCTCCTACTTACCAGGAGCCCAGATCCCAGGACTA
CGAAGAAACGAAAGCTGGTCATTCCCCAAAGGGTTCTGGTGGGGCGTATC
AAGCGCCTCATATCAAGTCGAAGGGGCCGTCAAAGCAGATGGCCGGGGCC
CTAGCTTATGGGATGCATTTACCCACCGAGCCATGAGCGTAGCCGACAAC
CAGACAGGAGATGTCGCGATTAACCAGTATTACATGTACAAGCAAGATGC
ATCCTCACGTCCTCTGCCTAGGGCTGCTGCTTGCTAGTAGTAATGCAGCT
GCAGTTTCCAGCACTGCCAGTTCTACAGCTGCATCCCCTCTGGTGACCAC
TCTGAACATCACTGTAGAAGTATGTCAATTTGACCACGCAAGAGCGCTTC
TACAAGGCTAGTTTCTTTGAACTGGCAAATTTGTTCCGGACATATATCAA
GGAGTAGACATCCAACGCATCGCCGCGATGGGCGTACCAGCATACTCCTT
CTCTGTCTCCTGGTCCAGAATCTTCCCCTTCGGCAACGGCCCCATCAACG
AAGCAGGTCTGCAGTACTATGACGACGTAATCAACACCTGCCTAGAATAC
GGCGTCAAACCCCAAGTGACACTGTACCATTGGGACCTGCCCTTATACCT
CCAGCTCTCCTACGGAGGCTGGACAAGCGAAAAGATCGTCGACGACTTCG
TCGCCTATGCCAAGGTCCTCTTAGAGCGATGGGGCGACAAAGTCTGGCAA
TGGTACACATTCAACGAACCGCACTCCTTCTGCGGCGAATACCCAGTACC
AGATGGATATTTCCCGCGCACCACGTCCATCCCCGACGTCCAGCAACCCT
ACTGGTGCGGACACTACATGCTTATCGCCGCGGGAAAAACATACCAACTT
GCACGTTCAATGAACATCACAGCACCCATCAGCATCAAGAATAACGGCGG
CTACAAGCTCCCTCGAACTGCTTCCCCAGAAGACGCAGAAGCCGTCGAGC
GCGCCTGGGCATTCAACGAAGGATGGTTCGCGGACCCCCTGTTCCTAGGC
GACTATCCATCCCGGCTGAAGAACTTCACCTCGAGCTTCTTACCCGAGTT
CACGACCGAAGAGCGGGACATGATCAAGGGAGCAAGTGATTACTTCGCGC
ACGACGCCTACACAGCGGCATACTACATGGCACCTGATGCAGGGATCGAG
GGGTGTCTGTCTGACCCCAGTAACAGCCTATACCCGGAATGCTATAATTC
CTCCTATACGTTGCCAGAATCCGAAGGCGGTTGGCTTGTTGGCCCGGCGT
CCGATCCTAATACCCGCTGGCTTCATAAGGCTACTGAGTGGCTGCCTCAG
TTCCTGCACTATATCCAGGATACGTGGAAGCCCGAGAATGGCATAGCCAT
CACTGAGTTCGGATTTTCGGAGCCGTTTGAGGCGTATAAGACTCTGCGCG
AGGATATATTGACGGATCCTTTGAGGACGCTCTATTACCACGACTATGTG
CAGGCAATGTTGATGGCTGTCGCCGAGGGGGTTAAACTTGTGGGATGTTC
GGCTTGGAGCATTGCTGATAATATTGAGTGGACTGCGGGGTTTACTGTTA
AGTTTGGATTGCAGATTTATGGAACCTATATATTGGCCCCGTTGAGACTG
CCTCGATCAACACCACCGTTGAACCTACTCCAATTCCATCTGCCGAACTG
ATCCCCCCTCCCCCACTCTACTACCCCTCCTACTTACCAGGAGCCCAGAT
CCCAGGACTACGAAGAAACGAAAGCTGGTCATTCCCCAAAGGGTTCTGGT
GGGGCGTATCAAGCGCCTCATATCAAGTCGAAGGGGCCGTCAAAGCAGAT
GGCCGGGGCCCTAGCTTATGGGATGCATTTACCCACCGAGCCATGAGCGT
AGCCGACAACCAGACAGGAGATGTCGCGATTAACCAGTATTACATGTACA
AGCAAGATGCATCCTCACGTCCTCTGCCTAGGGCTGCTGCTTGCTAGTAG
TAATGCAGCTGCAGTTTCCAGCACTGCCAGTTCTACAGCTGCATCCCCTC
TGGTGACCACTCTGAACATCACTGTAGAAGTATGTCAATTTGACCACGCA
AGAGCGCTTCTACAAGGCTAGTTTCTTTGAACTGGCAAATTTGTTCCGGA
CATATATCAAGGAGTAGACATCCAACGCATCGCCGCGATGGGCGTACCAG
CATACTCCTTCTCTGTCTCCTGGTCCAGAATCTTCCCCTTCGGCAACGGC
CCCATCAACGAAGCAGGTCTGCAGTACTATGACGACGTAATCAACACCTG
