You are here

Home

ATCC64974_89990-T1, ATCC64974_89990-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_89990-T1
Unique NameATCC64974_89990-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:1020033..1021292-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_89990-T1 ID=ATCC64974_89990-T1|Name=ATCC64974_89990-T1|organism=Aspergillus niger N402|type=mRNA|length=1260bp|location=Sequence derived from alignment at OGUI01000016.1:1020033..1021292- (Aspergillus niger N402)
ATGGAAGAATCATTGGCACCCTTTTTGCAATATACAGAGAAGGACCGTCG
GTGAGCTGCTCCTGCTCCTTAACGAAGTTCCGATCCAATAACTAAACCTA
GTGGCCGCTTGCAATAGGTCTGACGCGCCTGCCTTGTCACTCGCCCTTCA
AGGTCCGAAAACACTGTCACGCACGGCCCCATACCTATTTCATGTGACCC
TACAGCGGGTGGATGAGGTTAGCCAATACTGTGTCTTTGCATGGTACCCG
CAGACCCATGGCTTTGCTACCTCAAACGGATTCATTCTCCTTCATCGTAC
CGCGCAGGACGAGCTGCACCCAGTCAAACTCCCCGAGTACACCACACTCC
CCCAACTAGAACATTGGCACTTCTCCCCTTACCATTGCCATAAGCCCGGT
AACGTCCAGCAATATTACGACGTCATTCCCGACCATATTATTCCATACCT
ACAGACGGGCGAGAGATATGTACTCCTCTGGCCCGGTCAACAATATGGCT
CATGGAATTGGACCGACAAAGTAGAAAACTCTAAAGTCGTCTTGCCAGGC
GGGCCCTTCTTATCCTTCACGGTCGAGGATGATGAGAACAGACCGATCGT
GCCGACGTTGATCTCCGGGTAAGAATCTTCCTTGCTCCTCTTCTGCTTGT
ACTACCCCCAGAGCACACGCTAAGCTCCCTACGCACCCATCTGTTTAGAG
CGCAAGAATGCTGTCCCACTCTGATTGCAAAAATCGAATGTTGCTCTCAG
AGCCAGGTGGCTTTACAGGATGACCTCATGCTTGCGACCCTTCATGTGAC
GTACGTGCCAACAAGTGGTAGCGGTGGTAGGCCATTTACTTTCAACACGG
CAGGTTTGAACGTCGGGCTCTGGGTTTGGCGGGAACGGTGGGTCAGTCTG
AAAGGGTTCGTCTGCGGTGGAGGATGGGCATTCGTCGATGACCCCGATAT
GCAAGTTTCGCCAGGCCGCGATAAGGACTTTGCCAGTCTGCGTCCAGGAG
AAACGTGGTCCGAGGTCTTGCGGATTCCCTTGCTCACGGACATGGAGAGC
AACGATGGCGGGGAAGTCCGAGTCGGGGAGGGGATCCGGTGTCTCTTCAA
GGGCCTCGAGCTCGACTGGTGGGTTTGGGGAAGTCGGGAGGACCTTTTGG
AGACGACAGTCACAATTCCAGCCACGGGAAGCTGGACGGTACGGGAGCCG
GGCGAACAGCCCAACGTTTTCATTCCTGCGGCGGCGCCCGTGGATTTGGA
GATTGTATAG
back to top

Coding sequence (CDS) from alignment at OGUI01000016.1:1020033..1021292-

>ATCC64974_89990-T1 ID=ATCC64974_89990-T1|Name=ATCC64974_89990-T1|organism=Aspergillus niger N402|type=CDS|length=3339bp|location=Sequence derived from alignment at OGUI01000016.1:1020033..1021292- (Aspergillus niger N402)
