ATCC64974_89470-T1, ATCC64974_89470-T1 (mRNA) Aspergillus niger N402

Overview


Name	ATCC64974_89470-T1
Unique Name	ATCC64974_89470-T1
Type	mRNA
Organism	Aspergillus niger N402

Sequences

The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:855611..857231-
coding sequence from alignment at OGUI01000016.1:855611..857231-

mRNA from alignment at OGUI01000016.1:855611..857231-

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>ATCC64974_89470-T1 ID=ATCC64974_89470-T1|Name=ATCC64974_89470-T1|organism=Aspergillus niger N402|type=mRNA|length=1621bp|location=Sequence derived from alignment at OGUI01000016.1:855611..857231- (Aspergillus niger N402)
ATGGGGAGACCCCAGTTGTTGAGAGACATAGATAATACTATCCTCACGGA
TTCCTTATTTGACGCATATTTTATGTCGTATAACAAGTCATTTCCCATCC
TACATGAAAAGACGTTCAGAGAGAAGTACCAGAATCGGCATCATATCCCA
GCTCACTCCACATGGCACTTGATATTCTACATCGTTCTGGCGATCGGTGA
CTGGGTCGTATCCGGTGGCTCCAAAGTCGAGGAGTCGAGATATTACATGG
CTGCACGGTCGTCCATGTCAATGAGTCTGCTGGAGTCAGGTGCACTTCTC
ACGGTTCAAGCTTTTCTTCTGATGGTGAGTTGACGTGATGCATATCTTGT
GCGTATCGCGAGCAAATACTAAGTGACGAAGGGAAACTTTCTCCAGAAAC
GGGATCGACCAAATACCGGATACAACTTCATTGGAATAGCATATCGAATG
GCCCTTGGACTGGGCCTCCATCGTGAACCAGTAAGGGAGTCGACGCTCGA
CACCTTGGCTACCGAAAGAAGAAGAGTCGTGTGGTGGATTGTTTATTCAT
TTGACAGCGGATTCAGTCTGACCACAGGAAGGCCATTGATGTCATCGGAT
TGTTTCATCGAAACCCAGCTTCCACGCAACATCGAAGACTCGGTACGTAA
TGAAAAATATGAATATGGGCGAGAGGAGACGTTCGCTAACTTGTCACCAT
CAGGCTTCCACATTAGATTCCACAGTCCCAGACCCCATCGACAAACCGAC
CACATACTCTGCGATCATAGCACAGGCCCGATTATCACGCATTGGAAACA
TGATATACTGTAACGTGATAGCAGGTCCGAAAAGGGACATTGATTTAAAG
ACTCCACGATCTCTCGATCACCAGCTCAAGACCTGGAGACTCTCACTGCC
CCACTACTTCACGGCCCACGATGTCCCGACATGGTTCCGTGGACCTCGAG
CAATAGTAAGTTGGAAGGAACAGAACCTGCGAATGATGCTGTGGTGGGGG
ACTCAACGCCTGTGCGGTTCACTGCAAGACAGCGAAGAAGCCCGCAATAT
GTGTCACTATGCTGCCGTAGAGTGTATCCAGGATATCACTACCTTTTGTA
TTGACTATCCGGATACACTCCACGTCGGCCTATGCTGGTACGCGACATAC
TTCCTCTTCCAGGCATCCATCGTGCTCAGTATCTATCATCTCCGACCAAA
GGAGCCATTGGATCGAGGTTTGGCAGTGGCAAACCAGCAGCTCTGGATAT
CGTCCATCGAGAGATCGCGTGACTGTCTGGCTAATTTGAGCCGGAAGAAC
CAGGCTGCAACGCGGTGCTTGGAAGTTCTTGATCGGATTATGTATCAGTC
GCAATCTACGCCTCCTGCGGTTGGGGAGGTTTCCTCGACGACGAATGTCC
CGGGCACGACACAATTGCCAGTGGATTATGATAATGCAGGCACGCGTCTC
GATACACTTGCCGTTGACCCTTCTCTTCAAATGCTTTTTGATGCGACGTC
GTTTGATATGGATATCTTTGAAGGACTTGAAGGGTTTCCGAATACGAATG
AAGTAGAATCATTCGATTATGTTTCAGGAGCTGCGTTGGTCACTGACAAT
GCAGAGGACTGGCAAATTTGA

