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ATCC64974_8960-T1, ATCC64974_8960-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_8960-T1
Unique NameATCC64974_8960-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000002.1:474068..475979-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_8960-T1 ID=ATCC64974_8960-T1|Name=ATCC64974_8960-T1|organism=Aspergillus niger N402|type=mRNA|length=1912bp|location=Sequence derived from alignment at OGUI01000002.1:474068..475979- (Aspergillus niger N402)
ATGGCATCCATAGCGGAGGGCCTATTCAAGTCTCTTCCCAAGCCGAAATA
CACCGGCGAGGAGGAAGAGCTACCACAACATGCACAACCCCGAGGTCCGC
GGGTCGTAGGCCCGGGACAACTCGACGAAACACAGATTGTTCTCCGGGTT
GGTAGCACCGCATCCATACATAATCCACAGAAATCTTAGCCCCCCTTTAC
CGTTTCAACTCAATGCCAATAATGCTAACGATGACTACGACGAATACAGA
GAACCGGGCCCCCTCCCTACCAGAACCGAGCCGGATGGCGGCCCCGCGCC
CCCGAAGACTTCGGCGATGGCGGCGCGTTCCCCGAGATTCTAGTCGCGCA
GTACCCGCTCGATATGGGCCGGAAGGGCACATCATCGACATCGAACGCCC
TAGCCGTGCAAGTCGACGCCGAGGGAAAAGTCAAATACGATGCTATCGCG
CGCCGCGGACACAGCGACAACCGGATCGTGCATGCCTCCTTTAAGGATCT
GATTCCGCTGCGCCAGCGCGTCGATATGGGCGAGGTGTCATTGGACCGGC
CGTCGGAGGAAGAAGTCCAGGCGCAGATGGAGAAGACAAAGAACGCGCTC
GCCAGCTTAGTGGAGGGTGCGGCGGCGGCGCAGAAGCCTAAGAATGTGAA
GGGCGGGCGGCGAGCGGAACCTACGTTTGTGAGGTATACGCCGGCTAATC
AGATGGGTGATACGTCGAAGAAGAATGATCGTATTATGAAGATCGTGGAG
AGACAGCAGGATCCCATGGAACCGCCTAAGTTCAAGCACAAGAAGATCCC
TCGCGGTCCGCCGTCGCCGCCTCCGCCGGTTATGCATTCGCCGCCGAGGA
AGCTCACGGCTGAGGATCAGGAAGCGTGGAGGATCCCGCCGCCTGTGTCG
AATTGGAAGAATCCTAAGGGTTACACGGTTCCGTTGGATAAGCGGTTGGC
GGCTGATGGACGCGGGCTGCAGGATGTGTCGATCAACGATAAGTTCGCGC
AGTTCGCGGAGGCGCTGTTTACGGCGGATCGGCACGCCAGAGAGGAGGTC
AGGCTGCGTGCTCAGATGCAGCAGAAGCTGGCGGAGAAGGAGAAGGCCCA
GAAGGAGGAGCATCTGCGCGCGTTGGCTCAGAAGGCCCGCGAGGAGCGTG
CAGCTGCTGGTAGCAGTCGGCGCGATTCTCGTGCCGGATCTCGCTCGCCG
TCGCGTAGCGTCAGCCGCAGCCCGTCGCCGTACTCGGCTAGTGAGGATGA
GGATGCTGCTCGGGAGCGGGAGCGCGCGCGTCGTGAGCGTCGTCAGGAGG
CGGAGAGACAACTCCGCCAGTCGCGGATGGGTACGGAGAGACGCATCCAG
ATGATGGCACGCGAGCAGAACCGGGATATTTCCGAGAAGGTGGCGCTGGG
ATTGGCCAAGCCGACGCAGGCATCCGAATCAATGTATGACTCGCGTCTGT
TCAATCAGACGAGCGGGATGGACTCGGGCTTCAACGAGGATAACCCGTAC
GACAAACCGCTGTTTGCCGCGCAGGAAGCCATTAACAGCATCTACCGTCC
ACGGGCGCAGGCGGATGACGATGACGGCGAAGGCGCCGAGGGCGAGATGA
GCAAGATCCAGAAACAGAACCGGTTCGAGGTGCTCGGTAGAGCGAAGGAA
GGGTTCCGCGGCGCTGACATAGCTGAGGTGAGTCTATGCGTCCTCTTACT
