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ATCC64974_88960-T1, ATCC64974_88960-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_88960-T1
Unique NameATCC64974_88960-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:682088..683094-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_88960-T1 ID=ATCC64974_88960-T1|Name=ATCC64974_88960-T1|organism=Aspergillus niger N402|type=mRNA|length=1007bp|location=Sequence derived from alignment at OGUI01000016.1:682088..683094- (Aspergillus niger N402)
ATGGCCTCCCCCACCGCGGCCAAAGAGCCCCAGCCCGCCGTCGATTTCCT
CCATCACCCTTACACCCGTGCTGCTCTTCCCTTCGTGAATGGTGGCCTGG
CCGGCATGACCGCCACGGTCGTGATCCAGCCCATCGACATGATCAAAGTC
CGTTTGCAGCTCGCCGGTGAAGGTGTGCGCACCGGTCCCCGCCCGTCTGC
CTTTGGCGTGGCCCGCGACATCATTGCCTCAGGCAAAGCACTTGATCTGT
ACACCGGTCTGTCGGCTGGACTGCTGCGCCAGGCCGTTTACACTACCGCC
CGCCTGGGTTTCTTCGACACCTTCAGCAAGACTCTCAACAAGCGTGCCGA
AGCCGCCAACCGCAGCGTCACCTTCGCCGAACGTGCCGGTGCCGGTCTAG
CTGCCGGAGGTATTGCCGCCATGATTGGCAACCCGGCCGATCTGGCACTG
GTGCGTATGCAGTCAGACGGTCTCAAACCTCCCGAGGCGCGGGCCAACTA
CCGCTCCGTCATGGACGCGCTCTTCCGCATCTCCAAGCACGAAGGTGTCC
CGGCTCTGTGGGCTGGTGCTTTCCCTACCGTCATCCGTGCCATGGCGCTC
AACGTCGGCCAGTTGACCTTCTTTGCCGAGTCCAAGGCGCAGCTGAAGAA
GCACACTAGCCTGTCGACTCAGAACCAGACCTTTGCCGCGTCCGCTATCG
CGGGATTCTTTGCCAGTTTCCTCTCCCTGCCTTTCGACTTTGTCAAGACT
CGCCTGCAGAAGCAGCAGAAGGATCCGAAGACCGGTCGGCTCCCCTACAA
GGGCGTCTTGGATTGCGCGCGCAAGGTCGTCCAGGAGGAGGGCTGGTTGC
GGTTCTACCGCGGTTTCGGAACGTACTATGTGCGGATCGCTCCTCATGCG
TTAGTGTCCCCACCATTTTCTATCAGACTAGTGCCCTTGGCTAACCCCAG
ACCCACAGGATGGTGACGCTTATCGTGGCCGATTATCTGAACTTGATTAC
CAAGTAG
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Coding sequence (CDS) from alignment at OGUI01000016.1:682088..683094-

>ATCC64974_88960-T1 ID=ATCC64974_88960-T1|Name=ATCC64974_88960-T1|organism=Aspergillus niger N402|type=CDS|length=1896bp|location=Sequence derived from alignment at OGUI01000016.1:682088..683094- (Aspergillus niger N402)
GATGGTGACGCTTATCGTGGCCGATTATCTGAACTTGATTACCAAGTAGA
TGGCCTCCCCCACCGCGGCCAAAGAGCCCCAGCCCGCCGTCGATTTCCTC
CATCACCCTTACACCCGTGCTGCTCTTCCCTTCGTGAATGGTGGCCTGGC
CGGCATGACCGCCACGGTCGTGATCCAGCCCATCGACATGATCAAAGTCC
GTTTGCAGCTCGCCGGTGAAGGTGTGCGCACCGGTCCCCGCCCGTCTGCC
TTTGGCGTGGCCCGCGACATCATTGCCTCAGGCAAAGCACTTGATCTGTA
CACCGGTCTGTCGGCTGGACTGCTGCGCCAGGCCGTTTACACTACCGCCC
GCCTGGGTTTCTTCGACACCTTCAGCAAGACTCTCAACAAGCGTGCCGAA
