You are here

Home

ATCC64974_89500-T1, ATCC64974_89500-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_89500-T1
Unique NameATCC64974_89500-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:863358..864409+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_89500-T1 ID=ATCC64974_89500-T1|Name=ATCC64974_89500-T1|organism=Aspergillus niger N402|type=mRNA|length=1052bp|location=Sequence derived from alignment at OGUI01000016.1:863358..864409+ (Aspergillus niger N402)
ATGTCTATGAACGTAGCCGAGTGTGCCCCAATCCGTGAGGGATTTCCTCG
CCCGTTCCCAAATACGCCAACAAATGTATTGGCGCAGATGCGTCTGAGCG
GAAAGGTTGTCGTTATCACAGGAGCTGCAGATGGTATCGGCTACGCAGTG
GCTGAAGCCATGGCTGAGGCTAATGCCGATATTGCCATGTGGTACAACTC
GTAAGCCATGCCATTCTTCCATCGGAAAAAAAGATTCCACATCTAACGAA
GCCACGATAGCAATGATGCAGCCGTCGGGAAAGCGCAGGGTCTGGCATCT
ACTCATGGGATCAGAGCTACGGCTTACAAGGTCGACGGTGGGGAGCACTT
GTCGTTCGTCATGAATAACGTGAAATGCTAATTAGCCCAGTTTCGGATGC
GGATGCCGTTCAGCAAGCAATTGCAGATGTCGCCAAAGACTTTGGCAAGA
TTGACGTGTTTATTGCAAATGCTGGTACAAACGGACTTGACACCGAAGAG
ATTATCTAAGTCACTAATAACGTACATAGGAATGGCTATTTCTAAGCCCC
TCCTGGAGCAGACACTGGAAGAATATCGGAAGCAGATGTCGGTCAATGGT
AAGGTGTGCTTCCTTCTTGGCAGTAGACTAGGTGCTGATGATGGTGTACA
GTTGATGGCGTTCTCTACTGCGCCAAATATGTTGGAGAGGTGTTCAAACA
ACAAGGCTTTGGTAATCTGATCATCACCTCTAGCATGAGTGGTCACATTG
TTAATGTGCCCGTTGATCAACCCGTCTACAATGGCAGCAAGGCCTTCGTC
ACGCACCTTGGGAAATCGCTTGCTCGTGAGTGGAGAGAGTTCGCCCGCGT
TAACATTGTCTCTCCTGGCTTTTTCGATACCAAGATGGGTGCCAGTCCGC
AGACGGTCAACGAGGCCTATCGGATGGCGCCGCTGGGAAGGCAGGGCCAT
GTAAAGGAAATTAAGGGGTTGTATCTGTATCTTGCCAGTGATGCGTCGAC
ATACATGACTGGTAGTGATGTCCTCATTGACGGAGGATACGTGCTACCAT
GA
back to top

