You are here

Home

ATCC64974_89060-T1, ATCC64974_89060-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_89060-T1
Unique NameATCC64974_89060-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:716154..718490+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_89060-T1 ID=ATCC64974_89060-T1|Name=ATCC64974_89060-T1|organism=Aspergillus niger N402|type=mRNA|length=2337bp|location=Sequence derived from alignment at OGUI01000016.1:716154..718490+ (Aspergillus niger N402)
ATGAATCATCCCGATCAGACAGCAGACGAAGCAGGCAACGTTCCGTCCGC
GCACTCCACTAACAAGCCCAAAGTGCGTCTGAGCTGTGAAACCTGTCGGC
AGCGCAAAGTCAAATGCGACAAGCTCAACCCATGCACGAACTGCCAGCGT
CTCGGAACGAGATGCGTTCCCGTTGAACGGGCACGTCTGCCACGCGGCAG
ATCCGGCAGACCAGCAACGGAGCGACCAGGCGACCAGGATGCGAACCTGA
AGGACCGTGTTTCAAAGCTGGAAAGCATCATCCGTGAACTTGCTCGCGGG
GGCAGTCAGGCCTCCGCTCGGGCTATTCTAGCTGCTGCTGTCGATGAAGG
CTCACAGGCTGGCTCGTCGGATGGAGAGCATGGCGATGACGATGACTCGC
AGCCCGGTCGTGTTCGGACTCCTGATACGTATTTGGGGTCTTCGTTCTGG
GCTAGTCTCCTGAATGAGGTGAGCCCATGGCTAAACTTGACTACACGTAC
CCAGTAATCTGATTTACTTAGTTAACTCCTGGACAGGTGCCGGATGTACA
TCCCAGTGAGCAAAGTGGTTCAAAGGAAGACCACCGTAATGCTGAGAACA
GCAACCTAATCAACTACCGTCGACTTTTCTCCATGGCAAGTGGTAATGAC
TCTACAAACAGCAATTCTCCGGGCCCCTCGCCTGCCCATCAGCAGCTATG
TTGTATATTCATGCACAGGGTAGACCCGCTCTGCAAGATCCTCCACAGGC
CCTCGGTGAAGGAATTCCTCGTGGATGGAAAGCCCTACCTGGACTATGAG
CCAGGACATCTGGCCCCGACTGCTCTGGCATACGCCGTATACTTCGCCGC
CTCATGCAGTCTCCACGACGAAGAGAGCATGCGCTGCTTCGGCATCCCCA
AGTCATCCATGGTAGCAAAGTACCAAAAAGAAGCCGAAGCAGCACTCGCC
CGAGCAGACTTCATCACCACCAACGACCTCACCGTCCTACAAGCCTACGT
CCTCTTCCTCGTACGTTGTTTCTCCCGCGCCATTCACACCCATACCACTA
ACCCTTCCATTCCAGCTCGCCCTCCGCTCCCAAGACCAAAGCCGCCGCAT
GTGGACAATGCTCAGCATGGCCCTACGCATCGCGCAAGCTCTCTCCCTCC
ACATCCCCGACCCTCCATTTCACGTAACCCCCTTCGAGCGCGAACTACGG
CGCCGTGTCTGGCTTGCCATCGGCTTCCTCGACGTCCAAGCATCAATGGA
CCGCGCCTCCGAGCCAATGATGCAAGCCGCCTGGCTAGAATCCCACCCGC
CAGCAAACGTAAACGACATTGACATAAGCCCAACCATGACCTCAAATCCA
CCCGACTCCCCGGGCTTCACAGACATGACCTTCACAATGATGGTTCGTAA
AGCTCAATACGTAACCCGATCGCTCAACTTCTCCGACTTCATGGAACCCT
CCATCAACACGCTCGCCATCCGCCAACAACTCGTCCTCGAATTCCAACAC
TCCGTCTCCAAACTCCTCGCCCACGCCTCCCCCACTACAAATTCCCTGCA
TTGGCTCACAACAGCCGTAGCAGAATGCACTCACGCCTCAATGCAACTCA