GCCGCCAACCGCAGCGTCACCTTCGCCGAACGTGCCGGTGCCGGTCTAGC
TGCCGGAGGTATTGCCGCCATGATTGGCAACCCGGCCGATCTGGCACTGG
TGCGTATGCAGTCAGACGGTCTCAAACCTCCCGAGGCGCGGGCCAACTAC
CGCTCCGTCATGGACGCGCTCTTCCGCATCTCCAAGCACGAAGGTGTCCC
GGCTCTGTGGGCTGGTGCTTTCCCTACCGTCATCCGTGCCATGGCGCTCA
ACGTCGGCCAGTTGACCTTCTTTGCCGAGTCCAAGGCGCAGCTGAAGAAG
CACACTAGCCTGTCGACTCAGAACCAGACCTTTGCCGCGTCCGCTATCGC
GGGATTCTTTGCCAGTTTCCTCTCCCTGCCTTTCGACTTTGTCAAGACTC
GCCTGCAGAAGCAGCAGAAGGATCCGAAGACCGGTCGGCTCCCCTACAAG
GGCGTCTTGGATTGCGCGCGCAAGGTCGTCCAGGAGGAGGGCTGGTTGCG
GTTCTACCGCGGTTTCGGAACGTACTATGTGCGGATCGCTCCTCATGCGA
TGGTGACGCTTATCGTGGCCGATTATCTGAACTTGATTACCAAGTAGATG
GCCTCCCCCACCGCGGCCAAAGAGCCCCAGCCCGCCGTCGATTTCCTCCA
TCACCCTTACACCCGTGCTGCTCTTCCCTTCGTGAATGGTGGCCTGGCCG
GCATGACCGCCACGGTCGTGATCCAGCCCATCGACATGATCAAAGTCCGT
TTGCAGCTCGCCGGTGAAGGTGTGCGCACCGGTCCCCGCCCGTCTGCCTT
TGGCGTGGCCCGCGACATCATTGCCTCAGGCAAAGCACTTGATCTGTACA
CCGGTCTGTCGGCTGGACTGCTGCGCCAGGCCGTTTACACTACCGCCCGC
CTGGGTTTCTTCGACACCTTCAGCAAGACTCTCAACAAGCGTGCCGAAGC
CGCCAACCGCAGCGTCACCTTCGCCGAACGTGCCGGTGCCGGTCTAGCTG
CCGGAGGTATTGCCGCCATGATTGGCAACCCGGCCGATCTGGCACTGGTG
CGTATGCAGTCAGACGGTCTCAAACCTCCCGAGGCGCGGGCCAACTACCG
CTCCGTCATGGACGCGCTCTTCCGCATCTCCAAGCACGAAGGTGTCCCGG
CTCTGTGGGCTGGTGCTTTCCCTACCGTCATCCGTGCCATGGCGCTCAAC
GTCGGCCAGTTGACCTTCTTTGCCGAGTCCAAGGCGCAGCTGAAGAAGCA
CACTAGCCTGTCGACTCAGAACCAGACCTTTGCCGCGTCCGCTATCGCGG
GATTCTTTGCCAGTTTCCTCTCCCTGCCTTTCGACTTTGTCAAGACTCGC
CTGCAGAAGCAGCAGAAGGATCCGAAGACCGGTCGGCTCCCCTACAAGGG
CGTCTTGGATTGCGCGCGCAAGGTCGTCCAGGAGGAGGGCTGGTTGCGGT
TCTACCGCGGTTTCGGAACGTACTATGTGCGGATCGCTCCTCATGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MIC33ATCC64974_88960Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_88960-T1ATCC64974_88960-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_88960-T1.cdsATCC64974_88960-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_88960-T1.exon2ATCC64974_88960-T1.exon2Aspergillus niger N402exon
ATCC64974_88960-T1.exon1ATCC64974_88960-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000161.4
DBxrefInterPro:IPR018108
DBxrefInterPro:IPR023395
DBxrefInterPro:IPR002067
DBxrefPFAM:PF00153
ProductPutative mitochondrial 2-oxoglutarate/malate carrier protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:682088..683094 -
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