AGCGCAAGAATGCTGTCCCACTCTGATTGCAAAAATCGAATGTTGCTCTC
AGAGCCAGGTGGCTTTACAGGATGACCTCATGCTTGCGACCCTTCATGTG
ACGTACGTGCCAACAAGTGGTAGCGGTGGTAGGCCATTTACTTTCAACAC
GGCAGGTTTGAACGTCGGGCTCTGGGTTTGGCGGGAACGGTGGGTCAGTC
TGAAAGGGTTCGTCTGCGGTGGAGGATGGGCATTCGTCGATGACCCCGAT
ATGCAAGTTTCGCCAGGCCGCGATAAGGACTTTGCCAGTCTGCGTCCAGG
AGAAACGTGGTCCGAGGTCTTGCGGATTCCCTTGCTCACGGACATGGAGA
GCAACGATGGCGGGGAAGTCCGAGTCGGGGAGGGGATCCGGTGTCTCTTC
AAGGGCCTCGAGCTCGACTGGTGGGTTTGGGGAAGTCGGGAGGACCTTTT
GGAGACGACAGTCACAATTCCAGCCACGGGAAGCTGGACGGTACGGGAGC
CGGGCGAACAGCCCAACGTTTTCATTCCTGCGGCGGCGCCCGTGGATTTG
GAGATTGTATAGGTCTGACGCGCCTGCCTTGTCACTCGCCCTTCAAGGTC
CGAAAACACTGTCACGCACGGCCCCATACCTATTTCATGTGACCCTACAG
CGGGTGGATGAGGTTAGCCAATACTGTGTCTTTGCATGGTACCCGCAGAC
CCATGGCTTTGCTACCTCAAACGGATTCATTCTCCTTCATCGTACCGCGC
AGGACGAGCTGCACCCAGTCAAACTCCCCGAGTACACCACACTCCCCCAA
CTAGAACATTGGCACTTCTCCCCTTACCATTGCCATAAGCCCGGTAACGT
CCAGCAATATTACGACGTCATTCCCGACCATATTATTCCATACCTACAGA
CGGGCGAGAGATATGTACTCCTCTGGCCCGGTCAACAATATGGCTCATGG
AATTGGACCGACAAAGTAGAAAACTCTAAAGTCGTCTTGCCAGGCGGGCC
CTTCTTATCCTTCACGGTCGAGGATGATGAGAACAGACCGATCGTGCCGA
CGTTGATCTCCGGATGGAAGAATCATTGGCACCCTTTTTGCAATATACAG
AGAAGGACCGTCGAGCGCAAGAATGCTGTCCCACTCTGATTGCAAAAATC
GAATGTTGCTCTCAGAGCCAGGTGGCTTTACAGGATGACCTCATGCTTGC
GACCCTTCATGTGACGTACGTGCCAACAAGTGGTAGCGGTGGTAGGCCAT
TTACTTTCAACACGGCAGGTTTGAACGTCGGGCTCTGGGTTTGGCGGGAA
CGGTGGGTCAGTCTGAAAGGGTTCGTCTGCGGTGGAGGATGGGCATTCGT
CGATGACCCCGATATGCAAGTTTCGCCAGGCCGCGATAAGGACTTTGCCA
GTCTGCGTCCAGGAGAAACGTGGTCCGAGGTCTTGCGGATTCCCTTGCTC
ACGGACATGGAGAGCAACGATGGCGGGGAAGTCCGAGTCGGGGAGGGGAT
CCGGTGTCTCTTCAAGGGCCTCGAGCTCGACTGGTGGGTTTGGGGAAGTC
GGGAGGACCTTTTGGAGACGACAGTCACAATTCCAGCCACGGGAAGCTGG
ACGGTACGGGAGCCGGGCGAACAGCCCAACGTTTTCATTCCTGCGGCGGC
GCCCGTGGATTTGGAGATTGTATAGGTCTGACGCGCCTGCCTTGTCACTC
GCCCTTCAAGGTCCGAAAACACTGTCACGCACGGCCCCATACCTATTTCA
TGTGACCCTACAGCGGGTGGATGAGGTTAGCCAATACTGTGTCTTTGCAT
GGTACCCGCAGACCCATGGCTTTGCTACCTCAAACGGATTCATTCTCCTT
CATCGTACCGCGCAGGACGAGCTGCACCCAGTCAAACTCCCCGAGTACAC
CACACTCCCCCAACTAGAACATTGGCACTTCTCCCCTTACCATTGCCATA