Coding sequence (CDS) from alignment at OGUI01000016.1:855611..857231-

>ATCC64974_89470-T1 ID=ATCC64974_89470-T1|Name=ATCC64974_89470-T1|organism=Aspergillus niger N402|type=CDS|length=4509bp|location=Sequence derived from alignment at OGUI01000016.1:855611..857231- (Aspergillus niger N402)
GCTTCCACATTAGATTCCACAGTCCCAGACCCCATCGACAAACCGACCAC
ATACTCTGCGATCATAGCACAGGCCCGATTATCACGCATTGGAAACATGA
TATACTGTAACGTGATAGCAGGTCCGAAAAGGGACATTGATTTAAAGACT
CCACGATCTCTCGATCACCAGCTCAAGACCTGGAGACTCTCACTGCCCCA
CTACTTCACGGCCCACGATGTCCCGACATGGTTCCGTGGACCTCGAGCAA
TAGTAAGTTGGAAGGAACAGAACCTGCGAATGATGCTGTGGTGGGGGACT
CAACGCCTGTGCGGTTCACTGCAAGACAGCGAAGAAGCCCGCAATATGTG
TCACTATGCTGCCGTAGAGTGTATCCAGGATATCACTACCTTTTGTATTG
ACTATCCGGATACACTCCACGTCGGCCTATGCTGGTACGCGACATACTTC
CTCTTCCAGGCATCCATCGTGCTCAGTATCTATCATCTCCGACCAAAGGA
GCCATTGGATCGAGGTTTGGCAGTGGCAAACCAGCAGCTCTGGATATCGT
CCATCGAGAGATCGCGTGACTGTCTGGCTAATTTGAGCCGGAAGAACCAG
GCTGCAACGCGGTGCTTGGAAGTTCTTGATCGGATTATGTATCAGTCGCA
ATCTACGCCTCCTGCGGTTGGGGAGGTTTCCTCGACGACGAATGTCCCGG
GCACGACACAATTGCCAGTGGATTATGATAATGCAGGCACGCGTCTCGAT
ACACTTGCCGTTGACCCTTCTCTTCAAATGCTTTTTGATGCGACGTCGTT
TGATATGGATATCTTTGAAGGACTTGAAGGGTTTCCGAATACGAATGAAG
TAGAATCATTCGATTATGTTTCAGGAGCTGCGTTGGTCACTGACAATGCA
GAGGACTGGCAAATTTGAGGAAACTTTCTCCAGAAACGGGATCGACCAAA
TACCGGATACAACTTCATTGGAATAGCATATCGAATGGCCCTTGGACTGG
GCCTCCATCGTGAACCAGTAAGGGAGTCGACGCTCGACACCTTGGCTACC
GAAAGAAGAAGAGTCGTGTGGTGGATTGTTTATTCATTTGACAGCGGATT
CAGTCTGACCACAGGAAGGCCATTGATGTCATCGGATTGTTTCATCGAAA
CCCAGCTTCCACGCAACATCGAAGACTCGATGGGGAGACCCCAGTTGTTG
AGAGACATAGATAATACTATCCTCACGGATTCCTTATTTGACGCATATTT
TATGTCGTATAACAAGTCATTTCCCATCCTACATGAAAAGACGTTCAGAG
AGAAGTACCAGAATCGGCATCATATCCCAGCTCACTCCACATGGCACTTG
ATATTCTACATCGTTCTGGCGATCGGTGACTGGGTCGTATCCGGTGGCTC
CAAAGTCGAGGAGTCGAGATATTACATGGCTGCACGGTCGTCCATGTCAA
TGAGTCTGCTGGAGTCAGGTGCACTTCTCACGGTTCAAGCTTTTCTTCTG
ATGGCTTCCACATTAGATTCCACAGTCCCAGACCCCATCGACAAACCGAC
CACATACTCTGCGATCATAGCACAGGCCCGATTATCACGCATTGGAAACA
TGATATACTGTAACGTGATAGCAGGTCCGAAAAGGGACATTGATTTAAAG
ACTCCACGATCTCTCGATCACCAGCTCAAGACCTGGAGACTCTCACTGCC
CCACTACTTCACGGCCCACGATGTCCCGACATGGTTCCGTGGACCTCGAG
