You are here

Home

ATCC64974_89090-T1, ATCC64974_89090-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_89090-T1
Unique NameATCC64974_89090-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:734111..735834+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_89090-T1 ID=ATCC64974_89090-T1|Name=ATCC64974_89090-T1|organism=Aspergillus niger N402|type=mRNA|length=1724bp|location=Sequence derived from alignment at OGUI01000016.1:734111..735834+ (Aspergillus niger N402)
ATGCTTATCGATGGCGAGAAGTGGGCTTGTGAAGCTTGCGTCCGGGGTCA
CCGTGTCAGCAGCTGTCACCACAGTGGTAAGTGTGGCAACCATCTCTGAC
GCATCACATCTTTTTCCCGTCGCAATTGCTAACGTGGCTTGGCTGCAGAC
CGCCCCTTGACCCACATTAACAAAAAAGGCCGTCCTGTCTCCCAATGCGC
TCACTGTCGCGGCCTACGCAAGTCACGGACAACCCACACTAAGTGCGAGT
GCGGTGACAAGAAAAAGAATTGCCACAAGAATGACTCAGATCCCCATGCT
ACGGATAAGCGGGATCACAAGCGTGAGCATGATGGTGATGGTGAACTGGT
TCATAGTTTTCTGATCTGGATTTTACAGAGGACTCCCGTCCAAAATGTGG
CTGCACTCATGGTCAGCGCTGTACCTGTGCGCTGAAGAAGGAACCCCACC
TGGATACCGTTCCGGAGACCGGCCTCCCTCCACCCCCAGCTGCGACGCTG
TTGGATCAGCCCAAGAAGCCGCAGCTGACCTCGACCAAATCGGAGAGTAC
CTTGACCATCTTCCGCGATGGCCACCACAAGCCGGCTCATAAGCACAACG
ACATGGCTCACAAATGCGGTCTGCCCTATACGATACCCCGTTCTCATACC
ATCCATGCTGGCGATGTGGCCCGCCGCTCGGTCGACCACCTGCCTTTGGT
CCAGCCCACCATGCTCAACGAGGGTTTCGCGAATCAACAACAGCCCGCAG
AACAGTCACCTTCGCGCGGACAACATCGCCGTGTCAAGTCTGAACATGGT
TCTCCTGAGAGTGCCCCCGTCGTCTCGCCGGACAACGTCCCGACAACCGT
TCCCCCACTCGACATCTCGTCCTTTTTCCCTCAAGTTCAGACAGCGGAGA
ACGCTGGTGACGTTGGCGTTCCCGAGCCGGTCTCGATGCCTATGAAGACC
CCTCTGGACCCACTGGTCACGTCGGGGTTACCCTTCGACATGTCATCATT
CTCATCCTTCCCAACAACAGCGACATCGCCTGTCAATTGTGTCGCATTTC
AGGACCCCTACAAGGAGCCTTTCTTCACGTCACCGGAGGGCGACGTGTCT
CTTCAGTCGACCGCATTCAGCGCCCCTCCAGTCGATTGGTCAAGCTTCCC
TCTGTACTCCTCGGAAGTACCAGCCGCGACAAGCACTCAAGCACCTTCCT
ACGCAAGCTTCGATTACAACTCTATGGCACCCGGGTTCCCAGCCCCATCA
TCATCCGGTGACATCTCTGAAGCGGATGAGTTCGCGCCGATCCCTGGCTT
GGGACGTACTGGCAGCGATCTGCACGATCTCAACAGCGTTAGCGAGGGCT
CCGATATCGACCATTTCCGCATCAGCTCCGCGTCGTCCTTCATTGGCCTT
CCCCAGGCACAGCTCTTGGCATCGAATAACCTTGAGTCGATTGACATTGA
CGACTTCCTCAAGTCGGCCAACGAGTCCACCGCGGCGTTAGAGCATCAGC
TCCAGGCCACGATGGGCATGGAAGCCAAGCAACTTCCGACCGAGGACGCC
