You are here

Home

ATCC64974_88650-T1, ATCC64974_88650-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_88650-T1
Unique NameATCC64974_88650-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:584906..585592+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_88650-T1 ID=ATCC64974_88650-T1|Name=ATCC64974_88650-T1|organism=Aspergillus niger N402|type=mRNA|length=687bp|location=Sequence derived from alignment at OGUI01000016.1:584906..585592+ (Aspergillus niger N402)
ATGTCCGAACAAACCATAACCCTGCACACCTACTTCCGCTCCTCCTGCTC
CGCGCGCCTCCGCATCGCCCTCAACCTAAAATCCCTCCCCTACACCTCCA
TCCCCATCAACCTACTCAAAAACGAGCACCACCAGAGCCAAAACACATCC
CTAAACCCCTCCGCCAGCGTGCCCACCCTCATCATCGAAAACCCCGATGG
AAAATCAATCATAATCCCCCAATCCCTTGCCGCGCTCGAATACCTCGAAG
AAACCCACCCCCAAGCGCACCCCCTCCTCCCACCACTCTCCGACCCCACC
GCGCGCGCAACAGTCCGCACCCTCTCCAGCATCATCGCCTGCGACGTGCA
GCCGGTCACGAACATGCGGATCCTGAAGCGGGTGGCGCCGCTCGGTGTGG
ACAGGGAAACATGGTCGAAGGATTTAGTGGAGGATGGGTTCCGGGCGTAC
GAGGCTATTGCGGAGAAAACAGCAGGAAAATATAGTGTTGGAGATGAGAT
TACCTTGGCGGACGTATGTCTTTTGCCTGCTGTTTGGGGGGCGGAGAGGG
TAGGTGTGGATTTGGGGAATTTTCCGGTTATTAAGGGGGTTAGGGAGAGG
CTGGAAGAGGTGGAGGCTGTGAAGAGGGCGCATTGGAGATGTCAGGGCGA
TACGCCGGAGGAGTTTAGGGTTGGTGATAGGCAGTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000016.1:584906..585592+

>ATCC64974_88650-T1 ID=ATCC64974_88650-T1|Name=ATCC64974_88650-T1|organism=Aspergillus niger N402|type=CDS|length=687bp|location=Sequence derived from alignment at OGUI01000016.1:584906..585592+ (Aspergillus niger N402)
ATGTCCGAACAAACCATAACCCTGCACACCTACTTCCGCTCCTCCTGCTC
CGCGCGCCTCCGCATCGCCCTCAACCTAAAATCCCTCCCCTACACCTCCA
TCCCCATCAACCTACTCAAAAACGAGCACCACCAGAGCCAAAACACATCC
CTAAACCCCTCCGCCAGCGTGCCCACCCTCATCATCGAAAACCCCGATGG
AAAATCAATCATAATCCCCCAATCCCTTGCCGCGCTCGAATACCTCGAAG
AAACCCACCCCCAAGCGCACCCCCTCCTCCCACCACTCTCCGACCCCACC
GCGCGCGCAACAGTCCGCACCCTCTCCAGCATCATCGCCTGCGACGTGCA
GCCGGTCACGAACATGCGGATCCTGAAGCGGGTGGCGCCGCTCGGTGTGG
ACAGGGAAACATGGTCGAAGGATTTAGTGGAGGATGGGTTCCGGGCGTAC
GAGGCTATTGCGGAGAAAACAGCAGGAAAATATAGTGTTGGAGATGAGAT
TACCTTGGCGGACGTATGTCTTTTGCCTGCTGTTTGGGGGGCGGAGAGGG
TAGGTGTGGATTTGGGGAATTTTCCGGTTATTAAGGGGGTTAGGGAGAGG
CTGGAAGAGGTGGAGGCTGTGAAGAGGGCGCATTGGAGATGTCAGGGCGA
TACGCCGGAGGAGTTTAGGGTTGGTGATAGGCAGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0009072aromatic amino acid family metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_88650ATCC64974_88650Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_88650-T1.exon1ATCC64974_88650-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_88650-T1.cdsATCC64974_88650-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_88650-T1ATCC64974_88650-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR034330
DBxrefInterPro:IPR034333
DBxrefInterPro:IPR010987
DBxrefInterPro:IPR040079
DBxrefInterPro:IPR005955
DBxrefInterPro:IPR004046
DBxrefInterPro:IPR004045
DBxrefPFAM:PF13417
DBxrefPFAM:PF13409
DBxrefPFAM:PF02798
DBxrefPFAM:PF14497
DBxrefPFAM:PF00043
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:584906..585592 +
Powered by Drupal