CCACCGTACTCAAGAAATATACGCTAACTGATCCCCACAATTAGGCTCGT
GATGGCCCCGTGCAATTCGAAAAAGATACCACTGACCCCTTCGGCATCGA
CAGCATGATCGCCGACGTCACTGGCTCCGGTGCAGGCCAAAAGCGCTATG
GTATCCAGGAAGTCGACCGTTCGGAACGGGGCTCCAAACGGGCGCGTGTC
GATGATGATTAA
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Coding sequence (CDS) from alignment at OGUI01000002.1:474068..475979-

>ATCC64974_8960-T1 ID=ATCC64974_8960-T1|Name=ATCC64974_8960-T1|organism=Aspergillus niger N402|type=CDS|length=5229bp|location=Sequence derived from alignment at OGUI01000002.1:474068..475979- (Aspergillus niger N402)
GCTCGTGATGGCCCCGTGCAATTCGAAAAAGATACCACTGACCCCTTCGG
CATCGACAGCATGATCGCCGACGTCACTGGCTCCGGTGCAGGCCAAAAGC
GCTATGGTATCCAGGAAGTCGACCGTTCGGAACGGGGCTCCAAACGGGCG
CGTGTCGATGATGATTAAAGAACCGGGCCCCCTCCCTACCAGAACCGAGC
CGGATGGCGGCCCCGCGCCCCCGAAGACTTCGGCGATGGCGGCGCGTTCC
CCGAGATTCTAGTCGCGCAGTACCCGCTCGATATGGGCCGGAAGGGCACA
TCATCGACATCGAACGCCCTAGCCGTGCAAGTCGACGCCGAGGGAAAAGT
CAAATACGATGCTATCGCGCGCCGCGGACACAGCGACAACCGGATCGTGC
ATGCCTCCTTTAAGGATCTGATTCCGCTGCGCCAGCGCGTCGATATGGGC
GAGGTGTCATTGGACCGGCCGTCGGAGGAAGAAGTCCAGGCGCAGATGGA
GAAGACAAAGAACGCGCTCGCCAGCTTAGTGGAGGGTGCGGCGGCGGCGC
AGAAGCCTAAGAATGTGAAGGGCGGGCGGCGAGCGGAACCTACGTTTGTG
AGGTATACGCCGGCTAATCAGATGGGTGATACGTCGAAGAAGAATGATCG
TATTATGAAGATCGTGGAGAGACAGCAGGATCCCATGGAACCGCCTAAGT
TCAAGCACAAGAAGATCCCTCGCGGTCCGCCGTCGCCGCCTCCGCCGGTT
ATGCATTCGCCGCCGAGGAAGCTCACGGCTGAGGATCAGGAAGCGTGGAG
GATCCCGCCGCCTGTGTCGAATTGGAAGAATCCTAAGGGTTACACGGTTC
CGTTGGATAAGCGGTTGGCGGCTGATGGACGCGGGCTGCAGGATGTGTCG
ATCAACGATAAGTTCGCGCAGTTCGCGGAGGCGCTGTTTACGGCGGATCG
GCACGCCAGAGAGGAGGTCAGGCTGCGTGCTCAGATGCAGCAGAAGCTGG
CGGAGAAGGAGAAGGCCCAGAAGGAGGAGCATCTGCGCGCGTTGGCTCAG
AAGGCCCGCGAGGAGCGTGCAGCTGCTGGTAGCAGTCGGCGCGATTCTCG
TGCCGGATCTCGCTCGCCGTCGCGTAGCGTCAGCCGCAGCCCGTCGCCGT
ACTCGGCTAGTGAGGATGAGGATGCTGCTCGGGAGCGGGAGCGCGCGCGT
CGTGAGCGTCGTCAGGAGGCGGAGAGACAACTCCGCCAGTCGCGGATGGG
TACGGAGAGACGCATCCAGATGATGGCACGCGAGCAGAACCGGGATATTT
CCGAGAAGGTGGCGCTGGGATTGGCCAAGCCGACGCAGGCATCCGAATCA
ATGTATGACTCGCGTCTGTTCAATCAGACGAGCGGGATGGACTCGGGCTT
CAACGAGGATAACCCGTACGACAAACCGCTGTTTGCCGCGCAGGAAGCCA
TTAACAGCATCTACCGTCCACGGGCGCAGGCGGATGACGATGACGGCGAA
GGCGCCGAGGGCGAGATGAGCAAGATCCAGAAACAGAACCGGTTCGAGGT
GCTCGGTAGAGCGAAGGAAGGGTTCCGCGGCGCTGACATAGCTGAGATGG
CATCCATAGCGGAGGGCCTATTCAAGTCTCTTCCCAAGCCGAAATACACC