CAATAGTAAGTTGGAAGGAACAGAACCTGCGAATGATGCTGTGGTGGGGG
ACTCAACGCCTGTGCGGTTCACTGCAAGACAGCGAAGAAGCCCGCAATAT
GTGTCACTATGCTGCCGTAGAGTGTATCCAGGATATCACTACCTTTTGTA
TTGACTATCCGGATACACTCCACGTCGGCCTATGCTGGTACGCGACATAC
TTCCTCTTCCAGGCATCCATCGTGCTCAGTATCTATCATCTCCGACCAAA
GGAGCCATTGGATCGAGGTTTGGCAGTGGCAAACCAGCAGCTCTGGATAT
CGTCCATCGAGAGATCGCGTGACTGTCTGGCTAATTTGAGCCGGAAGAAC
CAGGCTGCAACGCGGTGCTTGGAAGTTCTTGATCGGATTATGTATCAGTC
GCAATCTACGCCTCCTGCGGTTGGGGAGGTTTCCTCGACGACGAATGTCC
CGGGCACGACACAATTGCCAGTGGATTATGATAATGCAGGCACGCGTCTC
GATACACTTGCCGTTGACCCTTCTCTTCAAATGCTTTTTGATGCGACGTC
GTTTGATATGGATATCTTTGAAGGACTTGAAGGGTTTCCGAATACGAATG
AAGTAGAATCATTCGATTATGTTTCAGGAGCTGCGTTGGTCACTGACAAT
GCAGAGGACTGGCAAATTTGAGGAAACTTTCTCCAGAAACGGGATCGACC
AAATACCGGATACAACTTCATTGGAATAGCATATCGAATGGCCCTTGGAC
TGGGCCTCCATCGTGAACCAGTAAGGGAGTCGACGCTCGACACCTTGGCT
ACCGAAAGAAGAAGAGTCGTGTGGTGGATTGTTTATTCATTTGACAGCGG
ATTCAGTCTGACCACAGGAAGGCCATTGATGTCATCGGATTGTTTCATCG
AAACCCAGCTTCCACGCAACATCGAAGACTCGATGGGGAGACCCCAGTTG
TTGAGAGACATAGATAATACTATCCTCACGGATTCCTTATTTGACGCATA
TTTTATGTCGTATAACAAGTCATTTCCCATCCTACATGAAAAGACGTTCA
GAGAGAAGTACCAGAATCGGCATCATATCCCAGCTCACTCCACATGGCAC
TTGATATTCTACATCGTTCTGGCGATCGGTGACTGGGTCGTATCCGGTGG
CTCCAAAGTCGAGGAGTCGAGATATTACATGGCTGCACGGTCGTCCATGT
CAATGAGTCTGCTGGAGTCAGGTGCACTTCTCACGGTTCAAGCTTTTCTT
CTGATGGCTTCCACATTAGATTCCACAGTCCCAGACCCCATCGACAAACC
GACCACATACTCTGCGATCATAGCACAGGCCCGATTATCACGCATTGGAA
ACATGATATACTGTAACGTGATAGCAGGTCCGAAAAGGGACATTGATTTA
AAGACTCCACGATCTCTCGATCACCAGCTCAAGACCTGGAGACTCTCACT
GCCCCACTACTTCACGGCCCACGATGTCCCGACATGGTTCCGTGGACCTC
GAGCAATAGTAAGTTGGAAGGAACAGAACCTGCGAATGATGCTGTGGTGG
GGGACTCAACGCCTGTGCGGTTCACTGCAAGACAGCGAAGAAGCCCGCAA
TATGTGTCACTATGCTGCCGTAGAGTGTATCCAGGATATCACTACCTTTT
GTATTGACTATCCGGATACACTCCACGTCGGCCTATGCTGGTACGCGACA
TACTTCCTCTTCCAGGCATCCATCGTGCTCAGTATCTATCATCTCCGACC
AAAGGAGCCATTGGATCGAGGTTTGGCAGTGGCAAACCAGCAGCTCTGGA
TATCGTCCATCGAGAGATCGCGTGACTGTCTGGCTAATTTGAGCCGGAAG
AACCAGGCTGCAACGCGGTGCTTGGAAGTTCTTGATCGGATTATGTATCA
GTCGCAATCTACGCCTCCTGCGGTTGGGGAGGTTTCCTCGACGACGAATG
TCCCGGGCACGACACAATTGCCAGTGGATTATGATAATGCAGGCACGCGT
