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ATCC64974_8940-T1, ATCC64974_8940-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_8940-T1
Unique NameATCC64974_8940-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000002.1:465991..467265+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_8940-T1 ID=ATCC64974_8940-T1|Name=ATCC64974_8940-T1|organism=Aspergillus niger N402|type=mRNA|length=1275bp|location=Sequence derived from alignment at OGUI01000002.1:465991..467265+ (Aspergillus niger N402)
ATGCCAGCAATAAAACAATTCCCCACCCAACTGGCCCACACCCTCAGAAC
CCACAATGGTAAGCTAACTCTACGCCTTAAGCTCTAGAAGCTCTAGATCC
CCTCTGACGTACCTCAGGCCCCGTGAACGCAGTGACCTTCTCCAGCTATC
CTGGAACCTATGTCCTCACCGGCTCGACAGATCGCGCTATTCACCTCTCC
CGGGCTATTCCCAACAATAACAATGCTGCCGCCGCAGAGACGACGTCCCC
GATCCAGAAGTATGAAGCGCACGGGTACTCTGTGTTGGACATTGCCGTCG
CAGCAGACAACTCCCGGTTCGCCAGCGTTGGTGGAGACCGCCAGGTTTTT
CTGTGGGATGTCGAGCAAGGTGGAACAATCAGGCGCTGGAGTGGACATAA
TGCGCGTGTTGAGGCAGTCCAATTCGCAGGCGAGGACGACTCTGTAGTTG
TGTCTGGTAAATTCGTCCTGATTTATATGCACGCTTTGGTTATGATCACT
GACGGGTTTTGCGTACGGTTTAGGCAGTGCAGACACAACTATCAACATCT
GGGATACCAAGTCCAACTCCTACAAGCCAATTCAGACCCTCACCGAAGCC
CGAGATACTGTTTCTTCCTTGCACGTACATATGCCCACGTACTCTATCGC
AAGCGCGAGCTACGATGGTCGAGTCCGAGTGTACGATATCCGAATGGGGC
GCACCCTTGTTGATGTTCTCGCGCATCCTGTTACTAGTGTTCGCTGCTCC
AGTGACGGCAATGCTCTTCTAGCATCTACAACAGACGGGCGCATCCGAAT
GCTGGACCGGAGTGACGGCAAGCTATTAAAGGCGTTTGGCGGCGACGATG
CCAGTCCAATCCAAGGTAATAGCACTGCCATATATCGCAAAAGCGAACTT
CGAATTCGCTCTGTTTTCGCGAAAGCAGACGCCATTGTCCTCAGCGGGAG
TGAAGCAAATGACTCCGGCAATGGCAATGGTGCTACGCAGGCGTCCGTAT
TCGCCTGGGATGTGCTTAGTGGAGAAGTGGTCGCGTGTGTTCCAGCTGGA
CCAGGCGTCAAGGCCGTGAGTGCTGTATCGTGGAATGAAAAAGGAGGTTG
CTGGGCTGGTGGTTGTTCAGATGGTATGTCTCAGCTATGGCAGTTTCTAA
TTTCGTTTGTGCAACCCTCCCCTCCCCTGGTTACGTTTGGTGGCTATCTA
TCATACCTTGTTCTCGTTTTCAAACTCTGCACTGTACCTGTTTTCCTCAC
TGCGTGGCGCATTGCACGTGGCTAA
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Coding sequence (CDS) from alignment at OGUI01000002.1:465991..467265+

>ATCC64974_8940-T1 ID=ATCC64974_8940-T1|Name=ATCC64974_8940-T1|organism=Aspergillus niger N402|type=CDS|length=3447bp|location=Sequence derived from alignment at OGUI01000002.1:465991..467265+ (Aspergillus niger N402)