CCTAGAATACGGCGTCAAACCCCAAGTGACACTGTACCATTGGGACCTGC
CCTTATACCTCCAGCTCTCCTACGGAGGCTGGACAAGCGAAAAGATCGTC
GACGACTTCGTCGCCTATGCCAAGGTCCTCTTAGAGCGATGGGGCGACAA
AGTCTGGCAATGGTACACATTCAACGAACCGCACTCCTTCTGCGGCGAAT
ACCCAGTACCAGATGGATATTTCCCGCGCACCACGTCCATCCCCGACGTC
CAGCAACCCTACTGGTGCGGACACTACATGCTTATCGCCGCGGGAAAAAC
ATACCAACTTGCACGTTCAATGAACATCACAGCACCCATCAGCATCAAGA
ATAACGGCGGCTACAAGCTCCCTCGAACTGCTTCCCCAGAAGACGCAGAA
GCCGTCGAGCGCGCCTGGGCATTCAACGAAGGATGGTTCGCGGACCCCCT
GTTCCTAGGCGACTATCCATCCCGGCTGAAGAACTTCACCTCGAGCTTCT
TACCCGAGTTCACGACCGAAGAGCGGGACATGATCAAGGGAGCAAGTGAT
TACTTCGCGCACGACGCCTACACAGCGGCATACTACATGGCACCTGATGC
AGGGATCGAGGGGTGTCTGTCTGACCCCAGTAACAGCCTATACCCGGAAT
GCTATAATTCCTCCTATACGTTGCCAGAATCCGAAGGCGGTTGGCTTGTT
GGCCCGGCGTCCGATCCTAATACCCGCTGGCTTCATAAGGCTACTGAGTG
GCTGCCTCAGTTCCTGCACTATATCCAGGATACGTGGAAGCCCGAGAATG
GCATAGCCATCACTGAGTTCGGATTTTCGGAGCCGTTTGAGGCGTATAAG
ACTCTGCGCGAGGATATATTGACGGATCCTTTGAGGACGCTCTATTACCA
CGACTATGTGCAGGCAATGTTGATGGCTGTCGCCGAGGGGGTTAAACTTG
TGGGATGTTCGGCTTGGAGCATTGCTGATAATATTGAGTGGACTGCGGGG
TTTACTGTTAAGTTTGGATTGCAGATTTATGGAACCTATATATTGGCCCC
GTTGAGACTGCCTCGATCAACACCACCGTTGAACCTACTCCAATTCCATC
TGCCGAACTGATCCCCCCTCCCCCACTCTACTACCCCTCCTACTTACCAG
GAGCCCAGATCCCAGGACTACGAAGAAACGAAAGCTGGTCATTCCCCAAA
GGGTTCTGGTGGGGCGTATCAAGCGCCTCATATCAAGTCGAAGGGGCCGT
CAAAGCAGATGGCCGGGGCCCTAGCTTATGGGATGCATTTACCCACCGAG
CCATGAGCGTAGCCGACAACCAGACAGGAGATGTCGCGATTAACCAGTAT
TACATGTACAAGCAAGATGCATCCTCACGTCCTCTGCCTAGGGCTGCTGC
TTGCTAGTAGTAATGCAGCTGCAGTTTCCAGCACTGCCAGTTCTACAGCT
GCATCCCCTCTGGTGACCACTCTGAACATCACTGTAGAAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_88600ATCC64974_88600Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_88600-T1ATCC64974_88600-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_88600-T1.cdsATCC64974_88600-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_88600-T1.exon4ATCC64974_88600-T1.exon4Aspergillus niger N402exon
ATCC64974_88600-T1.exon3ATCC64974_88600-T1.exon3Aspergillus niger N402exon
ATCC64974_88600-T1.exon2ATCC64974_88600-T1.exon2Aspergillus niger N402exon
ATCC64974_88600-T1.exon1ATCC64974_88600-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
NoteCAZy:GH5_19
NoteCAZy:GH1
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR033132
DBxrefInterPro:IPR001360
DBxrefPFAM:PF00232
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:566740..568623 -
Powered by Drupal