TCACCCTGCGACCCCTCCAACGCGCCCCAAACTTCACTCCGCCCCTCGTC
CGTGGCGACCGTCTCCTCGAATTCGCCGTCAACGTGCTCACCACCTCGCA
TCGTCTCCGCTCAGATCCCCGTTTCACTACCTACAAATGGATCGAATTCG
CCTTCCCACCATGGCATAGTCTGGCTGTTGCGCTGGCGGAACTCTGCGTC
TGCGACGACAAAGCCGTCATGGAACGCTTCTGGGATCCGGTCGAGTATAC
CTTCCAACATCTGGGAAGAATAATTGCTGATTCGCAACGGGGGATGCTGT
GGAAACCTATGGTGAAGCTGATGGATAGGGCGAAGGATAGGCGGAGGGAG
CTGCTTTCCACATCTACTACTATTTCTTCCGGCACTGGCTCTGGTCCTTC
TTCATCCAACCTCAATCCTGGTTCGGCTATCAGCTCAGAGCAGTTTTCTC
CACTGGATTTATCTATCCAGCAACAGCAGAAGGAGCAGGAGCAGCAACCG
TCTATGGCTATGCAGATAGACACGCAAAACTTCATGCACACACCTGAGAA
CAGTAGTCTTGATGGTGCGGCAGCGGCAGCGGCAGTCGCTGCGTCTGCGT
GGCCGAATGTCTGGGACGCGGTGGATTTCAGCTACACGGGTCCAGGACTA
GGAAGTATGCAGATGGCGTGGGCGAATTACGAGAACTTTGTTGCGGATTT
CTATGTGAATGTTGATGATCCGGAGATTAACCGGTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000016.1:716154..718490+

>ATCC64974_89060-T1 ID=ATCC64974_89060-T1|Name=ATCC64974_89060-T1|organism=Aspergillus niger N402|type=CDS|length=6642bp|location=Sequence derived from alignment at OGUI01000016.1:716154..718490+ (Aspergillus niger N402)
ATGAATCATCCCGATCAGACAGCAGACGAAGCAGGCAACGTTCCGTCCGC
GCACTCCACTAACAAGCCCAAAGTGCGTCTGAGCTGTGAAACCTGTCGGC
AGCGCAAAGTCAAATGCGACAAGCTCAACCCATGCACGAACTGCCAGCGT
CTCGGAACGAGATGCGTTCCCGTTGAACGGGCACGTCTGCCACGCGGCAG
ATCCGGCAGACCAGCAACGGAGCGACCAGGCGACCAGGATGCGAACCTGA
AGGACCGTGTTTCAAAGCTGGAAAGCATCATCCGTGAACTTGCTCGCGGG
GGCAGTCAGGCCTCCGCTCGGGCTATTCTAGCTGCTGCTGTCGATGAAGG
CTCACAGGCTGGCTCGTCGGATGGAGAGCATGGCGATGACGATGACTCGC
AGCCCGGTCGTGTTCGGACTCCTGATACGTATTTGGGGTCTTCGTTCTGG
GCTAGTCTCCTGAATGAGGTGCCGGATGTACATCCCAGTGAGCAAAGTGG
TTCAAAGGAAGACCACCGTAATGCTGAGAACAGCAACCTAATCAACTACC
GTCGACTTTTCTCCATGGCAAGTGGTAATGACTCTACAAACAGCAATTCT
CCGGGCCCCTCGCCTGCCCATCAGCAGCTATGTTGTATATTCATGCACAG
GGTAGACCCGCTCTGCAAGATCCTCCACAGGCCCTCGGTGAAGGAATTCC
TCGTGGATGGAAAGCCCTACCTGGACTATGAGCCAGGACATCTGGCCCCG
ACTGCTCTGGCATACGCCGTATACTTCGCCGCCTCATGCAGTCTCCACGA
CGAAGAGAGCATGCGCTGCTTCGGCATCCCCAAGTCATCCATGGTAGCAA
AGTACCAAAAAGAAGCCGAAGCAGCACTCGCCCGAGCAGACTTCATCACC
ACCAACGACCTCACCGTCCTACAAGCCTACGTCCTCTTCCTCCTCGCCCT
CCGCTCCCAAGACCAAAGCCGCCGCATGTGGACAATGCTCAGCATGGCCC