ATGCCAGCAATAAAACAATTCCCCACCCAACTGGCCCACACCCTCAGAAC
CCACAATGGCCCCGTGAACGCAGTGACCTTCTCCAGCTATCCTGGAACCT
ATGTCCTCACCGGCTCGACAGATCGCGCTATTCACCTCTCCCGGGCTATT
CCCAACAATAACAATGCTGCCGCCGCAGAGACGACGTCCCCGATCCAGAA
GTATGAAGCGCACGGGTACTCTGTGTTGGACATTGCCGTCGCAGCAGACA
ACTCCCGGTTCGCCAGCGTTGGTGGAGACCGCCAGGTTTTTCTGTGGGAT
GTCGAGCAAGGTGGAACAATCAGGCGCTGGAGTGGACATAATGCGCGTGT
TGAGGCAGTCCAATTCGCAGGCGAGGACGACTCTGTAGTTGTGTCTGGCA
GTGCAGACACAACTATCAACATCTGGGATACCAAGTCCAACTCCTACAAG
CCAATTCAGACCCTCACCGAAGCCCGAGATACTGTTTCTTCCTTGCACGT
ACATATGCCCACGTACTCTATCGCAAGCGCGAGCTACGATGGTCGAGTCC
GAGTGTACGATATCCGAATGGGGCGCACCCTTGTTGATGTTCTCGCGCAT
CCTGTTACTAGTGTTCGCTGCTCCAGTGACGGCAATGCTCTTCTAGCATC
TACAACAGACGGGCGCATCCGAATGCTGGACCGGAGTGACGGCAAGCTAT
TAAAGGCGTTTGGCGGCGACGATGCCAGTCCAATCCAAGGTAATAGCACT
GCCATATATCGCAAAAGCGAACTTCGAATTCGCTCTGTTTTCGCGAAAGC
AGACGCCATTGTCCTCAGCGGGAGTGAAGCAAATGACTCCGGCAATGGCA
ATGGTGCTACGCAGGCGTCCGTATTCGCCTGGGATGTGCTTAGTGGAGAA
GTGGTCGCGTGTGTTCCAGCTGGACCAGGCGTCAAGGCCGTGAGTGCTGT
ATCGTGGAATGAAAAAGGAGGTTGCTGGGCTGGTGGTTGTTCAGATGGTA
TGTCTCAGCTATGGCAGTTTCTAATTTCGTTTGTGCAACCCTCCCCTCCC
CTGGTTACGTTTGGTGGCTATCTATCATACCTTGTTCTCGTTTTCAAACT
CTGCACTGTACCTGTTTTCCTCACTGCGTGGCGCATTGCACGTGGCTAAA
TGCCAGCAATAAAACAATTCCCCACCCAACTGGCCCACACCCTCAGAACC
CACAATGGCCCCGTGAACGCAGTGACCTTCTCCAGCTATCCTGGAACCTA
TGTCCTCACCGGCTCGACAGATCGCGCTATTCACCTCTCCCGGGCTATTC
CCAACAATAACAATGCTGCCGCCGCAGAGACGACGTCCCCGATCCAGAAG
TATGAAGCGCACGGGTACTCTGTGTTGGACATTGCCGTCGCAGCAGACAA
CTCCCGGTTCGCCAGCGTTGGTGGAGACCGCCAGGTTTTTCTGTGGGATG
TCGAGCAAGGTGGAACAATCAGGCGCTGGAGTGGACATAATGCGCGTGTT
GAGGCAGTCCAATTCGCAGGCGAGGACGACTCTGTAGTTGTGTCTGGCAG
TGCAGACACAACTATCAACATCTGGGATACCAAGTCCAACTCCTACAAGC
CAATTCAGACCCTCACCGAAGCCCGAGATACTGTTTCTTCCTTGCACGTA
CATATGCCCACGTACTCTATCGCAAGCGCGAGCTACGATGGTCGAGTCCG
AGTGTACGATATCCGAATGGGGCGCACCCTTGTTGATGTTCTCGCGCATC
CTGTTACTAGTGTTCGCTGCTCCAGTGACGGCAATGCTCTTCTAGCATCT
ACAACAGACGGGCGCATCCGAATGCTGGACCGGAGTGACGGCAAGCTATT
AAAGGCGTTTGGCGGCGACGATGCCAGTCCAATCCAAGGTAATAGCACTG
CCATATATCGCAAAAGCGAACTTCGAATTCGCTCTGTTTTCGCGAAAGCA
GACGCCATTGTCCTCAGCGGGAGTGAAGCAAATGACTCCGGCAATGGCAA