TTCGCCATGTCGAATGCTGAGACTTTCAAGCCGGTGACTACACCGACTGC
CAGCATGTCGATGACCACGCCTCCGACCGAAGCCGCTTGGAACGTGGGGC
TCTTCGACCCCAATACTGCCCCCATGAGCGAAAACAGCAATGGCAATTTC
TACGTGCTGCCATGGGTGCAGTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000016.1:734111..735834+

>ATCC64974_89090-T1 ID=ATCC64974_89090-T1|Name=ATCC64974_89090-T1|organism=Aspergillus niger N402|type=CDS|length=4788bp|location=Sequence derived from alignment at OGUI01000016.1:734111..735834+ (Aspergillus niger N402)
ATGCTTATCGATGGCGAGAAGTGGGCTTGTGAAGCTTGCGTCCGGGGTCA
CCGTGTCAGCAGCTGTCACCACAGTGACCGCCCCTTGACCCACATTAACA
AAAAAGGCCGTCCTGTCTCCCAATGCGCTCACTGTCGCGGCCTACGCAAG
TCACGGACAACCCACACTAAGTGCGAGTGCGGTGACAAGAAAAAGAATTG
CCACAAGAATGACTCAGATCCCCATGCTACGGATAAGCGGGATCACAAGC
AGGACTCCCGTCCAAAATGTGGCTGCACTCATGGTCAGCGCTGTACCTGT
GCGCTGAAGAAGGAACCCCACCTGGATACCGTTCCGGAGACCGGCCTCCC
TCCACCCCCAGCTGCGACGCTGTTGGATCAGCCCAAGAAGCCGCAGCTGA
CCTCGACCAAATCGGAGAGTACCTTGACCATCTTCCGCGATGGCCACCAC
AAGCCGGCTCATAAGCACAACGACATGGCTCACAAATGCGGTCTGCCCTA
TACGATACCCCGTTCTCATACCATCCATGCTGGCGATGTGGCCCGCCGCT
CGGTCGACCACCTGCCTTTGGTCCAGCCCACCATGCTCAACGAGGGTTTC
GCGAATCAACAACAGCCCGCAGAACAGTCACCTTCGCGCGGACAACATCG
CCGTGTCAAGTCTGAACATGGTTCTCCTGAGAGTGCCCCCGTCGTCTCGC
CGGACAACGTCCCGACAACCGTTCCCCCACTCGACATCTCGTCCTTTTTC
CCTCAAGTTCAGACAGCGGAGAACGCTGGTGACGTTGGCGTTCCCGAGCC
GGTCTCGATGCCTATGAAGACCCCTCTGGACCCACTGGTCACGTCGGGGT
TACCCTTCGACATGTCATCATTCTCATCCTTCCCAACAACAGCGACATCG
CCTGTCAATTGTGTCGCATTTCAGGACCCCTACAAGGAGCCTTTCTTCAC
GTCACCGGAGGGCGACGTGTCTCTTCAGTCGACCGCATTCAGCGCCCCTC
CAGTCGATTGGTCAAGCTTCCCTCTGTACTCCTCGGAAGTACCAGCCGCG
ACAAGCACTCAAGCACCTTCCTACGCAAGCTTCGATTACAACTCTATGGC
ACCCGGGTTCCCAGCCCCATCATCATCCGGTGACATCTCTGAAGCGGATG
AGTTCGCGCCGATCCCTGGCTTGGGACGTACTGGCAGCGATCTGCACGAT
CTCAACAGCGTTAGCGAGGGCTCCGATATCGACCATTTCCGCATCAGCTC
CGCGTCGTCCTTCATTGGCCTTCCCCAGGCACAGCTCTTGGCATCGAATA
ACCTTGAGTCGATTGACATTGACGACTTCCTCAAGTCGGCCAACGAGTCC
ACCGCGGCGTTAGAGCATCAGCTCCAGGCCACGATGGGCATGGAAGCCAA
GCAACTTCCGACCGAGGACGCCTTCGCCATGTCGAATGCTGAGACTTTCA
AGCCGGTGACTACACCGACTGCCAGCATGTCGATGACCACGCCTCCGACC
GAAGCCGCTTGGAACGTGGGGCTCTTCGACCCCAATACTGCCCCCATGAG