GGCGAGGAGGAAGAGCTACCACAACATGCACAACCCCGAGGTCCGCGGGT
CGTAGGCCCGGGACAACTCGACGAAACACAGATTGTTCTCCGGGCTCGTG
ATGGCCCCGTGCAATTCGAAAAAGATACCACTGACCCCTTCGGCATCGAC
AGCATGATCGCCGACGTCACTGGCTCCGGTGCAGGCCAAAAGCGCTATGG
TATCCAGGAAGTCGACCGTTCGGAACGGGGCTCCAAACGGGCGCGTGTCG
ATGATGATTAAAGAACCGGGCCCCCTCCCTACCAGAACCGAGCCGGATGG
CGGCCCCGCGCCCCCGAAGACTTCGGCGATGGCGGCGCGTTCCCCGAGAT
TCTAGTCGCGCAGTACCCGCTCGATATGGGCCGGAAGGGCACATCATCGA
CATCGAACGCCCTAGCCGTGCAAGTCGACGCCGAGGGAAAAGTCAAATAC
GATGCTATCGCGCGCCGCGGACACAGCGACAACCGGATCGTGCATGCCTC
CTTTAAGGATCTGATTCCGCTGCGCCAGCGCGTCGATATGGGCGAGGTGT
CATTGGACCGGCCGTCGGAGGAAGAAGTCCAGGCGCAGATGGAGAAGACA
AAGAACGCGCTCGCCAGCTTAGTGGAGGGTGCGGCGGCGGCGCAGAAGCC
TAAGAATGTGAAGGGCGGGCGGCGAGCGGAACCTACGTTTGTGAGGTATA
CGCCGGCTAATCAGATGGGTGATACGTCGAAGAAGAATGATCGTATTATG
AAGATCGTGGAGAGACAGCAGGATCCCATGGAACCGCCTAAGTTCAAGCA
CAAGAAGATCCCTCGCGGTCCGCCGTCGCCGCCTCCGCCGGTTATGCATT
CGCCGCCGAGGAAGCTCACGGCTGAGGATCAGGAAGCGTGGAGGATCCCG
CCGCCTGTGTCGAATTGGAAGAATCCTAAGGGTTACACGGTTCCGTTGGA
TAAGCGGTTGGCGGCTGATGGACGCGGGCTGCAGGATGTGTCGATCAACG
ATAAGTTCGCGCAGTTCGCGGAGGCGCTGTTTACGGCGGATCGGCACGCC
AGAGAGGAGGTCAGGCTGCGTGCTCAGATGCAGCAGAAGCTGGCGGAGAA
GGAGAAGGCCCAGAAGGAGGAGCATCTGCGCGCGTTGGCTCAGAAGGCCC
GCGAGGAGCGTGCAGCTGCTGGTAGCAGTCGGCGCGATTCTCGTGCCGGA
TCTCGCTCGCCGTCGCGTAGCGTCAGCCGCAGCCCGTCGCCGTACTCGGC
TAGTGAGGATGAGGATGCTGCTCGGGAGCGGGAGCGCGCGCGTCGTGAGC
GTCGTCAGGAGGCGGAGAGACAACTCCGCCAGTCGCGGATGGGTACGGAG
AGACGCATCCAGATGATGGCACGCGAGCAGAACCGGGATATTTCCGAGAA
GGTGGCGCTGGGATTGGCCAAGCCGACGCAGGCATCCGAATCAATGTATG
ACTCGCGTCTGTTCAATCAGACGAGCGGGATGGACTCGGGCTTCAACGAG
GATAACCCGTACGACAAACCGCTGTTTGCCGCGCAGGAAGCCATTAACAG
CATCTACCGTCCACGGGCGCAGGCGGATGACGATGACGGCGAAGGCGCCG
AGGGCGAGATGAGCAAGATCCAGAAACAGAACCGGTTCGAGGTGCTCGGT
AGAGCGAAGGAAGGGTTCCGCGGCGCTGACATAGCTGAGATGGCATCCAT
AGCGGAGGGCCTATTCAAGTCTCTTCCCAAGCCGAAATACACCGGCGAGG
AGGAAGAGCTACCACAACATGCACAACCCCGAGGTCCGCGGGTCGTAGGC
CCGGGACAACTCGACGAAACACAGATTGTTCTCCGGGCTCGTGATGGCCC
CGTGCAATTCGAAAAAGATACCACTGACCCCTTCGGCATCGACAGCATGA
TCGCCGACGTCACTGGCTCCGGTGCAGGCCAAAAGCGCTATGGTATCCAG
GAAGTCGACCGTTCGGAACGGGGCTCCAAACGGGCGCGTGTCGATGATGA
TTAAAGAACCGGGCCCCCTCCCTACCAGAACCGAGCCGGATGGCGGCCCC
GCGCCCCCGAAGACTTCGGCGATGGCGGCGCGTTCCCCGAGATTCTAGTC
GCGCAGTACCCGCTCGATATGGGCCGGAAGGGCACATCATCGACATCGAA
CGCCCTAGCCGTGCAAGTCGACGCCGAGGGAAAAGTCAAATACGATGCTA