AGCCCGGTAACGTCCAGCAATATTACGACGTCATTCCCGACCATATTATT
CCATACCTACAGACGGGCGAGAGATATGTACTCCTCTGGCCCGGTCAACA
ATATGGCTCATGGAATTGGACCGACAAAGTAGAAAACTCTAAAGTCGTCT
TGCCAGGCGGGCCCTTCTTATCCTTCACGGTCGAGGATGATGAGAACAGA
CCGATCGTGCCGACGTTGATCTCCGGATGGAAGAATCATTGGCACCCTTT
TTGCAATATACAGAGAAGGACCGTCGAGCGCAAGAATGCTGTCCCACTCT
GATTGCAAAAATCGAATGTTGCTCTCAGAGCCAGGTGGCTTTACAGGATG
ACCTCATGCTTGCGACCCTTCATGTGACGTACGTGCCAACAAGTGGTAGC
GGTGGTAGGCCATTTACTTTCAACACGGCAGGTTTGAACGTCGGGCTCTG
GGTTTGGCGGGAACGGTGGGTCAGTCTGAAAGGGTTCGTCTGCGGTGGAG
GATGGGCATTCGTCGATGACCCCGATATGCAAGTTTCGCCAGGCCGCGAT
AAGGACTTTGCCAGTCTGCGTCCAGGAGAAACGTGGTCCGAGGTCTTGCG
GATTCCCTTGCTCACGGACATGGAGAGCAACGATGGCGGGGAAGTCCGAG
TCGGGGAGGGGATCCGGTGTCTCTTCAAGGGCCTCGAGCTCGACTGGTGG
GTTTGGGGAAGTCGGGAGGACCTTTTGGAGACGACAGTCACAATTCCAGC
CACGGGAAGCTGGACGGTACGGGAGCCGGGCGAACAGCCCAACGTTTTCA
TTCCTGCGGCGGCGCCCGTGGATTTGGAGATTGTATAGGTCTGACGCGCC
TGCCTTGTCACTCGCCCTTCAAGGTCCGAAAACACTGTCACGCACGGCCC
CATACCTATTTCATGTGACCCTACAGCGGGTGGATGAGGTTAGCCAATAC
TGTGTCTTTGCATGGTACCCGCAGACCCATGGCTTTGCTACCTCAAACGG
ATTCATTCTCCTTCATCGTACCGCGCAGGACGAGCTGCACCCAGTCAAAC
TCCCCGAGTACACCACACTCCCCCAACTAGAACATTGGCACTTCTCCCCT
TACCATTGCCATAAGCCCGGTAACGTCCAGCAATATTACGACGTCATTCC
CGACCATATTATTCCATACCTACAGACGGGCGAGAGATATGTACTCCTCT
GGCCCGGTCAACAATATGGCTCATGGAATTGGACCGACAAAGTAGAAAAC
TCTAAAGTCGTCTTGCCAGGCGGGCCCTTCTTATCCTTCACGGTCGAGGA
TGATGAGAACAGACCGATCGTGCCGACGTTGATCTCCGGATGGAAGAATC
ATTGGCACCCTTTTTGCAATATACAGAGAAGGACCGTCG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_89990ATCC64974_89990Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_89990-T1ATCC64974_89990-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_89990-T1.cdsATCC64974_89990-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_89990-T1.exon3ATCC64974_89990-T1.exon3Aspergillus niger N402exon
ATCC64974_89990-T1.exon2ATCC64974_89990-T1.exon2Aspergillus niger N402exon
ATCC64974_89990-T1.exon1ATCC64974_89990-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000161.6
NoteEggNog:ENOG41
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:1020033..1021292 -
Powered by Drupal