TACGCATCGCGCAAGCTCTCTCCCTCCACATCCCCGACCCTCCATTTCAC
GTAACCCCCTTCGAGCGCGAACTACGGCGCCGTGTCTGGCTTGCCATCGG
CTTCCTCGACGTCCAAGCATCAATGGACCGCGCCTCCGAGCCAATGATGC
AAGCCGCCTGGCTAGAATCCCACCCGCCAGCAAACGTAAACGACATTGAC
ATAAGCCCAACCATGACCTCAAATCCACCCGACTCCCCGGGCTTCACAGA
CATGACCTTCACAATGATGGTTCGTAAAGCTCAATACGTAACCCGATCGC
TCAACTTCTCCGACTTCATGGAACCCTCCATCAACACGCTCGCCATCCGC
CAACAACTCGTCCTCGAATTCCAACACTCCGTCTCCAAACTCCTCGCCCA
CGCCTCCCCCACTACAAATTCCCTGCATTGGCTCACAACAGCCGTAGCAG
AATGCACTCACGCCTCAATGCAACTCATCACCCTGCGACCCCTCCAACGC
GCCCCAAACTTCACTCCGCCCCTCGTCCGTGGCGACCGTCTCCTCGAATT
CGCCGTCAACGTGCTCACCACCTCGCATCGTCTCCGCTCAGATCCCCGTT
TCACTACCTACAAATGGATCGAATTCGCCTTCCCACCATGGCATAGTCTG
GCTGTTGCGCTGGCGGAACTCTGCGTCTGCGACGACAAAGCCGTCATGGA
ACGCTTCTGGGATCCGGTCGAGTATACCTTCCAACATCTGGGAAGAATAA
TTGCTGATTCGCAACGGGGGATGCTGTGGAAACCTATGGTGAAGCTGATG
GATAGGGCGAAGGATAGGCGGAGGGAGCTGCTTTCCACATCTACTACTAT
TTCTTCCGGCACTGGCTCTGGTCCTTCTTCATCCAACCTCAATCCTGGTT
CGGCTATCAGCTCAGAGCAGTTTTCTCCACTGGATTTATCTATCCAGCAA
CAGCAGAAGGAGCAGGAGCAGCAACCGTCTATGGCTATGCAGATAGACAC
GCAAAACTTCATGCACACACCTGAGAACAGTAGTCTTGATGGTGCGGCAG
CGGCAGCGGCAGTCGCTGCGTCTGCGTGGCCGAATGTCTGGGACGCGGTG
GATTTCAGCTACACGGGTCCAGGACTAGGAAGTATGCAGATGGCGTGGGC
GAATTACGAGAACTTTGTTGCGGATTTCTATGTGAATGTTGATGATCCGG
AGATTAACCGGTGAATGAATCATCCCGATCAGACAGCAGACGAAGCAGGC
AACGTTCCGTCCGCGCACTCCACTAACAAGCCCAAAGTGCGTCTGAGCTG
TGAAACCTGTCGGCAGCGCAAAGTCAAATGCGACAAGCTCAACCCATGCA
CGAACTGCCAGCGTCTCGGAACGAGATGCGTTCCCGTTGAACGGGCACGT
CTGCCACGCGGCAGATCCGGCAGACCAGCAACGGAGCGACCAGGCGACCA
GGATGCGAACCTGAAGGACCGTGTTTCAAAGCTGGAAAGCATCATCCGTG
AACTTGCTCGCGGGGGCAGTCAGGCCTCCGCTCGGGCTATTCTAGCTGCT
GCTGTCGATGAAGGCTCACAGGCTGGCTCGTCGGATGGAGAGCATGGCGA
TGACGATGACTCGCAGCCCGGTCGTGTTCGGACTCCTGATACGTATTTGG
GGTCTTCGTTCTGGGCTAGTCTCCTGAATGAGGTGCCGGATGTACATCCC
AGTGAGCAAAGTGGTTCAAAGGAAGACCACCGTAATGCTGAGAACAGCAA
CCTAATCAACTACCGTCGACTTTTCTCCATGGCAAGTGGTAATGACTCTA
CAAACAGCAATTCTCCGGGCCCCTCGCCTGCCCATCAGCAGCTATGTTGT
ATATTCATGCACAGGGTAGACCCGCTCTGCAAGATCCTCCACAGGCCCTC
GGTGAAGGAATTCCTCGTGGATGGAAAGCCCTACCTGGACTATGAGCCAG
GACATCTGGCCCCGACTGCTCTGGCATACGCCGTATACTTCGCCGCCTCA
TGCAGTCTCCACGACGAAGAGAGCATGCGCTGCTTCGGCATCCCCAAGTC