Coding sequence (CDS) from alignment at OGUI01000016.1:863358..864409+

>ATCC64974_89500-T1 ID=ATCC64974_89500-T1|Name=ATCC64974_89500-T1|organism=Aspergillus niger N402|type=CDS|length=4155bp|location=Sequence derived from alignment at OGUI01000016.1:863358..864409+ (Aspergillus niger N402)
ATGTCTATGAACGTAGCCGAGTGTGCCCCAATCCGTGAGGGATTTCCTCG
CCCGTTCCCAAATACGCCAACAAATGTATTGGCGCAGATGCGTCTGAGCG
GAAAGGTTGTCGTTATCACAGGAGCTGCAGATGGTATCGGCTACGCAGTG
GCTGAAGCCATGGCTGAGGCTAATGCCGATATTGCCATGTGGTACAACTC
CAATGATGCAGCCGTCGGGAAAGCGCAGGGTCTGGCATCTACTCATGGGA
TCAGAGCTACGGCTTACAAGGTCGACGTTTCGGATGCGGATGCCGTTCAG
CAAGCAATTGCAGATGTCGCCAAAGACTTTGGCAAGATTGACGTGTTTAT
TGCAAATGCTGGAATGGCTATTTCTAAGCCCCTCCTGGAGCAGACACTGG
AAGAATATCGGAAGCAGATGTCGGTCAATGTTGATGGCGTTCTCTACTGC
GCCAAATATGTTGGAGAGGTGTTCAAACAACAAGGCTTTGGTAATCTGAT
CATCACCTCTAGCATGAGTGGTCACATTGTTAATGTGCCCGTTGATCAAC
CCGTCTACAATGGCAGCAAGGCCTTCGTCACGCACCTTGGGAAATCGCTT
GCTCGTGAGTGGAGAGAGTTCGCCCGCGTTAACATTGTCTCTCCTGGCTT
TTTCGATACCAAGATGGGTGCCAGTCCGCAGACGGTCAACGAGGCCTATC
GGATGGCGCCGCTGGGAAGGCAGGGCCATGTAAAGGAAATTAAGGGGTTG
TATCTGTATCTTGCCAGTGATGCGTCGACATACATGACTGGTAGTGATGT
CCTCATTGACGGAGGATACGTGCTACCATGAATGTCTATGAACGTAGCCG
AGTGTGCCCCAATCCGTGAGGGATTTCCTCGCCCGTTCCCAAATACGCCA
ACAAATGTATTGGCGCAGATGCGTCTGAGCGGAAAGGTTGTCGTTATCAC
AGGAGCTGCAGATGGTATCGGCTACGCAGTGGCTGAAGCCATGGCTGAGG
CTAATGCCGATATTGCCATGTGGTACAACTCCAATGATGCAGCCGTCGGG
AAAGCGCAGGGTCTGGCATCTACTCATGGGATCAGAGCTACGGCTTACAA
GGTCGACGTTTCGGATGCGGATGCCGTTCAGCAAGCAATTGCAGATGTCG
CCAAAGACTTTGGCAAGATTGACGTGTTTATTGCAAATGCTGGAATGGCT
ATTTCTAAGCCCCTCCTGGAGCAGACACTGGAAGAATATCGGAAGCAGAT
GTCGGTCAATGTTGATGGCGTTCTCTACTGCGCCAAATATGTTGGAGAGG
TGTTCAAACAACAAGGCTTTGGTAATCTGATCATCACCTCTAGCATGAGT
GGTCACATTGTTAATGTGCCCGTTGATCAACCCGTCTACAATGGCAGCAA
GGCCTTCGTCACGCACCTTGGGAAATCGCTTGCTCGTGAGTGGAGAGAGT
TCGCCCGCGTTAACATTGTCTCTCCTGGCTTTTTCGATACCAAGATGGGT
GCCAGTCCGCAGACGGTCAACGAGGCCTATCGGATGGCGCCGCTGGGAAG
GCAGGGCCATGTAAAGGAAATTAAGGGGTTGTATCTGTATCTTGCCAGTG
ATGCGTCGACATACATGACTGGTAGTGATGTCCTCATTGACGGAGGATAC
GTGCTACCATGAATGTCTATGAACGTAGCCGAGTGTGCCCCAATCCGTGA
GGGATTTCCTCGCCCGTTCCCAAATACGCCAACAAATGTATTGGCGCAGA
TGCGTCTGAGCGGAAAGGTTGTCGTTATCACAGGAGCTGCAGATGGTATC
GGCTACGCAGTGGCTGAAGCCATGGCTGAGGCTAATGCCGATATTGCCAT
GTGGTACAACTCCAATGATGCAGCCGTCGGGAAAGCGCAGGGTCTGGCAT
CTACTCATGGGATCAGAGCTACGGCTTACAAGGTCGACGTTTCGGATGCG
GATGCCGTTCAGCAAGCAATTGCAGATGTCGCCAAAGACTTTGGCAAGAT
TGACGTGTTTATTGCAAATGCTGGAATGGCTATTTCTAAGCCCCTCCTGG
AGCAGACACTGGAAGAATATCGGAAGCAGATGTCGGTCAATGTTGATGGC
GTTCTCTACTGCGCCAAATATGTTGGAGAGGTGTTCAAACAACAAGGCTT
TGGTAATCTGATCATCACCTCTAGCATGAGTGGTCACATTGTTAATGTGC
CCGTTGATCAACCCGTCTACAATGGCAGCAAGGCCTTCGTCACGCACCTT
GGGAAATCGCTTGCTCGTGAGTGGAGAGAGTTCGCCCGCGTTAACATTGT