CGAAAACAGCAATGGCAATTTCTACGTGCTGCCATGGGTGCAGTAAATGC
TTATCGATGGCGAGAAGTGGGCTTGTGAAGCTTGCGTCCGGGGTCACCGT
GTCAGCAGCTGTCACCACAGTGACCGCCCCTTGACCCACATTAACAAAAA
AGGCCGTCCTGTCTCCCAATGCGCTCACTGTCGCGGCCTACGCAAGTCAC
GGACAACCCACACTAAGTGCGAGTGCGGTGACAAGAAAAAGAATTGCCAC
AAGAATGACTCAGATCCCCATGCTACGGATAAGCGGGATCACAAGCAGGA
CTCCCGTCCAAAATGTGGCTGCACTCATGGTCAGCGCTGTACCTGTGCGC
TGAAGAAGGAACCCCACCTGGATACCGTTCCGGAGACCGGCCTCCCTCCA
CCCCCAGCTGCGACGCTGTTGGATCAGCCCAAGAAGCCGCAGCTGACCTC
GACCAAATCGGAGAGTACCTTGACCATCTTCCGCGATGGCCACCACAAGC
CGGCTCATAAGCACAACGACATGGCTCACAAATGCGGTCTGCCCTATACG
ATACCCCGTTCTCATACCATCCATGCTGGCGATGTGGCCCGCCGCTCGGT
CGACCACCTGCCTTTGGTCCAGCCCACCATGCTCAACGAGGGTTTCGCGA
ATCAACAACAGCCCGCAGAACAGTCACCTTCGCGCGGACAACATCGCCGT
GTCAAGTCTGAACATGGTTCTCCTGAGAGTGCCCCCGTCGTCTCGCCGGA
CAACGTCCCGACAACCGTTCCCCCACTCGACATCTCGTCCTTTTTCCCTC
AAGTTCAGACAGCGGAGAACGCTGGTGACGTTGGCGTTCCCGAGCCGGTC
TCGATGCCTATGAAGACCCCTCTGGACCCACTGGTCACGTCGGGGTTACC
CTTCGACATGTCATCATTCTCATCCTTCCCAACAACAGCGACATCGCCTG
TCAATTGTGTCGCATTTCAGGACCCCTACAAGGAGCCTTTCTTCACGTCA
CCGGAGGGCGACGTGTCTCTTCAGTCGACCGCATTCAGCGCCCCTCCAGT
CGATTGGTCAAGCTTCCCTCTGTACTCCTCGGAAGTACCAGCCGCGACAA
GCACTCAAGCACCTTCCTACGCAAGCTTCGATTACAACTCTATGGCACCC
GGGTTCCCAGCCCCATCATCATCCGGTGACATCTCTGAAGCGGATGAGTT
CGCGCCGATCCCTGGCTTGGGACGTACTGGCAGCGATCTGCACGATCTCA
ACAGCGTTAGCGAGGGCTCCGATATCGACCATTTCCGCATCAGCTCCGCG
TCGTCCTTCATTGGCCTTCCCCAGGCACAGCTCTTGGCATCGAATAACCT
TGAGTCGATTGACATTGACGACTTCCTCAAGTCGGCCAACGAGTCCACCG
CGGCGTTAGAGCATCAGCTCCAGGCCACGATGGGCATGGAAGCCAAGCAA
CTTCCGACCGAGGACGCCTTCGCCATGTCGAATGCTGAGACTTTCAAGCC
GGTGACTACACCGACTGCCAGCATGTCGATGACCACGCCTCCGACCGAAG
CCGCTTGGAACGTGGGGCTCTTCGACCCCAATACTGCCCCCATGAGCGAA
AACAGCAATGGCAATTTCTACGTGCTGCCATGGGTGCAGTAAATGCTTAT
CGATGGCGAGAAGTGGGCTTGTGAAGCTTGCGTCCGGGGTCACCGTGTCA
GCAGCTGTCACCACAGTGACCGCCCCTTGACCCACATTAACAAAAAAGGC
CGTCCTGTCTCCCAATGCGCTCACTGTCGCGGCCTACGCAAGTCACGGAC
AACCCACACTAAGTGCGAGTGCGGTGACAAGAAAAAGAATTGCCACAAGA
ATGACTCAGATCCCCATGCTACGGATAAGCGGGATCACAAGCAGGACTCC
CGTCCAAAATGTGGCTGCACTCATGGTCAGCGCTGTACCTGTGCGCTGAA
GAAGGAACCCCACCTGGATACCGTTCCGGAGACCGGCCTCCCTCCACCCC