CTCGATACACTTGCCGTTGACCCTTCTCTTCAAATGCTTTTTGATGCGAC
GTCGTTTGATATGGATATCTTTGAAGGACTTGAAGGGTTTCCGAATACGA
ATGAAGTAGAATCATTCGATTATGTTTCAGGAGCTGCGTTGGTCACTGAC
AATGCAGAGGACTGGCAAATTTGAGGAAACTTTCTCCAGAAACGGGATCG
ACCAAATACCGGATACAACTTCATTGGAATAGCATATCGAATGGCCCTTG
GACTGGGCCTCCATCGTGAACCAGTAAGGGAGTCGACGCTCGACACCTTG
GCTACCGAAAGAAGAAGAGTCGTGTGGTGGATTGTTTATTCATTTGACAG
CGGATTCAGTCTGACCACAGGAAGGCCATTGATGTCATCGGATTGTTTCA
TCGAAACCCAGCTTCCACGCAACATCGAAGACTCGATGGGGAGACCCCAG
TTGTTGAGAGACATAGATAATACTATCCTCACGGATTCCTTATTTGACGC
ATATTTTATGTCGTATAACAAGTCATTTCCCATCCTACATGAAAAGACGT
TCAGAGAGAAGTACCAGAATCGGCATCATATCCCAGCTCACTCCACATGG
CACTTGATATTCTACATCGTTCTGGCGATCGGTGACTGGGTCGTATCCGG
TGGCTCCAAAGTCGAGGAGTCGAGATATTACATGGCTGCACGGTCGTCCA
TGTCAATGAGTCTGCTGGAGTCAGGTGCACTTCTCACGGTTCAAGCTTTT
CTTCTGATG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006351	transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0003677	DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
ATCC64974_89470	ATCC64974_89470	Aspergillus niger N402	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
ATCC64974_89470-T1	ATCC64974_89470-T1-protein	Aspergillus niger N402	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
ATCC64974_89470-T1.cds	ATCC64974_89470-T1.cds	Aspergillus niger N402	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
ATCC64974_89470-T1.exon3	ATCC64974_89470-T1.exon3	Aspergillus niger N402	exon
ATCC64974_89470-T1.exon2	ATCC64974_89470-T1.exon2	Aspergillus niger N402	exon
ATCC64974_89470-T1.exon1	ATCC64974_89470-T1.exon1	Aspergillus niger N402	exon

Properties


Property Name	Value
DBxref	InterPro:IPR007219
DBxref	PFAM:PF04082
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger N402 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
OGUI01000016.1	supercontig	OGUI01000016.1:855611..857231 -

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ATCC64974_89470-T1, ATCC64974_89470-T1 (mRNA) Aspergillus niger N402

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ATCC64974_89470-T1, ATCC64974_89470-T1 (mRNA) Aspergillus niger N402