ATCCATGGTAGCAAAGTACCAAAAAGAAGCCGAAGCAGCACTCGCCCGAG
CAGACTTCATCACCACCAACGACCTCACCGTCCTACAAGCCTACGTCCTC
TTCCTCCTCGCCCTCCGCTCCCAAGACCAAAGCCGCCGCATGTGGACAAT
GCTCAGCATGGCCCTACGCATCGCGCAAGCTCTCTCCCTCCACATCCCCG
ACCCTCCATTTCACGTAACCCCCTTCGAGCGCGAACTACGGCGCCGTGTC
TGGCTTGCCATCGGCTTCCTCGACGTCCAAGCATCAATGGACCGCGCCTC
CGAGCCAATGATGCAAGCCGCCTGGCTAGAATCCCACCCGCCAGCAAACG
TAAACGACATTGACATAAGCCCAACCATGACCTCAAATCCACCCGACTCC
CCGGGCTTCACAGACATGACCTTCACAATGATGGTTCGTAAAGCTCAATA
CGTAACCCGATCGCTCAACTTCTCCGACTTCATGGAACCCTCCATCAACA
CGCTCGCCATCCGCCAACAACTCGTCCTCGAATTCCAACACTCCGTCTCC
AAACTCCTCGCCCACGCCTCCCCCACTACAAATTCCCTGCATTGGCTCAC
AACAGCCGTAGCAGAATGCACTCACGCCTCAATGCAACTCATCACCCTGC
GACCCCTCCAACGCGCCCCAAACTTCACTCCGCCCCTCGTCCGTGGCGAC
CGTCTCCTCGAATTCGCCGTCAACGTGCTCACCACCTCGCATCGTCTCCG
CTCAGATCCCCGTTTCACTACCTACAAATGGATCGAATTCGCCTTCCCAC
CATGGCATAGTCTGGCTGTTGCGCTGGCGGAACTCTGCGTCTGCGACGAC
AAAGCCGTCATGGAACGCTTCTGGGATCCGGTCGAGTATACCTTCCAACA
TCTGGGAAGAATAATTGCTGATTCGCAACGGGGGATGCTGTGGAAACCTA
TGGTGAAGCTGATGGATAGGGCGAAGGATAGGCGGAGGGAGCTGCTTTCC
ACATCTACTACTATTTCTTCCGGCACTGGCTCTGGTCCTTCTTCATCCAA
CCTCAATCCTGGTTCGGCTATCAGCTCAGAGCAGTTTTCTCCACTGGATT
TATCTATCCAGCAACAGCAGAAGGAGCAGGAGCAGCAACCGTCTATGGCT
ATGCAGATAGACACGCAAAACTTCATGCACACACCTGAGAACAGTAGTCT
TGATGGTGCGGCAGCGGCAGCGGCAGTCGCTGCGTCTGCGTGGCCGAATG
TCTGGGACGCGGTGGATTTCAGCTACACGGGTCCAGGACTAGGAAGTATG
CAGATGGCGTGGGCGAATTACGAGAACTTTGTTGCGGATTTCTATGTGAA
TGTTGATGATCCGGAGATTAACCGGTGAATGAATCATCCCGATCAGACAG
CAGACGAAGCAGGCAACGTTCCGTCCGCGCACTCCACTAACAAGCCCAAA
GTGCGTCTGAGCTGTGAAACCTGTCGGCAGCGCAAAGTCAAATGCGACAA
GCTCAACCCATGCACGAACTGCCAGCGTCTCGGAACGAGATGCGTTCCCG
TTGAACGGGCACGTCTGCCACGCGGCAGATCCGGCAGACCAGCAACGGAG
CGACCAGGCGACCAGGATGCGAACCTGAAGGACCGTGTTTCAAAGCTGGA
AAGCATCATCCGTGAACTTGCTCGCGGGGGCAGTCAGGCCTCCGCTCGGG
CTATTCTAGCTGCTGCTGTCGATGAAGGCTCACAGGCTGGCTCGTCGGAT
GGAGAGCATGGCGATGACGATGACTCGCAGCCCGGTCGTGTTCGGACTCC
TGATACGTATTTGGGGTCTTCGTTCTGGGCTAGTCTCCTGAATGAGGTGC
CGGATGTACATCCCAGTGAGCAAAGTGGTTCAAAGGAAGACCACCGTAAT
GCTGAGAACAGCAACCTAATCAACTACCGTCGACTTTTCTCCATGGCAAG
TGGTAATGACTCTACAAACAGCAATTCTCCGGGCCCCTCGCCTGCCCATC
AGCAGCTATGTTGTATATTCATGCACAGGGTAGACCCGCTCTGCAAGATC
CTCCACAGGCCCTCGGTGAAGGAATTCCTCGTGGATGGAAAGCCCTACCT