CAGCTGCGACGCTGTTGGATCAGCCCAAGAAGCCGCAGCTGACCTCGACC
AAATCGGAGAGTACCTTGACCATCTTCCGCGATGGCCACCACAAGCCGGC
TCATAAGCACAACGACATGGCTCACAAATGCGGTCTGCCCTATACGATAC
CCCGTTCTCATACCATCCATGCTGGCGATGTGGCCCGCCGCTCGGTCGAC
CACCTGCCTTTGGTCCAGCCCACCATGCTCAACGAGGGTTTCGCGAATCA
ACAACAGCCCGCAGAACAGTCACCTTCGCGCGGACAACATCGCCGTGTCA
AGTCTGAACATGGTTCTCCTGAGAGTGCCCCCGTCGTCTCGCCGGACAAC
GTCCCGACAACCGTTCCCCCACTCGACATCTCGTCCTTTTTCCCTCAAGT
TCAGACAGCGGAGAACGCTGGTGACGTTGGCGTTCCCGAGCCGGTCTCGA
TGCCTATGAAGACCCCTCTGGACCCACTGGTCACGTCGGGGTTACCCTTC
GACATGTCATCATTCTCATCCTTCCCAACAACAGCGACATCGCCTGTCAA
TTGTGTCGCATTTCAGGACCCCTACAAGGAGCCTTTCTTCACGTCACCGG
AGGGCGACGTGTCTCTTCAGTCGACCGCATTCAGCGCCCCTCCAGTCGAT
TGGTCAAGCTTCCCTCTGTACTCCTCGGAAGTACCAGCCGCGACAAGCAC
TCAAGCACCTTCCTACGCAAGCTTCGATTACAACTCTATGGCACCCGGGT
TCCCAGCCCCATCATCATCCGGTGACATCTCTGAAGCGGATGAGTTCGCG
CCGATCCCTGGCTTGGGACGTACTGGCAGCGATCTGCACGATCTCAACAG
CGTTAGCGAGGGCTCCGATATCGACCATTTCCGCATCAGCTCCGCGTCGT
CCTTCATTGGCCTTCCCCAGGCACAGCTCTTGGCATCGAATAACCTTGAG
TCGATTGACATTGACGACTTCCTCAAGTCGGCCAACGAGTCCACCGCGGC
GTTAGAGCATCAGCTCCAGGCCACGATGGGCATGGAAGCCAAGCAACTTC
CGACCGAGGACGCCTTCGCCATGTCGAATGCTGAGACTTTCAAGCCGGTG
ACTACACCGACTGCCAGCATGTCGATGACCACGCCTCCGACCGAAGCCGC
TTGGAACGTGGGGCTCTTCGACCCCAATACTGCCCCCATGAGCGAAAACA
GCAATGGCAATTTCTACGTGCTGCCATGGGTGCAGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700DNA-binding transcription factor activity
GO:0005507copper ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_89090ATCC64974_89090Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_89090-T1.exon1ATCC64974_89090-T1.exon1Aspergillus niger N402exon
ATCC64974_89090-T1.exon2ATCC64974_89090-T1.exon2Aspergillus niger N402exon
ATCC64974_89090-T1.exon3ATCC64974_89090-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_89090-T1.cdsATCC64974_89090-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_89090-T1ATCC64974_89090-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036395
DBxrefInterPro:IPR001083
DBxrefPFAM:PF00649
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:734111..735834 +
Powered by Drupal