TCGCGCGCCGCGGACACAGCGACAACCGGATCGTGCATGCCTCCTTTAAG
GATCTGATTCCGCTGCGCCAGCGCGTCGATATGGGCGAGGTGTCATTGGA
CCGGCCGTCGGAGGAAGAAGTCCAGGCGCAGATGGAGAAGACAAAGAACG
CGCTCGCCAGCTTAGTGGAGGGTGCGGCGGCGGCGCAGAAGCCTAAGAAT
GTGAAGGGCGGGCGGCGAGCGGAACCTACGTTTGTGAGGTATACGCCGGC
TAATCAGATGGGTGATACGTCGAAGAAGAATGATCGTATTATGAAGATCG
TGGAGAGACAGCAGGATCCCATGGAACCGCCTAAGTTCAAGCACAAGAAG
ATCCCTCGCGGTCCGCCGTCGCCGCCTCCGCCGGTTATGCATTCGCCGCC
GAGGAAGCTCACGGCTGAGGATCAGGAAGCGTGGAGGATCCCGCCGCCTG
TGTCGAATTGGAAGAATCCTAAGGGTTACACGGTTCCGTTGGATAAGCGG
TTGGCGGCTGATGGACGCGGGCTGCAGGATGTGTCGATCAACGATAAGTT
CGCGCAGTTCGCGGAGGCGCTGTTTACGGCGGATCGGCACGCCAGAGAGG
AGGTCAGGCTGCGTGCTCAGATGCAGCAGAAGCTGGCGGAGAAGGAGAAG
GCCCAGAAGGAGGAGCATCTGCGCGCGTTGGCTCAGAAGGCCCGCGAGGA
GCGTGCAGCTGCTGGTAGCAGTCGGCGCGATTCTCGTGCCGGATCTCGCT
CGCCGTCGCGTAGCGTCAGCCGCAGCCCGTCGCCGTACTCGGCTAGTGAG
GATGAGGATGCTGCTCGGGAGCGGGAGCGCGCGCGTCGTGAGCGTCGTCA
GGAGGCGGAGAGACAACTCCGCCAGTCGCGGATGGGTACGGAGAGACGCA
TCCAGATGATGGCACGCGAGCAGAACCGGGATATTTCCGAGAAGGTGGCG
CTGGGATTGGCCAAGCCGACGCAGGCATCCGAATCAATGTATGACTCGCG
TCTGTTCAATCAGACGAGCGGGATGGACTCGGGCTTCAACGAGGATAACC
CGTACGACAAACCGCTGTTTGCCGCGCAGGAAGCCATTAACAGCATCTAC
CGTCCACGGGCGCAGGCGGATGACGATGACGGCGAAGGCGCCGAGGGCGA
GATGAGCAAGATCCAGAAACAGAACCGGTTCGAGGTGCTCGGTAGAGCGA
AGGAAGGGTTCCGCGGCGCTGACATAGCTGAGATGGCATCCATAGCGGAG
GGCCTATTCAAGTCTCTTCCCAAGCCGAAATACACCGGCGAGGAGGAAGA
GCTACCACAACATGCACAACCCCGAGGTCCGCGGGTCGTAGGCCCGGGAC
AACTCGACGAAACACAGATTGTTCTCCGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005681spliceosomal complex
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PRP45ATCC64974_8960Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_8960-T1ATCC64974_8960-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_8960-T1.cdsATCC64974_8960-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_8960-T1.exon3ATCC64974_8960-T1.exon3Aspergillus niger N402exon
ATCC64974_8960-T1.exon2ATCC64974_8960-T1.exon2Aspergillus niger N402exon
ATCC64974_8960-T1.exon1ATCC64974_8960-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09264DT4
DBxrefInterPro:IPR004015
DBxrefPFAM:PF02731
ProductmRNA splicing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000002.1supercontigOGUI01000002.1:474068..475979 -
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