GGACTATGAGCCAGGACATCTGGCCCCGACTGCTCTGGCATACGCCGTAT
ACTTCGCCGCCTCATGCAGTCTCCACGACGAAGAGAGCATGCGCTGCTTC
GGCATCCCCAAGTCATCCATGGTAGCAAAGTACCAAAAAGAAGCCGAAGC
AGCACTCGCCCGAGCAGACTTCATCACCACCAACGACCTCACCGTCCTAC
AAGCCTACGTCCTCTTCCTCCTCGCCCTCCGCTCCCAAGACCAAAGCCGC
CGCATGTGGACAATGCTCAGCATGGCCCTACGCATCGCGCAAGCTCTCTC
CCTCCACATCCCCGACCCTCCATTTCACGTAACCCCCTTCGAGCGCGAAC
TACGGCGCCGTGTCTGGCTTGCCATCGGCTTCCTCGACGTCCAAGCATCA
ATGGACCGCGCCTCCGAGCCAATGATGCAAGCCGCCTGGCTAGAATCCCA
CCCGCCAGCAAACGTAAACGACATTGACATAAGCCCAACCATGACCTCAA
ATCCACCCGACTCCCCGGGCTTCACAGACATGACCTTCACAATGATGGTT
CGTAAAGCTCAATACGTAACCCGATCGCTCAACTTCTCCGACTTCATGGA
ACCCTCCATCAACACGCTCGCCATCCGCCAACAACTCGTCCTCGAATTCC
AACACTCCGTCTCCAAACTCCTCGCCCACGCCTCCCCCACTACAAATTCC
CTGCATTGGCTCACAACAGCCGTAGCAGAATGCACTCACGCCTCAATGCA
ACTCATCACCCTGCGACCCCTCCAACGCGCCCCAAACTTCACTCCGCCCC
TCGTCCGTGGCGACCGTCTCCTCGAATTCGCCGTCAACGTGCTCACCACC
TCGCATCGTCTCCGCTCAGATCCCCGTTTCACTACCTACAAATGGATCGA
ATTCGCCTTCCCACCATGGCATAGTCTGGCTGTTGCGCTGGCGGAACTCT
GCGTCTGCGACGACAAAGCCGTCATGGAACGCTTCTGGGATCCGGTCGAG
TATACCTTCCAACATCTGGGAAGAATAATTGCTGATTCGCAACGGGGGAT
GCTGTGGAAACCTATGGTGAAGCTGATGGATAGGGCGAAGGATAGGCGGA
GGGAGCTGCTTTCCACATCTACTACTATTTCTTCCGGCACTGGCTCTGGT
CCTTCTTCATCCAACCTCAATCCTGGTTCGGCTATCAGCTCAGAGCAGTT
TTCTCCACTGGATTTATCTATCCAGCAACAGCAGAAGGAGCAGGAGCAGC
AACCGTCTATGGCTATGCAGATAGACACGCAAAACTTCATGCACACACCT
GAGAACAGTAGTCTTGATGGTGCGGCAGCGGCAGCGGCAGTCGCTGCGTC
TGCGTGGCCGAATGTCTGGGACGCGGTGGATTTCAGCTACACGGGTCCAG
GACTAGGAAGTATGCAGATGGCGTGGGCGAATTACGAGAACTTTGTTGCG
GATTTCTATGTGAATGTTGATGATCCGGAGATTAACCGGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_89060ATCC64974_89060Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_89060-T1.exon1ATCC64974_89060-T1.exon1Aspergillus niger N402exon
ATCC64974_89060-T1.exon2ATCC64974_89060-T1.exon2Aspergillus niger N402exon
ATCC64974_89060-T1.exon3ATCC64974_89060-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_89060-T1.cdsATCC64974_89060-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_89060-T1ATCC64974_89060-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:716154..718490 +
Powered by Drupal