CTCTCCTGGCTTTTTCGATACCAAGATGGGTGCCAGTCCGCAGACGGTCA
ACGAGGCCTATCGGATGGCGCCGCTGGGAAGGCAGGGCCATGTAAAGGAA
ATTAAGGGGTTGTATCTGTATCTTGCCAGTGATGCGTCGACATACATGAC
TGGTAGTGATGTCCTCATTGACGGAGGATACGTGCTACCATGAATGTCTA
TGAACGTAGCCGAGTGTGCCCCAATCCGTGAGGGATTTCCTCGCCCGTTC
CCAAATACGCCAACAAATGTATTGGCGCAGATGCGTCTGAGCGGAAAGGT
TGTCGTTATCACAGGAGCTGCAGATGGTATCGGCTACGCAGTGGCTGAAG
CCATGGCTGAGGCTAATGCCGATATTGCCATGTGGTACAACTCCAATGAT
GCAGCCGTCGGGAAAGCGCAGGGTCTGGCATCTACTCATGGGATCAGAGC
TACGGCTTACAAGGTCGACGTTTCGGATGCGGATGCCGTTCAGCAAGCAA
TTGCAGATGTCGCCAAAGACTTTGGCAAGATTGACGTGTTTATTGCAAAT
GCTGGAATGGCTATTTCTAAGCCCCTCCTGGAGCAGACACTGGAAGAATA
TCGGAAGCAGATGTCGGTCAATGTTGATGGCGTTCTCTACTGCGCCAAAT
ATGTTGGAGAGGTGTTCAAACAACAAGGCTTTGGTAATCTGATCATCACC
TCTAGCATGAGTGGTCACATTGTTAATGTGCCCGTTGATCAACCCGTCTA
CAATGGCAGCAAGGCCTTCGTCACGCACCTTGGGAAATCGCTTGCTCGTG
AGTGGAGAGAGTTCGCCCGCGTTAACATTGTCTCTCCTGGCTTTTTCGAT
ACCAAGATGGGTGCCAGTCCGCAGACGGTCAACGAGGCCTATCGGATGGC
GCCGCTGGGAAGGCAGGGCCATGTAAAGGAAATTAAGGGGTTGTATCTGT
ATCTTGCCAGTGATGCGTCGACATACATGACTGGTAGTGATGTCCTCATT
GACGGAGGATACGTGCTACCATGAATGTCTATGAACGTAGCCGAGTGTGC
CCCAATCCGTGAGGGATTTCCTCGCCCGTTCCCAAATACGCCAACAAATG
TATTGGCGCAGATGCGTCTGAGCGGAAAGGTTGTCGTTATCACAGGAGCT
GCAGATGGTATCGGCTACGCAGTGGCTGAAGCCATGGCTGAGGCTAATGC
CGATATTGCCATGTGGTACAACTCCAATGATGCAGCCGTCGGGAAAGCGC
AGGGTCTGGCATCTACTCATGGGATCAGAGCTACGGCTTACAAGGTCGAC
GTTTCGGATGCGGATGCCGTTCAGCAAGCAATTGCAGATGTCGCCAAAGA
CTTTGGCAAGATTGACGTGTTTATTGCAAATGCTGGAATGGCTATTTCTA
AGCCCCTCCTGGAGCAGACACTGGAAGAATATCGGAAGCAGATGTCGGTC
AATGTTGATGGCGTTCTCTACTGCGCCAAATATGTTGGAGAGGTGTTCAA
ACAACAAGGCTTTGGTAATCTGATCATCACCTCTAGCATGAGTGGTCACA
TTGTTAATGTGCCCGTTGATCAACCCGTCTACAATGGCAGCAAGGCCTTC
GTCACGCACCTTGGGAAATCGCTTGCTCGTGAGTGGAGAGAGTTCGCCCG
CGTTAACATTGTCTCTCCTGGCTTTTTCGATACCAAGATGGGTGCCAGTC
CGCAGACGGTCAACGAGGCCTATCGGATGGCGCCGCTGGGAAGGCAGGGC
CATGTAAAGGAAATTAAGGGGTTGTATCTGTATCTTGCCAGTGATGCGTC
GACATACATGACTGGTAGTGATGTCCTCATTGACGGAGGATACGTGCTAC
CATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_89500ATCC64974_89500Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_89500-T1ATCC64974_89500-T1-proteinAspergillus niger N402polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_89500-T1.exon1ATCC64974_89500-T1.exon1Aspergillus niger N402exon
ATCC64974_89500-T1.exon2ATCC64974_89500-T1.exon2Aspergillus niger N402exon
ATCC64974_89500-T1.exon3ATCC64974_89500-T1.exon3Aspergillus niger N402exon
ATCC64974_89500-T1.exon4ATCC64974_89500-T1.exon4Aspergillus niger N402exon
ATCC64974_89500-T1.exon5ATCC64974_89500-T1.exon5Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_89500-T1.cdsATCC64974_89500-T1.cdsAspergillus niger N402CDS


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:863358..864409 +
Powered by Drupal