TGGTGCTACGCAGGCGTCCGTATTCGCCTGGGATGTGCTTAGTGGAGAAG
TGGTCGCGTGTGTTCCAGCTGGACCAGGCGTCAAGGCCGTGAGTGCTGTA
TCGTGGAATGAAAAAGGAGGTTGCTGGGCTGGTGGTTGTTCAGATGGTAT
GTCTCAGCTATGGCAGTTTCTAATTTCGTTTGTGCAACCCTCCCCTCCCC
TGGTTACGTTTGGTGGCTATCTATCATACCTTGTTCTCGTTTTCAAACTC
TGCACTGTACCTGTTTTCCTCACTGCGTGGCGCATTGCACGTGGCTAAAT
GCCAGCAATAAAACAATTCCCCACCCAACTGGCCCACACCCTCAGAACCC
ACAATGGCCCCGTGAACGCAGTGACCTTCTCCAGCTATCCTGGAACCTAT
GTCCTCACCGGCTCGACAGATCGCGCTATTCACCTCTCCCGGGCTATTCC
CAACAATAACAATGCTGCCGCCGCAGAGACGACGTCCCCGATCCAGAAGT
ATGAAGCGCACGGGTACTCTGTGTTGGACATTGCCGTCGCAGCAGACAAC
TCCCGGTTCGCCAGCGTTGGTGGAGACCGCCAGGTTTTTCTGTGGGATGT
CGAGCAAGGTGGAACAATCAGGCGCTGGAGTGGACATAATGCGCGTGTTG
AGGCAGTCCAATTCGCAGGCGAGGACGACTCTGTAGTTGTGTCTGGCAGT
GCAGACACAACTATCAACATCTGGGATACCAAGTCCAACTCCTACAAGCC
AATTCAGACCCTCACCGAAGCCCGAGATACTGTTTCTTCCTTGCACGTAC
ATATGCCCACGTACTCTATCGCAAGCGCGAGCTACGATGGTCGAGTCCGA
GTGTACGATATCCGAATGGGGCGCACCCTTGTTGATGTTCTCGCGCATCC
TGTTACTAGTGTTCGCTGCTCCAGTGACGGCAATGCTCTTCTAGCATCTA
CAACAGACGGGCGCATCCGAATGCTGGACCGGAGTGACGGCAAGCTATTA
AAGGCGTTTGGCGGCGACGATGCCAGTCCAATCCAAGGTAATAGCACTGC
CATATATCGCAAAAGCGAACTTCGAATTCGCTCTGTTTTCGCGAAAGCAG
ACGCCATTGTCCTCAGCGGGAGTGAAGCAAATGACTCCGGCAATGGCAAT
GGTGCTACGCAGGCGTCCGTATTCGCCTGGGATGTGCTTAGTGGAGAAGT
GGTCGCGTGTGTTCCAGCTGGACCAGGCGTCAAGGCCGTGAGTGCTGTAT
CGTGGAATGAAAAAGGAGGTTGCTGGGCTGGTGGTTGTTCAGATGGTATG
TCTCAGCTATGGCAGTTTCTAATTTCGTTTGTGCAACCCTCCCCTCCCCT
GGTTACGTTTGGTGGCTATCTATCATACCTTGTTCTCGTTTTCAAACTCT
GCACTGTACCTGTTTTCCTCACTGCGTGGCGCATTGCACGTGGCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_8940ATCC64974_8940Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_8940-T1.exon1ATCC64974_8940-T1.exon1Aspergillus niger N402exon
ATCC64974_8940-T1.exon2ATCC64974_8940-T1.exon2Aspergillus niger N402exon
ATCC64974_8940-T1.exon3ATCC64974_8940-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_8940-T1.cdsATCC64974_8940-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_8940-T1ATCC64974_8940-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000002.1supercontigOGUI01000002.1:465991..467265 +
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